Experiment: Glucuronamide (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS06355 and ABID97_RS06360 are separated by 102 nucleotides ABID97_RS06360 and ABID97_RS06365 are separated by 0 nucleotides ABID97_RS06365 and ABID97_RS06370 are separated by 99 nucleotides ABID97_RS06370 and ABID97_RS06375 are separated by 2 nucleotides
ABID97_RS06355: ABID97_RS06355 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase, at 1,341,727 to 1,343,130
_RS06355
ABID97_RS06360: ABID97_RS06360 - hypothetical protein, at 1,343,233 to 1,343,832
_RS06360
ABID97_RS06365: ABID97_RS06365 - TlpA disulfide reductase family protein, at 1,343,833 to 1,344,378
_RS06365
ABID97_RS06370: ABID97_RS06370 - acetyl-CoA carboxylase biotin carboxyl carrier protein, at 1,344,478 to 1,344,939
_RS06370
ABID97_RS06375: ABID97_RS06375 - acetyl-CoA carboxylase biotin carboxylase subunit, at 1,344,942 to 1,346,291
_RS06375
Position (kb) 1343
1344
1345 Strain fitness (log2 ratio) -1
0
1
2 at 1342.844 kb on + strand, within ABID97_RS06355 at 1342.845 kb on - strand, within ABID97_RS06355 at 1342.845 kb on - strand, within ABID97_RS06355 at 1343.028 kb on - strand at 1343.118 kb on + strand at 1343.118 kb on + strand at 1343.118 kb on + strand at 1343.118 kb on + strand at 1343.118 kb on + strand at 1343.118 kb on + strand at 1343.119 kb on - strand at 1343.119 kb on - strand at 1343.119 kb on - strand at 1343.141 kb on + strand at 1343.141 kb on + strand at 1343.142 kb on - strand at 1343.188 kb on - strand at 1343.188 kb on - strand at 1343.226 kb on + strand at 1343.226 kb on + strand at 1343.227 kb on - strand at 1343.227 kb on - strand at 1343.302 kb on + strand, within ABID97_RS06360 at 1343.303 kb on - strand, within ABID97_RS06360 at 1343.303 kb on - strand, within ABID97_RS06360 at 1343.399 kb on - strand, within ABID97_RS06360 at 1343.399 kb on - strand, within ABID97_RS06360 at 1343.399 kb on - strand, within ABID97_RS06360 at 1343.411 kb on - strand, within ABID97_RS06360 at 1343.411 kb on - strand, within ABID97_RS06360 at 1343.548 kb on + strand, within ABID97_RS06360 at 1343.549 kb on - strand, within ABID97_RS06360 at 1343.549 kb on - strand, within ABID97_RS06360 at 1343.549 kb on - strand, within ABID97_RS06360 at 1343.550 kb on + strand, within ABID97_RS06360 at 1343.615 kb on - strand, within ABID97_RS06360 at 1343.722 kb on + strand, within ABID97_RS06360 at 1343.722 kb on + strand, within ABID97_RS06360 at 1343.723 kb on - strand, within ABID97_RS06360 at 1343.723 kb on - strand, within ABID97_RS06360 at 1343.723 kb on - strand, within ABID97_RS06360 at 1343.723 kb on - strand, within ABID97_RS06360 at 1343.723 kb on - strand, within ABID97_RS06360 at 1343.867 kb on - strand at 1343.867 kb on - strand at 1344.255 kb on + strand, within ABID97_RS06365 at 1344.315 kb on + strand, within ABID97_RS06365 at 1344.315 kb on + strand, within ABID97_RS06365 at 1344.386 kb on + strand at 1344.386 kb on + strand at 1344.386 kb on + strand at 1344.386 kb on + strand at 1344.447 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (C) remove 1,342,844 + ABID97_RS06355 0.80 +0.2 1,342,845 - ABID97_RS06355 0.80 -0.8 1,342,845 - ABID97_RS06355 0.80 -1.0 1,343,028 - +0.1 1,343,118 + -0.4 1,343,118 + -0.3 1,343,118 + +0.2 1,343,118 + +0.2 1,343,118 + -1.3 1,343,118 + -0.6 1,343,119 - -0.3 1,343,119 - -0.5 1,343,119 - -0.3 1,343,141 + -0.3 1,343,141 + -0.1 1,343,142 - -0.5 1,343,188 - -0.8 1,343,188 - -0.7 1,343,226 + -0.4 1,343,226 + -0.6 1,343,227 - +0.2 1,343,227 - +1.2 1,343,302 + ABID97_RS06360 0.12 +2.1 1,343,303 - ABID97_RS06360 0.12 -0.2 1,343,303 - ABID97_RS06360 0.12 +0.3 1,343,399 - ABID97_RS06360 0.28 +0.9 1,343,399 - ABID97_RS06360 0.28 +0.8 1,343,399 - ABID97_RS06360 0.28 +0.2 1,343,411 - ABID97_RS06360 0.30 +0.8 1,343,411 - ABID97_RS06360 0.30 -0.3 1,343,548 + ABID97_RS06360 0.53 +1.0 1,343,549 - ABID97_RS06360 0.53 +0.3 1,343,549 - ABID97_RS06360 0.53 +0.6 1,343,549 - ABID97_RS06360 0.53 +0.6 1,343,550 + ABID97_RS06360 0.53 +0.7 1,343,615 - ABID97_RS06360 0.64 +1.0 1,343,722 + ABID97_RS06360 0.81 +0.1 1,343,722 + ABID97_RS06360 0.81 +0.8 1,343,723 - ABID97_RS06360 0.82 +0.1 1,343,723 - ABID97_RS06360 0.82 +0.6 1,343,723 - ABID97_RS06360 0.82 -0.2 1,343,723 - ABID97_RS06360 0.82 -0.2 1,343,723 - ABID97_RS06360 0.82 +0.1 1,343,867 - -1.4 1,343,867 - -1.4 1,344,255 + ABID97_RS06365 0.77 +0.0 1,344,315 + ABID97_RS06365 0.88 -0.1 1,344,315 + ABID97_RS06365 0.88 +0.6 1,344,386 + +1.4 1,344,386 + -0.5 1,344,386 + -0.2 1,344,386 + +0.2 1,344,447 + +0.1
Or see this region's nucleotide sequence