Strain Fitness in Escherichia coli BW25113 around b3822

Experiment: Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.05 mg/ml
4,002,893	-				+0.1
4,002,893	-				+0.1
4,002,894	+				-0.0
4,002,894	+				-0.2
4,002,900	-				-0.6
4,002,908	-				-1.8
4,002,915	+				-0.8
4,002,915	+				-1.1
4,002,924	-				+1.0
4,002,924	-				-0.8
4,002,940	+				+2.2
4,002,946	-				+1.2
4,002,957	+				-0.9
4,002,981	-	pldA	b3821	0.11	+0.0
4,002,981	-	pldA	b3821	0.11	-1.5
4,002,984	+	pldA	b3821	0.11	+0.5
4,003,000	-	pldA	b3821	0.13	-1.5
4,003,000	-	pldA	b3821	0.13	-1.5
4,003,022	+	pldA	b3821	0.16	-0.7
4,003,022	+	pldA	b3821	0.16	+0.4
4,003,050	-	pldA	b3821	0.19	-0.2
4,003,076	+	pldA	b3821	0.22	-0.3
4,003,088	+	pldA	b3821	0.23	+0.7
4,003,250	-	pldA	b3821	0.42	+0.1
4,003,250	-	pldA	b3821	0.42	-0.4
4,003,259	+	pldA	b3821	0.43	-0.8
4,003,261	+	pldA	b3821	0.43	+0.1
4,003,348	+	pldA	b3821	0.53	+1.2
4,003,356	-	pldA	b3821	0.54	-0.6
4,003,359	+	pldA	b3821	0.54	-1.3
4,003,359	+	pldA	b3821	0.54	-2.7
4,003,367	-	pldA	b3821	0.55	+0.4
4,003,367	-	pldA	b3821	0.55	+1.0
4,003,367	-	pldA	b3821	0.55	+0.0
4,003,367	-	pldA	b3821	0.55	-0.7
4,003,389	+	pldA	b3821	0.58	-0.1
4,003,412	-	pldA	b3821	0.61	-1.9
4,003,415	+	pldA	b3821	0.61	-0.1
4,003,415	+	pldA	b3821	0.61	+0.5
4,003,472	+	pldA	b3821	0.67	-0.7
4,003,472	+	pldA	b3821	0.67	-0.7
4,003,476	+	pldA	b3821	0.68	-0.2
4,003,477	-	pldA	b3821	0.68	+0.0
4,003,477	-	pldA	b3821	0.68	+0.2
4,003,480	-	pldA	b3821	0.68	+0.5
4,003,484	-	pldA	b3821	0.69	-0.3
4,003,484	-	pldA	b3821	0.69	+0.2
4,003,489	-	pldA	b3821	0.69	+1.2
4,003,512	+	pldA	b3821	0.72	+0.0
4,003,512	+	pldA	b3821	0.72	+0.5
4,003,586	-	pldA	b3821	0.81	-0.3
4,003,614	+	pldA	b3821	0.84	-1.9
4,003,614	+	pldA	b3821	0.84	-1.4
4,003,616	+	pldA	b3821	0.84	-0.4
4,003,620	+	pldA	b3821	0.84	-0.4
4,003,632	-	pldA	b3821	0.86	+0.2
4,003,632	-	pldA	b3821	0.86	-1.1
4,003,660	-	pldA	b3821	0.89	+0.6
4,003,723	+				-0.9
4,003,731	-				-1.0
4,003,735	+				-0.9
4,003,742	-				-0.4
4,003,993	+				+0.6
4,003,993	+				+0.6
4,003,995	+				+0.4
4,003,995	+				-0.4
4,004,003	-				+3.2
4,004,003	-				+0.2
4,004,028	-				-2.4
4,004,083	+	recQ	b3822	0.11	+1.9
4,004,133	+	recQ	b3822	0.13	-0.4
4,004,197	+	recQ	b3822	0.17	-1.4
4,004,374	-	recQ	b3822	0.27	-1.2
4,004,393	-	recQ	b3822	0.28	-0.8
4,004,436	+	recQ	b3822	0.30	+0.2
4,004,478	-	recQ	b3822	0.32	-0.6
4,004,535	-	recQ	b3822	0.35	-0.2
4,004,568	-				+0.2
4,004,573	-	recQ	b3822	0.37	-0.4
4,004,586	-	recQ	b3822	0.38	-0.1
4,004,586	-	recQ	b3822	0.38	+0.0
4,004,590	+	recQ	b3822	0.38	-0.8
4,004,632	-	recQ	b3822	0.41	+1.2
4,004,632	-	recQ	b3822	0.41	-1.8
4,004,651	+	recQ	b3822	0.42	-1.1
4,004,673	-	recQ	b3822	0.43	-0.4
4,004,740	+	recQ	b3822	0.47	-0.2
4,004,740	+	recQ	b3822	0.47	+0.3
