Experiment: Glucuronamide (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS22965 and ABID97_RS22970 are separated by 29 nucleotides ABID97_RS22970 and ABID97_RS22975 are separated by 93 nucleotides ABID97_RS22975 and ABID97_RS22980 are separated by 29 nucleotides
ABID97_RS22965: ABID97_RS22965 - ClpXP protease specificity-enhancing factor, at 4,752,103 to 4,752,684
_RS22965
ABID97_RS22970: ABID97_RS22970 - glutathione S-transferase N-terminal domain-containing protein, at 4,752,714 to 4,753,325
_RS22970
ABID97_RS22975: ABID97_RS22975 - cytochrome c1, at 4,753,419 to 4,754,192
_RS22975
ABID97_RS22980: ABID97_RS22980 - cytochrome bc complex cytochrome b subunit, at 4,754,222 to 4,755,658
_RS22980
Position (kb) 4753
4754
4755 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4752.552 kb on - strand, within ABID97_RS22965 at 4752.596 kb on + strand, within ABID97_RS22965 at 4752.597 kb on - strand, within ABID97_RS22965 at 4752.597 kb on - strand, within ABID97_RS22965 at 4752.597 kb on - strand, within ABID97_RS22965 at 4752.597 kb on - strand, within ABID97_RS22965 at 4752.597 kb on - strand, within ABID97_RS22965 at 4752.597 kb on - strand, within ABID97_RS22965 at 4752.597 kb on - strand, within ABID97_RS22965 at 4752.715 kb on + strand at 4752.715 kb on + strand at 4752.716 kb on - strand at 4753.421 kb on - strand at 4753.421 kb on - strand at 4753.421 kb on - strand at 4753.421 kb on - strand at 4753.550 kb on - strand, within ABID97_RS22975 at 4753.769 kb on - strand, within ABID97_RS22975 at 4753.772 kb on - strand, within ABID97_RS22975 at 4753.772 kb on - strand, within ABID97_RS22975 at 4753.772 kb on - strand, within ABID97_RS22975 at 4753.784 kb on - strand, within ABID97_RS22975 at 4753.790 kb on - strand, within ABID97_RS22975 at 4753.991 kb on - strand, within ABID97_RS22975 at 4754.027 kb on - strand, within ABID97_RS22975 at 4754.027 kb on - strand, within ABID97_RS22975 at 4754.027 kb on - strand, within ABID97_RS22975 at 4754.410 kb on - strand, within ABID97_RS22980 at 4754.446 kb on - strand, within ABID97_RS22980 at 4754.446 kb on - strand, within ABID97_RS22980 at 4754.452 kb on - strand, within ABID97_RS22980 at 4754.452 kb on - strand, within ABID97_RS22980 at 4754.452 kb on - strand, within ABID97_RS22980 at 4754.452 kb on - strand, within ABID97_RS22980 at 4754.452 kb on - strand, within ABID97_RS22980 at 4754.452 kb on - strand, within ABID97_RS22980 at 4754.452 kb on - strand, within ABID97_RS22980 at 4754.452 kb on - strand, within ABID97_RS22980 at 4754.452 kb on - strand, within ABID97_RS22980 at 4754.452 kb on - strand, within ABID97_RS22980 at 4754.452 kb on - strand, within ABID97_RS22980 at 4754.452 kb on - strand, within ABID97_RS22980 at 4754.452 kb on - strand, within ABID97_RS22980 at 4754.731 kb on - strand, within ABID97_RS22980 at 4754.806 kb on - strand, within ABID97_RS22980 at 4754.818 kb on - strand, within ABID97_RS22980 at 4754.818 kb on - strand, within ABID97_RS22980 at 4754.818 kb on - strand, within ABID97_RS22980 at 4754.902 kb on - strand, within ABID97_RS22980 at 4754.905 kb on - strand, within ABID97_RS22980 at 4754.905 kb on - strand, within ABID97_RS22980 at 4754.905 kb on - strand, within ABID97_RS22980 at 4755.184 kb on - strand, within ABID97_RS22980 at 4755.184 kb on - strand, within ABID97_RS22980
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (C) remove 4,752,552 - ABID97_RS22965 0.77 -0.7 4,752,596 + ABID97_RS22965 0.85 -2.1 4,752,597 - ABID97_RS22965 0.85 -0.8 4,752,597 - ABID97_RS22965 0.85 -0.3 4,752,597 - ABID97_RS22965 0.85 +0.2 4,752,597 - ABID97_RS22965 0.85 -1.3 4,752,597 - ABID97_RS22965 0.85 +0.4 4,752,597 - ABID97_RS22965 0.85 -1.0 4,752,597 - ABID97_RS22965 0.85 -0.3 4,752,715 + +0.2 4,752,715 + -0.4 4,752,716 - -0.3 4,753,421 - -0.3 4,753,421 - -1.5 4,753,421 - +3.5 4,753,421 - -0.1 4,753,550 - ABID97_RS22975 0.17 +0.1 4,753,769 - ABID97_RS22975 0.45 +1.1 4,753,772 - ABID97_RS22975 0.46 -0.0 4,753,772 - ABID97_RS22975 0.46 +1.6 4,753,772 - ABID97_RS22975 0.46 +1.0 4,753,784 - ABID97_RS22975 0.47 +1.2 4,753,790 - ABID97_RS22975 0.48 +1.3 4,753,991 - ABID97_RS22975 0.74 +1.3 4,754,027 - ABID97_RS22975 0.79 +2.0 4,754,027 - ABID97_RS22975 0.79 +0.5 4,754,027 - ABID97_RS22975 0.79 +0.0 4,754,410 - ABID97_RS22980 0.13 +0.3 4,754,446 - ABID97_RS22980 0.16 -0.8 4,754,446 - ABID97_RS22980 0.16 +0.1 4,754,452 - ABID97_RS22980 0.16 +0.0 4,754,452 - ABID97_RS22980 0.16 +0.7 4,754,452 - ABID97_RS22980 0.16 +0.2 4,754,452 - ABID97_RS22980 0.16 +0.2 4,754,452 - ABID97_RS22980 0.16 -1.1 4,754,452 - ABID97_RS22980 0.16 +0.2 4,754,452 - ABID97_RS22980 0.16 +3.5 4,754,452 - ABID97_RS22980 0.16 +0.3 4,754,452 - ABID97_RS22980 0.16 +0.2 4,754,452 - ABID97_RS22980 0.16 +0.2 4,754,452 - ABID97_RS22980 0.16 +1.9 4,754,452 - ABID97_RS22980 0.16 +2.2 4,754,452 - ABID97_RS22980 0.16 -0.0 4,754,731 - ABID97_RS22980 0.35 +0.2 4,754,806 - ABID97_RS22980 0.41 +1.9 4,754,818 - ABID97_RS22980 0.41 +1.7 4,754,818 - ABID97_RS22980 0.41 +0.2 4,754,818 - ABID97_RS22980 0.41 +1.3 4,754,902 - ABID97_RS22980 0.47 +1.7 4,754,905 - ABID97_RS22980 0.48 +2.0 4,754,905 - ABID97_RS22980 0.48 +1.3 4,754,905 - ABID97_RS22980 0.48 +1.6 4,755,184 - ABID97_RS22980 0.67 +0.5 4,755,184 - ABID97_RS22980 0.67 +3.3
Or see this region's nucleotide sequence