Experiment: m.b. Carbenicillin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4491 and Echvi_4492 are separated by 286 nucleotides Echvi_4492 and Echvi_4493 are separated by 299 nucleotides
Echvi_4491: Echvi_4491 - hypothetical protein, at 5,368,828 to 5,369,142
_4491
Echvi_4492: Echvi_4492 - Uncharacterized conserved protein, at 5,369,429 to 5,370,811
_4492
Echvi_4493: Echvi_4493 - Transposase and inactivated derivatives, at 5,371,111 to 5,371,959
_4493
Position (kb) 5369
5370
5371 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5368.488 kb on + strand at 5368.489 kb on - strand at 5368.648 kb on + strand at 5368.648 kb on + strand at 5368.648 kb on + strand at 5368.746 kb on - strand at 5368.750 kb on - strand at 5368.754 kb on + strand at 5368.754 kb on + strand at 5368.759 kb on + strand at 5368.792 kb on - strand at 5368.805 kb on - strand at 5368.805 kb on - strand at 5368.805 kb on - strand at 5368.816 kb on + strand at 5368.816 kb on + strand at 5368.817 kb on - strand at 5368.817 kb on - strand at 5368.817 kb on - strand at 5368.820 kb on + strand at 5368.820 kb on + strand at 5368.848 kb on + strand at 5368.855 kb on + strand at 5368.987 kb on + strand, within Echvi_4491 at 5368.987 kb on + strand, within Echvi_4491 at 5368.988 kb on - strand, within Echvi_4491 at 5368.991 kb on - strand, within Echvi_4491 at 5369.008 kb on - strand, within Echvi_4491 at 5369.036 kb on - strand, within Echvi_4491 at 5369.036 kb on - strand, within Echvi_4491 at 5369.043 kb on + strand, within Echvi_4491 at 5369.097 kb on + strand, within Echvi_4491 at 5369.097 kb on + strand, within Echvi_4491 at 5369.098 kb on - strand, within Echvi_4491 at 5369.098 kb on - strand, within Echvi_4491 at 5369.150 kb on - strand at 5369.182 kb on + strand at 5369.185 kb on - strand at 5369.252 kb on - strand at 5369.252 kb on - strand at 5369.253 kb on + strand at 5369.253 kb on + strand at 5369.261 kb on - strand at 5369.304 kb on + strand at 5369.309 kb on - strand at 5369.309 kb on - strand at 5369.309 kb on - strand at 5369.402 kb on + strand at 5369.470 kb on - strand at 5369.479 kb on + strand at 5369.480 kb on - strand at 5369.536 kb on - strand at 5369.536 kb on - strand at 5369.587 kb on + strand, within Echvi_4492 at 5369.587 kb on + strand, within Echvi_4492 at 5369.588 kb on - strand, within Echvi_4492 at 5369.609 kb on - strand, within Echvi_4492 at 5369.662 kb on + strand, within Echvi_4492 at 5369.662 kb on + strand, within Echvi_4492 at 5369.663 kb on - strand, within Echvi_4492 at 5369.663 kb on - strand, within Echvi_4492 at 5369.762 kb on + strand, within Echvi_4492 at 5369.763 kb on - strand, within Echvi_4492 at 5369.763 kb on - strand, within Echvi_4492 at 5369.787 kb on - strand, within Echvi_4492 at 5369.787 kb on - strand, within Echvi_4492 at 5369.797 kb on + strand, within Echvi_4492 at 5369.797 kb on + strand, within Echvi_4492 at 5369.797 kb on + strand, within Echvi_4492 at 5369.803 kb on + strand, within Echvi_4492 at 5369.803 kb on + strand, within Echvi_4492 at 5369.807 kb on + strand, within Echvi_4492 at 5369.807 kb on + strand, within Echvi_4492 at 5369.808 kb on - strand, within Echvi_4492 at 5369.839 kb on + strand, within Echvi_4492 at 5369.868 kb on - strand, within Echvi_4492 at 5369.868 kb on - strand, within Echvi_4492 at 5369.882 kb on + strand, within Echvi_4492 at 5369.882 kb on + strand, within Echvi_4492 at 5369.882 kb on + strand, within Echvi_4492 at 5369.882 kb on + strand, within Echvi_4492 at 5369.883 kb on - strand, within Echvi_4492 at 5369.898 kb on + strand, within Echvi_4492 at 5369.951 kb on - strand, within Echvi_4492 at 5369.951 kb on - strand, within Echvi_4492 at 5369.954 kb on + strand, within Echvi_4492 at 5369.955 kb on - strand, within Echvi_4492 at 5369.961 kb on + strand, within Echvi_4492 at 5369.968 kb on + strand, within Echvi_4492 at 5370.055 kb on - strand, within Echvi_4492 at 5370.080 kb on + strand, within Echvi_4492 at 5370.081 kb on - strand, within Echvi_4492 at 5370.081 kb on - strand, within Echvi_4492 at 5370.083 kb on - strand, within Echvi_4492 at 5370.184 kb on - strand, within Echvi_4492 at 5370.184 kb on - strand, within Echvi_4492 at 5370.187 kb on + strand, within Echvi_4492 at 5370.188 kb on - strand, within Echvi_4492 at 5370.190 kb on - strand, within Echvi_4492 at 5370.190 kb on - strand, within Echvi_4492 at 5370.190 kb on - strand, within Echvi_4492 at 5370.200 kb on + strand, within Echvi_4492 at 5370.202 kb on - strand, within Echvi_4492 at 5370.202 kb on - strand, within Echvi_4492 at 5370.206 kb on - strand, within Echvi_4492 at 5370.404 kb on - strand, within Echvi_4492 at 5370.404 kb on - strand, within Echvi_4492 at 5370.404 kb on - strand, within Echvi_4492 at 5370.404 kb on - strand, within Echvi_4492 at 5370.405 kb on + strand, within Echvi_4492 at 5370.406 kb on - strand, within Echvi_4492 at 5370.406 kb on - strand, within Echvi_4492 at 5370.432 kb on + strand, within Echvi_4492 at 5370.433 kb on - strand, within Echvi_4492 at 5370.434 kb on + strand, within Echvi_4492 at 5370.434 kb on + strand, within Echvi_4492 at 5370.436 kb on + strand, within Echvi_4492 at 5370.436 kb on + strand, within Echvi_4492 at 5370.456 kb on + strand, within Echvi_4492 at 5370.456 kb on + strand, within Echvi_4492 at 5370.458 kb on + strand, within Echvi_4492 at 5370.458 kb on + strand, within Echvi_4492 at 5370.458 kb on + strand, within Echvi_4492 at 5370.459 kb on - strand, within Echvi_4492 at 5370.459 kb on - strand, within Echvi_4492 at 5370.459 kb on - strand, within Echvi_4492 at 5370.480 kb on + strand, within Echvi_4492 at 5370.499 kb on - strand, within Echvi_4492 at 5370.523 kb on + strand, within Echvi_4492 at 5370.523 kb on + strand, within Echvi_4492 at 5370.524 kb on - strand, within Echvi_4492 at 5370.527 kb on + strand, within Echvi_4492 at 5370.528 kb on - strand, within Echvi_4492 at 5370.568 kb on + strand, within