4,004,816	+	recQ	b3822	0.51	-1.4
4,004,816	+	recQ	b3822	0.51	+0.2
4,004,818	+	recQ	b3822	0.51	+0.8
4,004,868	+	recQ	b3822	0.54	+0.5
4,004,868	+	recQ	b3822	0.54	+0.4
4,004,884	+	recQ	b3822	0.54	-0.6
4,004,885	+	recQ	b3822	0.55	+0.4
4,004,908	-	recQ	b3822	0.56	+0.4
4,004,924	-	recQ	b3822	0.57	-1.1
4,004,924	-	recQ	b3822	0.57	-0.7
4,004,938	+	recQ	b3822	0.57	+1.6
4,004,970	-	recQ	b3822	0.59	+0.0
4,004,981	+	recQ	b3822	0.60	+0.8
4,004,981	+	recQ	b3822	0.60	-0.0
4,005,039	-	recQ	b3822	0.63	-0.6
4,005,064	+	recQ	b3822	0.64	-1.0
4,005,072	-	recQ	b3822	0.65	+0.8
4,005,103	+	recQ	b3822	0.66	+0.1
4,005,119	-	recQ	b3822	0.67	-0.1
4,005,129	-	recQ	b3822	0.68	-0.1
4,005,138	-	recQ	b3822	0.68	-1.1
4,005,146	+	recQ	b3822	0.69	-1.1
4,005,192	-	recQ	b3822	0.71	-0.1
4,005,198	+	recQ	b3822	0.72	-0.8
4,005,219	-	recQ	b3822	0.73	+0.9
4,005,219	-	recQ	b3822	0.73	-0.4
4,005,226	+	recQ	b3822	0.73	+0.2
4,005,226	+	recQ	b3822	0.73	-0.7
4,005,237	+	recQ	b3822	0.74	-1.4
4,005,245	+	recQ	b3822	0.74	+0.5
4,005,245	+	recQ	b3822	0.74	-0.4
4,005,366	-	recQ	b3822	0.81	-0.4
4,005,387	+	recQ	b3822	0.82	+0.4
4,005,389	+	recQ	b3822	0.82	-0.8
4,005,389	+	recQ	b3822	0.82	-2.0
4,005,481	+	recQ	b3822	0.87	+0.6
4,005,555	+				-0.0
4,005,556	-				-0.7
4,005,557	+				+0.5
4,005,573	-				+0.2
4,005,573	-				-0.8
4,005,618	-				+0.2
4,005,622	+				+1.6
4,005,622	+				+0.4
4,005,631	+				-0.2
4,005,664	-				+0.5
4,005,675	+				-0.3
4,005,675	+				+0.6
4,005,817	+				+1.5
4,005,865	-	rhtC	b3823	0.14	+0.6
4,005,997	-	rhtC	b3823	0.35	+0.5
4,005,998	+	rhtC	b3823	0.35	-0.6
4,006,017	+	rhtC	b3823	0.38	-0.4
4,006,051	+	rhtC	b3823	0.44	-1.8
4,006,103	+	rhtC	b3823	0.52	+0.5
4,006,208	+	rhtC	b3823	0.69	-1.1
4,006,244	+	rhtC	b3823	0.75	+0.2
4,006,244	+	rhtC	b3823	0.75	-0.6
4,006,275	-	rhtC	b3823	0.80	-0.1
4,006,304	+	rhtC	b3823	0.84	-0.3
4,006,323	-	rhtC	b3823	0.87	+0.4
4,006,331	+	rhtC	b3823	0.89	-0.1
4,006,420	-				-1.6
4,006,421	-				-0.9
4,006,443	-				+1.2
4,006,480	+				+1.2
4,006,480	+				+0.1
4,006,486	-				-1.8
4,006,489	-				-0.6
4,006,491	+				+0.2
4,006,501	+				+0.0
4,006,501	-				+0.0
4,006,501	-				+0.6
4,006,528	-	rhtB	b3824	0.11	+0.1
4,006,542	+	rhtB	b3824	0.13	+0.2
4,006,545	-	rhtB	b3824	0.13	+0.4
4,006,558	+	rhtB	b3824	0.15	-2.7
4,006,566	-	rhtB	b3824	0.17	-0.6
4,006,602	+	rhtB	b3824	0.23	+0.1
4,006,602	+	rhtB	b3824	0.23	-0.4
4,006,610	-	rhtB	b3824	0.24	+0.2
4,006,622	-	rhtB	b3824	0.26	+0.2
4,006,622	-	rhtB	b3824	0.26	+0.5
4,006,627	-	rhtB	b3824	0.27	-0.4
4,006,627	-	rhtB	b3824	0.27	+0.2
4,006,638	+	rhtB	b3824	0.28	-0.4
4,006,638	+	rhtB	b3824	0.28	-1.5
4,006,640	+	rhtB	b3824	0.29	-0.3
4,006,645	-	rhtB	b3824	0.29	+0.3
4,006,645	-	rhtB	b3824	0.29	+0.4
4,006,646	-	rhtB	b3824	0.30	-0.6