Experiment: m.b. Carbenicillin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4272 and Echvi_4273 are separated by 6 nucleotides Echvi_4273 and Echvi_4274 are separated by 9 nucleotides Echvi_4274 and Echvi_4275 are separated by 112 nucleotides Echvi_4275 and Echvi_4276 are separated by 24 nucleotides Echvi_4276 and Echvi_4277 overlap by 8 nucleotides Echvi_4277 and Echvi_4278 are separated by 21 nucleotides
Echvi_4272: Echvi_4272 - hypothetical protein, at 5,123,176 to 5,123,559
_4272
Echvi_4273: Echvi_4273 - Uncharacterized conserved protein, at 5,123,566 to 5,124,030
_4273
Echvi_4274: Echvi_4274 - Predicted transcriptional regulators, at 5,124,040 to 5,124,360
_4274
Echvi_4275: Echvi_4275 - hypothetical protein, at 5,124,473 to 5,124,901
_4275
Echvi_4276: Echvi_4276 - hypothetical protein, at 5,124,926 to 5,125,168
_4276
Echvi_4277: Echvi_4277 - Cupin domain., at 5,125,161 to 5,125,565
_4277
Echvi_4278: Echvi_4278 - hypothetical protein, at 5,125,587 to 5,125,964
_4278
Position (kb) 5124
5125 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5123.523 kb on + strand at 5123.523 kb on + strand at 5123.523 kb on + strand at 5123.524 kb on - strand at 5123.527 kb on + strand at 5123.528 kb on - strand at 5123.567 kb on + strand at 5123.686 kb on + strand, within Echvi_4273 at 5123.737 kb on + strand, within Echvi_4273 at 5123.737 kb on + strand, within Echvi_4273 at 5123.799 kb on + strand, within Echvi_4273 at 5123.799 kb on + strand, within Echvi_4273 at 5123.821 kb on - strand, within Echvi_4273 at 5123.827 kb on + strand, within Echvi_4273 at 5123.858 kb on + strand, within Echvi_4273 at 5123.859 kb on - strand, within Echvi_4273 at 5123.859 kb on - strand, within Echvi_4273 at 5123.898 kb on + strand, within Echvi_4273 at 5123.934 kb on - strand, within Echvi_4273 at 5123.934 kb on - strand, within Echvi_4273 at 5123.943 kb on - strand, within Echvi_4273 at 5123.944 kb on + strand, within Echvi_4273 at 5123.974 kb on + strand, within Echvi_4273 at 5123.975 kb on - strand, within Echvi_4273 at 5123.976 kb on + strand, within Echvi_4273 at 5123.976 kb on + strand, within Echvi_4273 at 5123.976 kb on + strand, within Echvi_4273 at 5123.977 kb on - strand, within Echvi_4273 at 5124.030 kb on + strand at 5124.030 kb on + strand at 5124.030 kb on + strand at 5124.031 kb on - strand at 5124.041 kb on + strand at 5124.065 kb on - strand at 5124.127 kb on + strand, within Echvi_4274 at 5124.161 kb on + strand, within Echvi_4274 at 5124.300 kb on + strand, within Echvi_4274 at 5124.304 kb on + strand, within Echvi_4274 at 5124.420 kb on + strand at 5124.420 kb on + strand at 5124.425 kb on + strand at 5124.425 kb on + strand at 5124.425 kb on + strand at 5124.425 kb on + strand at 5124.426 kb on - strand at 5124.426 kb on - strand at 5124.449 kb on + strand at 5124.556 kb on + strand, within Echvi_4275 at 5124.641 kb on + strand, within Echvi_4275 at 5124.648 kb on + strand, within Echvi_4275 at 5124.649 kb on - strand, within Echvi_4275 at 5124.661 kb on + strand, within Echvi_4275 at 5124.675 kb on + strand at 5124.797 kb on + strand, within Echvi_4275 at 5124.822 kb on + strand, within Echvi_4275 at 5124.900 kb on - strand at 5124.924 kb on + strand at 5124.925 kb on - strand at 5124.925 kb on - strand at 5124.925 kb on - strand at 5124.927 kb on + strand at 5124.932 kb on + strand at 5124.948 kb on - strand