Echvi_4492 at 5370.591 kb on + strand, within Echvi_4492 at 5370.595 kb on + strand, within Echvi_4492 at 5370.595 kb on + strand, within Echvi_4492 at 5370.595 kb on + strand, within Echvi_4492 at 5370.596 kb on - strand, within Echvi_4492 at 5370.707 kb on - strand at 5370.711 kb on + strand at 5370.809 kb on + strand at 5370.810 kb on - strand at 5370.816 kb on + strand at 5370.821 kb on - strand at 5370.831 kb on + strand at 5370.864 kb on - strand at 5370.864 kb on - strand at 5370.979 kb on + strand at 5370.984 kb on + strand at 5371.022 kb on - strand at 5371.029 kb on - strand at 5371.029 kb on - strand at 5371.029 kb on - strand at 5371.029 kb on - strand at 5371.037 kb on - strand at 5371.075 kb on - strand at 5371.075 kb on - strand at 5371.121 kb on - strand at 5371.216 kb on + strand, within Echvi_4493 at 5371.216 kb on + strand, within Echvi_4493 at 5371.216 kb on + strand, within Echvi_4493 at 5371.217 kb on - strand, within Echvi_4493 at 5371.226 kb on + strand, within Echvi_4493 at 5371.226 kb on + strand, within Echvi_4493 at 5371.226 kb on + strand, within Echvi_4493 at 5371.226 kb on + strand, within Echvi_4493 at 5371.227 kb on - strand, within Echvi_4493 at 5371.227 kb on - strand, within Echvi_4493 at 5371.227 kb on - strand, within Echvi_4493 at 5371.227 kb on - strand, within Echvi_4493 at 5371.254 kb on - strand, within Echvi_4493 at 5371.254 kb on - strand, within Echvi_4493 at 5371.287 kb on - strand, within Echvi_4493 at 5371.287 kb on - strand, within Echvi_4493 at 5371.288 kb on + strand, within Echvi_4493 at 5371.288 kb on + strand, within Echvi_4493 at 5371.289 kb on - strand, within Echvi_4493 at 5371.295 kb on + strand, within Echvi_4493 at 5371.296 kb on - strand, within Echvi_4493 at 5371.298 kb on + strand, within Echvi_4493 at 5371.299 kb on - strand, within Echvi_4493 at 5371.339 kb on + strand, within Echvi_4493 at 5371.339 kb on + strand, within Echvi_4493 at 5371.392 kb on - strand, within Echvi_4493 at 5371.414 kb on - strand, within Echvi_4493 at 5371.528 kb on + strand, within Echvi_4493 at 5371.528 kb on + strand, within Echvi_4493 at 5371.528 kb on + strand, within Echvi_4493 at 5371.529 kb on - strand, within Echvi_4493 at 5371.579 kb on + strand, within Echvi_4493 at 5371.580 kb on - strand, within Echvi_4493 at 5371.580 kb on - strand, within Echvi_4493 at 5371.581 kb on + strand, within Echvi_4493 at 5371.582 kb on - strand, within Echvi_4493 at 5371.648 kb on + strand, within Echvi_4493 at 5371.708 kb on + strand, within Echvi_4493 at 5371.710 kb on + strand, within Echvi_4493 at 5371.711 kb on - strand, within Echvi_4493 at 5371.735 kb on + strand, within Echvi_4493 at 5371.735 kb on + strand, within Echvi_4493 at 5371.735 kb on + strand, within Echvi_4493 at 5371.736 kb on - strand, within Echvi_4493 at 5371.736 kb on - strand, within Echvi_4493 at 5371.736 kb on - strand, within Echvi_4493 at 5371.804 kb on - strand, within Echvi_4493
