Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4673

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
5,594,570	-				+3.7
5,594,690	+				+0.2
5,594,690	+				-3.1
5,594,690	+				-2.7
5,594,690	+				-0.5
5,594,691	-				-0.2
5,594,692	+				+2.1
5,594,692	+				-1.5
5,594,692	+				-0.2
5,594,698	+				+1.2
5,594,698	+				+0.2
5,594,698	+				+0.1
5,594,698	+				-0.2
5,594,723	+				-0.9
5,594,723	+				+0.8
5,594,724	-				-0.7
5,594,724	-				-0.3
5,594,770	-				+1.8
5,594,770	-				+0.1
5,594,986	-		Echvi_4673	0.19	-1.7
5,594,992	+		Echvi_4673	0.20	+0.4
5,595,000	+		Echvi_4673	0.20	-1.5
5,595,076	-		Echvi_4673	0.25	-1.1
5,595,100	+		Echvi_4673	0.27	-0.1
5,595,100	+		Echvi_4673	0.27	-0.3
5,595,144	+		Echvi_4673	0.30	-0.3
5,595,146	+		Echvi_4673	0.30	+1.0
5,595,146	+		Echvi_4673	0.30	-1.8
5,595,177	-		Echvi_4673	0.32	+2.1
5,595,177	-		Echvi_4673	0.32	+2.1
5,595,288	-		Echvi_4673	0.40	+0.7
5,595,293	+		Echvi_4673	0.40	-1.8
5,595,293	+		Echvi_4673	0.40	-0.5
5,595,293	+		Echvi_4673	0.40	+0.6
5,595,294	-		Echvi_4673	0.40	+1.9
5,595,486	+		Echvi_4673	0.53	-0.3
5,595,487	-		Echvi_4673	0.53	-0.0
5,595,487	-		Echvi_4673	0.53	+0.3
5,595,487	-		Echvi_4673	0.53	+1.2
5,595,487	-		Echvi_4673	0.53	+0.6
5,595,652	+		Echvi_4673	0.65	+3.5
5,595,659	+		Echvi_4673	0.65	+0.1
5,595,659	+		Echvi_4673	0.65	-0.3
5,595,660	-		Echvi_4673	0.65	+0.2
5,595,767	-		Echvi_4673	0.73	+0.4
5,595,767	-		Echvi_4673	0.73	+0.2
5,595,771	+		Echvi_4673	0.73	+2.1
5,595,772	-		Echvi_4673	0.73	-1.1
5,595,777	+		Echvi_4673	0.73	+2.5
5,595,804	+		Echvi_4673	0.75	+0.5
5,595,805	-		Echvi_4673	0.75	-0.5
5,595,960	+		Echvi_4673	0.86	-0.2
5,595,960	+		Echvi_4673	0.86	+0.5
5,595,961	-		Echvi_4673	0.86	-0.1
5,595,961	-		Echvi_4673	0.86	+1.3
5,595,961	-		Echvi_4673	0.86	+1.3
5,595,993	+		Echvi_4673	0.88	+0.9
5,595,994	-		Echvi_4673	0.88	-0.5
5,595,994	-		Echvi_4673	0.88	+0.1
5,596,025	+				-0.3
5,596,026	-				-0.4
5,596,040	-				-0.5
5,596,092	+				-0.4
5,596,139	-				-0.5
5,596,152	+				-0.8
5,596,153	-				+0.2
5,596,153	-				-0.8
5,596,171	-				+0.1
5,596,176	-				+0.3
5,596,261	+				-0.7
5,596,386	+		Echvi_4674	0.30	-2.1
5,596,387	-		Echvi_4674	0.30	-0.8
5,596,575	-		Echvi_4674	0.75	-1.3
5,596,726	+				+0.1
5,596,727	-				-1.3
5,596,738	-				-0.1
5,596,768	-				-2.7
5,596,772	+				+0.1
5,596,773	-				-0.5
5,596,773	-				+0.4
5,596,773	-				+0.1
5,596,776	+				-0.7
5,596,777	-				+0.8
5,596,796	-				-0.4
5,596,796	-				-0.6
5,596,796	-				-3.1
5,596,821	+				-0.1
5,596,825	+				-0.8
5,596,825	+				+0.5
5,596,825	+				-0.6
5,596,825	+				-0.2
5,596,873	+				-0.7
5,596,873	+				-1.2
5,596,884	+				-0.5
5,596,884	+				-0.6
5,596,885	-				-0.5
5,596,885	-				-0.3
5,596,886	+				-1.0
5,596,886	+				-0.7
5,596,886	+				+0.6
5,596,886	+				-1.5
5,596,886	+				-0.5
5,596,886	+				+4.1
5,596,886	+				-0.6
5,596,887	-				+1.3
5,596,887	-				+2.1
5,596,887	-				+0.5
5,596,887	-				+0.3
5,596,887	-				-0.2
5,596,887	-				-1.1
5,596,887	-				-1.7
5,596,890	+				+0.1
5,596,890	+				-0.5
5,596,891	-				+0.3
5,596,941	+		Echvi_4675	0.13	-0.7
5,596,941	+		Echvi_4675	0.13	+0.4
5,596,941	+		Echvi_4675	0.13	+0.9
5,596,941	+		Echvi_4675	0.13	+1.2
5,596,942	-		Echvi_4675	0.13	-0.3
5,596,942	-		Echvi_4675	0.13	-0.9
5,596,942	-		Echvi_4675	0.13	-0.1
5,596,942	-		Echvi_4675	0.13	+0.0
5,596,942	-		Echvi_4675	0.13	+0.1
5,597,075	+		Echvi_4675	0.23	+0.5
5,597,145	+		Echvi_4675	0.29	+0.1
5,597,145	+		Echvi_4675	0.29	+1.5
5,597,145	+		Echvi_4675	0.29	+0.0
5,597,145	+		Echvi_4675	0.29	-1.2
5,597,145	+		Echvi_4675	0.29	+0.1
5,597,146	-		Echvi_4675	0.29	-0.2
5,597,147	+		Echvi_4675	0.29	-0.5