at 5124.961 kb on + strand, within Echvi_4276 at 5124.970 kb on + strand, within Echvi_4276 at 5124.983 kb on + strand, within Echvi_4276 at 5124.983 kb on + strand, within Echvi_4276 at 5124.991 kb on + strand, within Echvi_4276 at 5124.991 kb on + strand, within Echvi_4276 at 5124.991 kb on + strand, within Echvi_4276 at 5124.992 kb on - strand, within Echvi_4276 at 5124.992 kb on - strand, within Echvi_4276 at 5125.021 kb on + strand, within Echvi_4276 at 5125.049 kb on - strand, within Echvi_4276 at 5125.194 kb on + strand at 5125.195 kb on - strand at 5125.348 kb on - strand, within Echvi_4277 at 5125.348 kb on - strand, within Echvi_4277 at 5125.350 kb on - strand, within Echvi_4277 at 5125.355 kb on + strand, within Echvi_4277 at 5125.356 kb on - strand, within Echvi_4277 at 5125.356 kb on - strand, within Echvi_4277 at 5125.356 kb on - strand, within Echvi_4277 at 5125.356 kb on - strand, within Echvi_4277 at 5125.356 kb on - strand, within Echvi_4277 at 5125.356 kb on - strand, within Echvi_4277 at 5125.358 kb on + strand, within Echvi_4277 at 5125.358 kb on + strand, within Echvi_4277 at 5125.358 kb on + strand, within Echvi_4277 at 5125.359 kb on - strand, within Echvi_4277 at 5125.367 kb on + strand, within Echvi_4277 at 5125.368 kb on - strand, within Echvi_4277 at 5125.372 kb on + strand, within Echvi_4277 at 5125.377 kb on + strand, within Echvi_4277 at 5125.452 kb on - strand, within Echvi_4277 at 5125.453 kb on + strand, within Echvi_4277 at 5125.454 kb on - strand, within Echvi_4277 at 5125.457 kb on + strand, within Echvi_4277 at 5125.457 kb on + strand, within Echvi_4277 at 5125.458 kb on - strand, within Echvi_4277 at 5125.458 kb on - strand, within Echvi_4277 at 5125.458 kb on - strand, within Echvi_4277 at 5125.458 kb on - strand, within Echvi_4277 at 5125.458 kb on - strand, within Echvi_4277 at 5125.460 kb on + strand, within Echvi_4277 at 5125.502 kb on + strand, within Echvi_4277 at 5125.513 kb on + strand, within Echvi_4277 at 5125.521 kb on - strand, within Echvi_4277 at 5125.521 kb on - strand, within Echvi_4277 at 5125.521 kb on - strand, within Echvi_4277 at 5125.537 kb on - strand at 5125.569 kb on - strand at 5125.588 kb on + strand at 5125.588 kb on + strand at 5125.588 kb on + strand at 5125.588 kb on + strand at 5125.590 kb on + strand at 5125.590 kb on + strand at 5125.590 kb on + strand at 5125.590 kb on + strand at 5125.590 kb on + strand at 5125.590 kb on + strand at 5125.590 kb on + strand at 5125.590 kb on + strand at 5125.591 kb on - strand at 5125.591 kb on - strand at 5125.591 kb on - strand at 5125.596 kb on + strand at 5125.596 kb on + strand at 5125.597 kb on - strand at 5125.597 kb on - strand at 5125.597 kb on - strand at 5125.603 kb on + strand at 5125.603 kb on + strand at 5125.604 kb on - strand at 5125.669 kb on + strand, within Echvi_4278 at 5125.695 kb on + strand, within Echvi_4278 at 5125.763 kb on + strand, within Echvi_4278 at 5125.780 kb on - strand, within Echvi_4278
