Strain Fitness in Variovorax sp. OAS795 around ABID97_RS23225

Experiment: Glucuronamide (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucuronamide (C)
4,798,544	-		ABID97_RS23220	0.50	-1.1
4,799,063	-		ABID97_RS23220	0.86	-0.7
4,799,197	+				-0.4
4,799,198	-				-2.8
4,799,198	-				-1.0
4,799,227	+				-1.3
4,799,228	-				-1.7
4,799,228	-				-4.2
4,799,435	+				-1.2
4,799,435	+				-0.4
4,799,435	+				-2.2
4,799,435	+				+1.6
4,799,684	+				-1.7
4,799,768	+				-1.6
4,799,768	+				-3.0
4,799,769	-				-1.4
4,799,769	-				-3.5
4,799,769	-				-4.2
4,799,859	-		ABID97_RS23225	0.12	-1.5
4,799,859	-		ABID97_RS23225	0.12	-0.9
4,800,009	-		ABID97_RS23225	0.15	-2.0
4,800,273	-		ABID97_RS23225	0.20	-0.1
4,800,458	+		ABID97_RS23225	0.24	+0.6
4,800,459	-		ABID97_RS23225	0.24	-2.5
4,800,459	-		ABID97_RS23225	0.24	-3.5
4,800,459	-		ABID97_RS23225	0.24	-2.7
4,800,947	+		ABID97_RS23225	0.34	-2.4
4,800,947	+		ABID97_RS23225	0.34	-2.2
4,800,948	-		ABID97_RS23225	0.34	-2.9
4,800,948	-		ABID97_RS23225	0.34	-3.2
4,801,016	+		ABID97_RS23225	0.36	-2.1
4,801,109	+		ABID97_RS23225	0.38	-1.7
4,801,109	+		ABID97_RS23225	0.38	-1.6
4,801,110	-		ABID97_RS23225	0.38	-4.2
4,801,532	+		ABID97_RS23225	0.47	-2.9
4,801,532	+		ABID97_RS23225	0.47	-2.8
4,801,625	+		ABID97_RS23225	0.49	-2.9
4,801,758	-		ABID97_RS23225	0.51	-1.9
4,801,814	+		ABID97_RS23225	0.53	-0.8
4,801,815	-		ABID97_RS23225	0.53	-2.5
4,801,823	+		ABID97_RS23225	0.53	+1.4
4,801,823	+		ABID97_RS23225	0.53	-0.7
4,801,824	-		ABID97_RS23225	0.53	-2.7
4,801,824	-		ABID97_RS23225	0.53	-0.3
4,801,824	-		ABID97_RS23225	0.53	-0.7
4,801,824	-		ABID97_RS23225	0.53	-3.6
4,801,824	-		ABID97_RS23225	0.53	-2.7
4,801,824	-		ABID97_RS23225	0.53	-1.8
4,801,824	-		ABID97_RS23225	0.53	-1.9
4,801,883	+		ABID97_RS23225	0.54	-2.5
4,801,883	+		ABID97_RS23225	0.54	-1.1
4,801,890	-		ABID97_RS23225	0.54	-3.1
4,801,890	-		ABID97_RS23225	0.54	-1.8
4,801,962	-		ABID97_RS23225	0.56	-3.3
4,802,163	+		ABID97_RS23225	0.60	-1.1
4,802,164	-		ABID97_RS23225	0.60	-2.7
4,802,249	+		ABID97_RS23225	0.62	-1.3
4,802,250	-		ABID97_RS23225	0.62	-3.9
4,802,250	-		ABID97_RS23225	0.62	-2.7
4,802,250	-		ABID97_RS23225	0.62	-3.7
4,802,267	+		ABID97_RS23225	0.62	-2.4
4,802,267	+		ABID97_RS23225	0.62	-1.4
4,802,268	-		ABID97_RS23225	0.62	-2.8
4,802,291	+		ABID97_RS23225	0.63	+0.7
4,802,493	-		ABID97_RS23225	0.67	-3.3
4,802,498	+		ABID97_RS23225	0.67	-2.7
4,802,498	+		ABID97_RS23225	0.67	-3.0
4,802,499	-		ABID97_RS23225	0.67	-1.1
4,802,499	-		ABID97_RS23225	0.67	-3.6
