Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4542

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
5,431,200	-		Echvi_4541	0.27	+0.1
5,431,217	+		Echvi_4541	0.28	+0.3
5,431,306	-		Echvi_4541	0.37	+0.3
5,431,542	-		Echvi_4541	0.60	+0.5
5,431,681	+		Echvi_4541	0.74	-0.7
5,431,697	-		Echvi_4541	0.75	+1.4
5,431,702	+		Echvi_4541	0.76	-1.9
5,431,719	-		Echvi_4541	0.77	+2.0
5,431,719	-		Echvi_4541	0.77	-0.4
5,431,826	+		Echvi_4541	0.88	+0.2
5,431,826	+		Echvi_4541	0.88	+0.4
5,431,827	-		Echvi_4541	0.88	-1.0
5,431,877	-				+1.7
5,431,941	+				-0.1
5,431,946	+				-0.2
5,431,966	-				-0.5
5,431,977	+				+0.9
5,431,982	+				-0.8
5,431,982	+				+0.1
5,431,984	+				-0.2
5,431,984	+				-0.5
5,431,991	-				+2.2
5,432,024	+				-0.9
5,432,025	-				+0.8
5,432,032	-				+1.8
5,432,091	+				-1.2
5,432,092	-				+1.0
5,432,092	-				+2.1
5,432,185	-				-1.2
5,432,198	-		Echvi_4542	0.10	-1.8
5,432,208	+		Echvi_4542	0.11	-0.1
5,432,209	-		Echvi_4542	0.12	+1.4
5,432,214	+		Echvi_4542	0.12	-0.3
5,432,215	-		Echvi_4542	0.12	+0.5
5,432,215	-		Echvi_4542	0.12	-2.1
5,432,224	+		Echvi_4542	0.13	+0.7
5,432,258	-		Echvi_4542	0.16	+0.8
5,432,426	-		Echvi_4542	0.33	+1.7
5,432,427	+		Echvi_4542	0.33	+0.5
5,432,427	+		Echvi_4542	0.33	+0.8
5,432,428	-		Echvi_4542	0.33	+0.3
5,432,428	-		Echvi_4542	0.33	+0.5
5,432,428	-		Echvi_4542	0.33	+0.1
5,432,428	-		Echvi_4542	0.33	+1.5
5,432,499	+		Echvi_4542	0.40	+0.7
5,432,500	-		Echvi_4542	0.40	-0.4
5,432,500	-		Echvi_4542	0.40	-0.6
5,432,508	+		Echvi_4542	0.41	-0.5
5,432,511	+		Echvi_4542	0.41	+2.8
5,432,512	-		Echvi_4542	0.41	-0.2
5,432,578	+		Echvi_4542	0.47	+0.3
5,432,578	+		Echvi_4542	0.47	+0.1
5,432,579	-		Echvi_4542	0.48	+0.4
5,432,580	+		Echvi_4542	0.48	+0.0
5,432,580	+		Echvi_4542	0.48	-0.3
5,432,639	+		Echvi_4542	0.53	+0.6
5,432,640	-		Echvi_4542	0.53	+0.4
5,432,709	+		Echvi_4542	0.60	-0.5
5,432,709	+		Echvi_4542	0.60	-0.0
5,432,710	-		Echvi_4542	0.60	+0.3
5,432,710	-		Echvi_4542	0.60	-0.1
5,432,710	-		Echvi_4542	0.60	-1.3
5,432,710	-		Echvi_4542	0.60	-0.3
5,432,710	-		Echvi_4542	0.60	-0.9
5,432,757	-		Echvi_4542	0.65	+0.0
5,432,937	+		Echvi_4542	0.82	-0.5
5,432,968	+		Echvi_4542	0.85	-1.3
5,432,971	-		Echvi_4542	0.86	+1.1
5,433,047	-				-0.5
5,433,049	+				-1.2
5,433,049	+				-1.2
5,433,050	-				+1.1
5,433,052	+				-1.8
5,433,052	+				-0.4
5,433,052	+				-1.2
5,433,060	+				-0.9
5,433,128	-				+0.1
5,433,133	+				+1.5
5,433,173	-				-0.0
5,433,292	+				-1.9
5,433,293	-				-0.1
5,433,293	-				+0.4
5,433,293	-				+1.7
5,433,293	-				-0.5
5,433,330	+				+2.1
5,433,330	+				+0.5
5,433,331	-				+0.7
5,433,601	+				-0.1
5,433,648	+				+1.2
5,433,648	+				+0.5
5,433,661	+				+0.8
5,433,662	-				+0.8
5,433,723	+				-0.8
5,433,921	-		Echvi_4543	0.11	-2.3
5,433,974	-		Echvi_4543	0.11	+0.7
5,434,019	+		Echvi_4543	0.12	-0.0
5,434,020	-		Echvi_4543	0.12	-0.0
5,434,088	-		Echvi_4543	0.13	+1.8
5,434,117	-		Echvi_4543	0.13	-1.1
5,434,117	-		Echvi_4543	0.13	-0.1
5,434,117	-		Echvi_4543	0.13	+0.4