Experiment: m.b. Carbenicillin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4394 and Echvi_4395 are separated by 7 nucleotides Echvi_4395 and Echvi_4396 are separated by 66 nucleotides
Echvi_4394: Echvi_4394 - Glycosyltransferase, at 5,252,967 to 5,254,091
_4394
Echvi_4395: Echvi_4395 - Membrane protein involved in the export of O-antigen and teichoic acid, at 5,254,099 to 5,255,352
_4395
Echvi_4396: Echvi_4396 - Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis, at 5,255,419 to 5,256,576
_4396
Position (kb) 5254
5255
5256 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 5254.087 kb on - strand at 5254.105 kb on - strand at 5255.363 kb on - strand at 5255.369 kb on - strand at 5255.369 kb on - strand at 5255.552 kb on - strand, within Echvi_4396 at 5255.612 kb on - strand, within Echvi_4396 at 5255.644 kb on - strand, within Echvi_4396 at 5255.644 kb on - strand, within Echvi_4396 at 5255.663 kb on - strand, within Echvi_4396 at 5255.683 kb on - strand, within Echvi_4396 at 5255.765 kb on - strand, within Echvi_4396 at 5255.765 kb on - strand, within Echvi_4396 at 5255.839 kb on - strand, within Echvi_4396 at 5255.841 kb on - strand, within Echvi_4396 at 5255.841 kb on - strand, within Echvi_4396 at 5255.860 kb on - strand, within Echvi_4396 at 5255.889 kb on + strand, within Echvi_4396 at 5255.893 kb on - strand, within Echvi_4396 at 5255.914 kb on + strand, within Echvi_4396 at 5255.941 kb on + strand, within Echvi_4396 at 5255.942 kb on - strand, within Echvi_4396 at 5255.948 kb on - strand, within Echvi_4396 at 5255.956 kb on - strand, within Echvi_4396 at 5255.961 kb on - strand, within Echvi_4396 at 5255.961 kb on - strand, within Echvi_4396 at 5255.961 kb on - strand, within Echvi_4396 at 5255.986 kb on - strand, within Echvi_4396 at 5256.021 kb on - strand, within Echvi_4396 at 5256.021 kb on - strand, within Echvi_4396 at 5256.027 kb on + strand, within Echvi_4396 at 5256.028 kb on - strand, within Echvi_4396 at 5256.028 kb on - strand, within Echvi_4396 at 5256.073 kb on - strand, within Echvi_4396 at 5256.073 kb on - strand, within Echvi_4396 at 5256.116 kb on - strand, within Echvi_4396 at 5256.131 kb on - strand, within Echvi_4396 at 5256.185 kb on - strand, within Echvi_4396 at 5256.185 kb on - strand, within Echvi_4396 at 5256.185 kb on - strand, within Echvi_4396 at 5256.188 kb on - strand, within Echvi_4396 at 5256.250 kb on + strand, within Echvi_4396 at 5256.253 kb on - strand, within Echvi_4396 at 5256.300 kb on - strand, within Echvi_4396 at 5256.303 kb on - strand, within Echvi_4396 at 5256.319 kb on + strand, within Echvi_4396 at 5256.319 kb on + strand, within Echvi_4396
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.2 mg/ml remove 5,254,087 - +2.9 5,254,105 - +0.2 5,255,363 - +0.2 5,255,369 - -0.9 5,255,369 - -1.2 5,255,552 - Echvi_4396 0.11 -3.4 5,255,612 - Echvi_4396 0.17 -1.2 5,255,644 - Echvi_4396 0.19 -0.8 5,255,644 - Echvi_4396 0.19 -1.8 5,255,663 - Echvi_4396 0.21 -3.5 5,255,683 - Echvi_4396 0.23 -2.2 5,255,765 - Echvi_4396 0.30 -2.6 5,255,765 - Echvi_4396 0.30 -1.9 5,255,839 - Echvi_4396 0.36 -2.7 5,255,841 - Echvi_4396 0.36 -2.7 5,255,841 - Echvi_4396 0.36 +0.6 5,255,860 - Echvi_4396 0.38 -2.5 5,255,889 + Echvi_4396 0.41 +4.6 5,255,893 - Echvi_4396 0.41 -2.5 5,255,914 + Echvi_4396 0.43 +1.6 5,255,941 + Echvi_4396 0.45 +2.5 5,255,942 - Echvi_4396 0.45 -1.2 5,255,948 - Echvi_4396 0.46 -1.8 5,255,956 - Echvi_4396 0.46 -3.1 5,255,961 - Echvi_4396 0.47 -1.6 5,255,961 - Echvi_4396 0.47 -1.5 5,255,961 - Echvi_4396 0.47 -0.0 5,255,986 - Echvi_4396 0.49 -1.0 5,256,021 - Echvi_4396 0.52 -0.6 5,256,021 - Echvi_4396 0.52 -3.1 5,256,027 + Echvi_4396 0.53 +4.4 5,256,028 - Echvi_4396 0.53 +0.6 5,256,028 - Echvi_4396 0.53 -2.8 5,256,073 - Echvi_4396 0.56 -0.0 5,256,073 - Echvi_4396 0.56 -2.4 5,256,116 - Echvi_4396 0.60 -2.0 5,256,131 - Echvi_4396 0.61 -1.5 5,256,185 - Echvi_4396 0.66 -4.7 5,256,185 - Echvi_4396 0.66 -1.8 5,256,185 - Echvi_4396 0.66 -3.0 5,256,188 - Echvi_4396 0.66 -0.6 5,256,250 + Echvi_4396 0.72 +3.1 5,256,253 - Echvi_4396 0.72 -1.7 5,256,300 - Echvi_4396 0.76 -2.0 5,256,303 - Echvi_4396 0.76 -2.8 5,256,319 + Echvi_4396 0.78 +2.3 5,256,319 + Echvi_4396 0.78 +4.7
Or see this region's nucleotide sequence