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.2 mg/ml remove 5,123,523 + +0.3 5,123,523 + -0.1 5,123,523 + -0.4 5,123,524 - +0.2 5,123,527 + +0.5 5,123,528 - +0.7 5,123,567 + -1.5 5,123,686 + Echvi_4273 0.26 +0.7 5,123,737 + Echvi_4273 0.37 -0.7 5,123,737 + Echvi_4273 0.37 -0.2 5,123,799 + Echvi_4273 0.50 -2.3 5,123,799 + Echvi_4273 0.50 +1.4 5,123,821 - Echvi_4273 0.55 -0.5 5,123,827 + Echvi_4273 0.56 -0.6 5,123,858 + Echvi_4273 0.63 -0.7 5,123,859 - Echvi_4273 0.63 -0.1 5,123,859 - Echvi_4273 0.63 -0.4 5,123,898 + Echvi_4273 0.71 -2.4 5,123,934 - Echvi_4273 0.79 +0.7 5,123,934 - Echvi_4273 0.79 -0.1 5,123,943 - Echvi_4273 0.81 -0.1 5,123,944 + Echvi_4273 0.81 -1.0 5,123,974 + Echvi_4273 0.88 +0.2 5,123,975 - Echvi_4273 0.88 -1.5 5,123,976 + Echvi_4273 0.88 -1.7 5,123,976 + Echvi_4273 0.88 -0.4 5,123,976 + Echvi_4273 0.88 +0.2 5,123,977 - Echvi_4273 0.88 -0.9 5,124,030 + +1.1 5,124,030 + -1.3 5,124,030 + -0.0 5,124,031 - +0.7 5,124,041 + -0.1 5,124,065 - +0.3 5,124,127 + Echvi_4274 0.27 -0.5 5,124,161 + Echvi_4274 0.38 -2.0 5,124,300 + Echvi_4274 0.81 -0.6 5,124,304 + Echvi_4274 0.82 -1.7 5,124,420 + +0.1 5,124,420 + -0.6 5,124,425 + -0.4 5,124,425 + -0.7 5,124,425 + -0.2 5,124,425 + -0.2 5,124,426 - +1.3 5,124,426 - +0.1 5,124,449 + -0.4 5,124,556 + Echvi_4275 0.19 +0.9 5,124,641 + Echvi_4275 0.39 -1.3 5,124,648 + Echvi_4275 0.41 -0.6 5,124,649 - Echvi_4275 0.41 -0.7 5,124,661 + Echvi_4275 0.44 -0.6 5,124,675 + +3.1 5,124,797 + Echvi_4275 0.76 -0.2 5,124,822 + Echvi_4275 0.81 -0.8 5,124,900 - -0.3 5,124,924 + -0.6 5,124,925 - +0.1 5,124,925 - -0.2 5,124,925 - +1.5 5,124,927 + +0.7 5,124,932 + +0.4 5,124,948 - +0.9 5,124,961 + Echvi_4276 0.14 +0.2 5,124,970 + Echvi_4276 0.18 +0.1 5,124,983 + Echvi_4276 0.23 -1.0 5,124,983 + Echvi_4276 0.23 -0.0 5,124,991 + Echvi_4276 0.27 -0.6 5,124,991 + Echvi_4276 0.27 -0.3 5,124,991 + Echvi_4276 0.27 -0.9 5,124,992 - Echvi_4276 0.27 +0.2 5,124,992 - Echvi_4276 0.27 -1.4 5,125,021 + Echvi_4276 0.39 +0.5 5,125,049 - Echvi_4276 0.51 +0.6 5,125,194 + +0.1 5,125,195 - -0.3 5,125,348 - Echvi_4277 0.46 -1.6 5,125,348 - Echvi_4277 0.46 -1.5 5,125,350 - Echvi_4277 0.47 +0.1 5,125,355 + Echvi_4277 0.48 +0.7 5,125,356 - Echvi_4277 0.48 -1.6 5,125,356 - Echvi_4277 0.48 -0.4 5,125,356 - Echvi_4277 0.48 -1.7 5,125,356 - Echvi_4277 0.48 -0.0 5,125,356 - Echvi_4277 0.48 +1.5 5,125,356 - Echvi_4277 0.48 -0.3 5,125,358 + Echvi_4277 0.49 -0.2 5,125,358 + Echvi_4277 0.49 -0.5 5,125,358 + Echvi_4277 0.49 -1.4 5,125,359 - Echvi_4277 0.49 -0.3 5,125,367 + Echvi_4277 0.51 -0.7 5,125,368 - Echvi_4277 0.51 -0.9 5,125,372 + Echvi_4277 0.52 +0.1 5,125,377 + Echvi_4277 0.53 -1.0 5,125,452 - Echvi_4277 0.72 +1.5 5,125,453 + Echvi_4277 0.72 -0.9 5,125,454 - Echvi_4277 0.72 -0.7 5,125,457 + Echvi_4277 0.73 -0.1 5,125,457 + Echvi_4277 0.73 -0.3 5,125,458 - Echvi_4277 0.73 +0.2 5,125,458 - Echvi_4277 0.73 +1.1 5,125,458 - Echvi_4277 0.73 +0.0 5,125,458 - Echvi_4277 0.73 -1.3 5,125,458 - Echvi_4277 0.73 -1.2 5,125,460 + Echvi_4277 0.74 -0.4 5,125,502 + Echvi_4277 0.84 +0.4 5,125,513 + Echvi_4277 0.87 +0.8 5,125,521 - Echvi_4277 0.89 -1.0 5,125,521 - Echvi_4277 0.89 +2.1 5,125,521 - Echvi_4277 0.89 +0.5 5,125,537 - -0.6 5,125,569 - -0.5 5,125,588 + +0.3 5,125,588 + +0.4 5,125,588 + -0.7 5,125,588 + -1.5 5,125,590 + -0.7 5,125,590 + -0.7 5,125,590 + +0.6 5,125,590 + +1.5 5,125,590 + +0.7 5,125,590 + -0.9 5,125,590 + -0.2 5,125,590 + +0.1 5,125,591 - -1.5 5,125,591 - -0.6 5,125,591 - -2.3 5,125,596 + -0.7 5,125,596 + -1.2 5,125,597 - -0.5 5,125,597 - -0.7 5,125,597 - -0.6 5,125,603 + +0.2 5,125,603 + +0.7 5,125,604 - +0.1 5,125,669 + Echvi_4278 0.22 -0.1 5,125,695 + Echvi_4278 0.29 +1.4 5,125,763 + Echvi_4278 0.47 +0.5 5,125,780 - Echvi_4278 0.51 +0.7
Or see this region's nucleotide sequence