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.2 mg/ml remove 5,368,488 + +0.5 5,368,489 - +0.1 5,368,648 + -0.9 5,368,648 + +1.7 5,368,648 + +0.1 5,368,746 - -0.5 5,368,750 - +1.0 5,368,754 + -0.0 5,368,754 + -2.0 5,368,759 + -0.2 5,368,792 - -0.8 5,368,805 - -0.9 5,368,805 - +0.3 5,368,805 - -1.5 5,368,816 + -1.1 5,368,816 + -0.5 5,368,817 - +0.6 5,368,817 - +0.1 5,368,817 - -1.8 5,368,820 + +1.3 5,368,820 + -1.3 5,368,848 + -0.2 5,368,855 + -0.1 5,368,987 + Echvi_4491 0.50 -0.5 5,368,987 + Echvi_4491 0.50 -1.2 5,368,988 - Echvi_4491 0.51 -0.9 5,368,991 - Echvi_4491 0.52 +1.5 5,369,008 - Echvi_4491 0.57 -0.0 5,369,036 - Echvi_4491 0.66 +0.6 5,369,036 - Echvi_4491 0.66 -0.5 5,369,043 + Echvi_4491 0.68 +0.4 5,369,097 + Echvi_4491 0.85 -0.1 5,369,097 + Echvi_4491 0.85 -0.3 5,369,098 - Echvi_4491 0.86 -1.9 5,369,098 - Echvi_4491 0.86 -0.5 5,369,150 - -0.2 5,369,182 + +1.4 5,369,185 - +0.8 5,369,252 - -1.1 5,369,252 - +1.5 5,369,253 + -0.8 5,369,253 + +0.3 5,369,261 - -2.6 5,369,304 + -0.2 5,369,309 - -0.8 5,369,309 - +0.3 5,369,309 - -1.0 5,369,402 + +1.3 5,369,470 - +1.3 5,369,479 + +0.1 5,369,480 - +0.7 5,369,536 - -0.6 5,369,536 - +0.5 5,369,587 + Echvi_4492 0.11 +0.1 5,369,587 + Echvi_4492 0.11 +0.6 5,369,588 - Echvi_4492 0.11 -0.7 5,369,609 - Echvi_4492 0.13 +0.1 5,369,662 + Echvi_4492 0.17 -0.8 5,369,662 + Echvi_4492 0.17 +0.3 5,369,663 - Echvi_4492 0.17 +0.4 5,369,663 - Echvi_4492 0.17 +0.2 5,369,762 + Echvi_4492 0.24 -0.9 5,369,763 - Echvi_4492 0.24 +0.3 5,369,763 - Echvi_4492 0.24 -0.9 5,369,787 - Echvi_4492 0.26 -0.0 5,369,787 - Echvi_4492 0.26 -0.3 5,369,797 + Echvi_4492 0.27 -1.3 5,369,797 + Echvi_4492 0.27 -1.1 5,369,797 + Echvi_4492 0.27 +0.0 5,369,803 + Echvi_4492 0.27 +0.3 5,369,803 + Echvi_4492 0.27 -0.4 5,369,807 + Echvi_4492 0.27 -0.4 5,369,807 + Echvi_4492 0.27 -0.4 5,369,808 - Echvi_4492 0.27 -0.2 5,369,839 + Echvi_4492 0.30 +1.3 5,369,868 - Echvi_4492 0.32 -0.1 5,369,868 - Echvi_4492 0.32 -0.9 5,369,882 + Echvi_4492 0.33 +1.5 5,369,882 + Echvi_4492 0.33 -0.0 5,369,882 + Echvi_4492 0.33 +1.1 5,369,882 + Echvi_4492 0.33 +0.5 5,369,883 - Echvi_4492 0.33 -0.2 5,369,898 + Echvi_4492 0.34 -0.6 5,369,951 - Echvi_4492 0.38 -2.8 5,369,951 - Echvi_4492 0.38 -0.3 5,369,954 + Echvi_4492 0.38 -0.0 5,369,955 - Echvi_4492 0.38 -0.5 5,369,961 + Echvi_4492 0.38 +0.5 5,369,968 + Echvi_4492 0.39 +0.0 5,370,055 - Echvi_4492 0.45 -0.5 5,370,080 + Echvi_4492 0.47 +1.7 5,370,081 - Echvi_4492 0.47 -0.9 5,370,081 - Echvi_4492 0.47 +1.5 5,370,083 - Echvi_4492 0.47 -1.1 5,370,184 - Echvi_4492 0.55 -0.4 5,370,184 - Echvi_4492 0.55 -0.2 5,370,187 + Echvi_4492 0.55 +1.4 5,370,188 - Echvi_4492 0.55 -0.3 5,370,190 - Echvi_4492 0.55 -0.0 5,370,190 - Echvi_4492 0.55 +0.3 5,370,190 - Echvi_4492 0.55 -1.5 5,370,200 + Echvi_4492 0.56 +1.1 5,370,202 - Echvi_4492 0.56 -0.3 5,370,202 - Echvi_4492 0.56 +0.6 5,370,206 - Echvi_4492 0.56 -1.1 5,370,404 - Echvi_4492 0.70 -0.6 5,370,404 - Echvi_4492 0.70 +1.4 5,370,404 - Echvi_4492 0.70 -0.2 5,370,404 - Echvi_4492 0.70 -0.1 5,370,405 + Echvi_4492 0.71 +0.4 5,370,406 - Echvi_4492 0.71 +1.7 5,370,406 - Echvi_4492 0.71 +0.4 5,370,432 + Echvi_4492 0.73 +1.1 5,370,433 - Echvi_4492 0.73 +0.4 5,370,434 + Echvi_4492 0.73 +0.7 5,370,434 + Echvi_4492 0.73 +0.5 5,370,436 + Echvi_4492 0.73 -0.2 5,370,436 + Echvi_4492 0.73 -0.4 5,370,456 + Echvi_4492 0.74 +0.1 5,370,456 + Echvi_4492 0.74 +0.1 5,370,458 + Echvi_4492 0.74 +0.2 5,370,458 + Echvi_4492 0.74 +0.3 5,370,458 + Echvi_4492 0.74 +1.6 5,370,459 - Echvi_4492 0.74 +0.4 5,370,459 - Echvi_4492 0.74 +0.2 5,370,459 - Echvi_4492 0.74 +0.2 5,370,480 + Echvi_4492 0.76 +0.9 5,370,499 - Echvi_4492 0.77 +0.2 5,370,523 + Echvi_4492 0.79 +0.5 5,370,523 + Echvi_4492 0.79 -1.2 5,370,524 - Echvi_4492 0.79 +0.1 5,370,527 + Echvi_4492 0.79 +0.6 5,370,528 - Echvi_4492 0.79 +1.9 5,370,568 + Echvi_4492 0.82 +1.4 5,370,591 + Echvi_4492 0.84 +0.8 5,370,595 + Echvi_4492 0.84 -1.2 5,370,595 + Echvi_4492 0.84 +0.5 5,370,595 + Echvi_4492 0.84 +0.9 5,370,596 - Echvi_4492 0.84 -0.1 5,370,707 - +1.0 5,370,711 + -1.3 5,370,809 + +0.4 5,370,810 - +0.3 5,370,816 + +0.8 5,370,821 - -0.7 5,370,831 + +0.4 5,370,864 - -0.0 5,370,864 - +0.0 5,370,979 + +0.4 5,370,984 + -0.0 5,371,022 - +1.1 5,371,029 - -0.4 5,371,029 - -1.6 5,371,029 - -0.7 5,371,029 - -1.0 5,371,037 - -0.9 5,371,075 - -0.1 5,371,075 - +0.1 5,371,121 - -0.5 5,371,216 + Echvi_4493 0.12 +1.3 5,371,216 + Echvi_4493 0.12 -0.1 5,371,216 + Echvi_4493 0.12 -1.5 5,371,217 - Echvi_4493 0.12 -0.7 5,371,226 + Echvi_4493 0.14 +0.4 5,371,226 + Echvi_4493 0.14 +0.0 5,371,226 + Echvi_4493 0.14 +1.7 5,371,226 + Echvi_4493 0.14 +1.9 5,371,227 - Echvi_4493 0.14 +1.0 5,371,227 - Echvi_4493 0.14 -0.2 5,371,227 - Echvi_4493 0.14 -0.6 5,371,227 - Echvi_4493 0.14 -0.1 5,371,254 - Echvi_4493 0.17 -1.5 5,371,254 - Echvi_4493 0.17 -0.2 5,371,287 - Echvi_4493 0.21 -0.0 5,371,287 - Echvi_4493 0.21 -1.2 5,371,288 + Echvi_4493 0.21 -1.6 5,371,288 + Echvi_4493 0.21 +0.4 5,371,289 - Echvi_4493 0.21 +0.8 5,371,295 + Echvi_4493 0.22 -0.2 5,371,296 - Echvi_4493 0.22 +2.7 5,371,298 + Echvi_4493 0.22 -0.1 5,371,299 - Echvi_4493 0.22 -0.4 5,371,339 + Echvi_4493 0.27 +0.6 5,371,339 + Echvi_4493 0.27 -0.3 5,371,392 - Echvi_4493 0.33 +1.8 5,371,414 - Echvi_4493 0.36 -0.5 5,371,528 + Echvi_4493 0.49 -0.5 5,371,528 + Echvi_4493 0.49 +0.3 5,371,528 + Echvi_4493 0.49 -1.8 5,371,529 - Echvi_4493 0.49 -0.9 5,371,579 + Echvi_4493 0.55 +0.3 5,371,580 - Echvi_4493 0.55 +0.5 5,371,580 - Echvi_4493 0.55 -0.6 5,371,581 + Echvi_4493 0.55 +0.0 5,371,582 - Echvi_4493 0.55 +0.6 5,371,648 + Echvi_4493 0.63 -1.8 5,371,708 + Echvi_4493 0.70 -1.9 5,371,710 + Echvi_4493 0.71 +0.2 5,371,711 - Echvi_4493 0.71 -0.4 5,371,735 + Echvi_4493 0.73 -0.7 5,371,735 + Echvi_4493 0.73 -0.0 5,371,735 + Echvi_4493 0.73 -0.9 5,371,736 - Echvi_4493 0.74 -1.1 5,371,736 - Echvi_4493 0.74 -1.0 5,371,736 - Echvi_4493 0.74 -0.8 5,371,804 - Echvi_4493 0.82 -1.1
Or see this region's nucleotide sequence