4,802,499	-		ABID97_RS23225	0.67	-3.2
4,802,499	-		ABID97_RS23225	0.67	-0.8
4,802,619	-		ABID97_RS23225	0.69	+0.6
4,802,742	-		ABID97_RS23225	0.72	-1.0
4,803,033	-		ABID97_RS23225	0.78	-0.7
4,803,038	+		ABID97_RS23225	0.78	-1.3
4,803,039	-		ABID97_RS23225	0.78	-1.9
4,803,198	-		ABID97_RS23225	0.82	-3.8
4,803,266	+		ABID97_RS23225	0.83	-1.9
4,803,267	-		ABID97_RS23225	0.83	-4.3
4,803,267	-		ABID97_RS23225	0.83	+1.2
4,803,267	-		ABID97_RS23225	0.83	-1.7
4,803,308	+		ABID97_RS23225	0.84	-0.2
4,803,413	+		ABID97_RS23225	0.86	+0.7
4,803,414	-		ABID97_RS23225	0.86	-3.4
4,803,416	+		ABID97_RS23225	0.86	+0.2
4,803,416	+		ABID97_RS23225	0.86	-2.8
4,803,416	+		ABID97_RS23225	0.86	+0.2
4,803,416	+		ABID97_RS23225	0.86	-4.1
4,803,416	+		ABID97_RS23225	0.86	-1.2
4,803,417	-		ABID97_RS23225	0.86	-0.8
4,803,417	-		ABID97_RS23225	0.86	-2.0
4,803,417	-		ABID97_RS23225	0.86	-1.8
4,803,417	-		ABID97_RS23225	0.86	-1.6
4,803,417	-		ABID97_RS23225	0.86	-1.9
4,803,420	+		ABID97_RS23225	0.86	-0.1
4,803,421	-		ABID97_RS23225	0.86	-1.4
4,803,453	-		ABID97_RS23225	0.87	+0.7
4,803,486	-		ABID97_RS23225	0.88	-1.3
4,803,486	-		ABID97_RS23225	0.88	-1.4
4,803,488	+		ABID97_RS23225	0.88	-2.9
4,803,489	-		ABID97_RS23225	0.88	-2.3
4,803,489	-		ABID97_RS23225	0.88	-1.1
4,803,489	-		ABID97_RS23225	0.88	-0.0
4,804,029	-				-1.2
4,804,111	+				-0.0
4,804,428	-		ABID97_RS23230	0.25	-0.0
4,804,470	-		ABID97_RS23230	0.31	-1.1
4,804,514	+		ABID97_RS23230	0.38	-0.1
4,804,514	+		ABID97_RS23230	0.38	-2.0
4,804,515	-		ABID97_RS23230	0.38	+1.1
4,804,589	+		ABID97_RS23230	0.48	-1.4
4,804,589	+		ABID97_RS23230	0.48	-1.1
4,804,589	+		ABID97_RS23230	0.48	-1.6
4,804,589	+		ABID97_RS23230	0.48	-1.1
4,804,590	-		ABID97_RS23230	0.49	-1.1
4,804,641	-		ABID97_RS23230	0.56	-2.2
4,804,688	+		ABID97_RS23230	0.63	-0.8
4,804,697	+		ABID97_RS23230	0.64	-1.9
4,804,697	+		ABID97_RS23230	0.64	-0.9
4,804,698	-		ABID97_RS23230	0.64	-1.7
4,804,787	+		ABID97_RS23230	0.77	-1.6
4,804,787	+		ABID97_RS23230	0.77	+0.4
4,804,787	+		ABID97_RS23230	0.77	+0.2
4,804,787	+		ABID97_RS23230	0.77	-1.4
4,804,787	+		ABID97_RS23230	0.77	-3.2
4,804,787	+		ABID97_RS23230	0.77	-0.9
4,804,788	-		ABID97_RS23230	0.77	-2.8
4,804,788	-		ABID97_RS23230	0.77	-0.9
4,804,788	-		ABID97_RS23230	0.77	-0.3
4,804,788	-		ABID97_RS23230	0.77	-0.7
4,804,788	-		ABID97_RS23230	0.77	-1.5
4,804,788	-		ABID97_RS23230	0.77	-0.8
4,804,788	-		ABID97_RS23230	0.77	-1.4
4,804,788	-		ABID97_RS23230	0.77	-0.7
4,804,788	-		ABID97_RS23230	0.77	-1.7
4,804,788	-		ABID97_RS23230	0.77	+0.6