Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4223

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
5,060,540	+		Echvi_4222	0.50	+2.5
5,060,540	+		Echvi_4222	0.50	-1.2
5,060,540	+		Echvi_4222	0.50	-0.3
5,060,541	-		Echvi_4222	0.50	+0.8
5,060,543	-		Echvi_4222	0.50	+0.0
5,060,629	+		Echvi_4222	0.56	-1.1
5,060,630	-		Echvi_4222	0.56	+1.4
5,060,655	-		Echvi_4222	0.58	+1.0
5,060,723	-		Echvi_4222	0.62	+0.3
5,060,828	+		Echvi_4222	0.70	-0.0
5,060,948	+		Echvi_4222	0.78	-0.1
5,060,970	+		Echvi_4222	0.79	+0.3
5,060,975	+		Echvi_4222	0.80	+0.0
5,061,054	+		Echvi_4222	0.85	+0.1
5,061,055	-		Echvi_4222	0.85	+0.1
5,061,055	-		Echvi_4222	0.85	+0.6
5,061,241	-				+0.6
5,061,249	+				-0.0
5,061,249	+				-0.2
5,061,251	+				+0.4
5,061,269	+				-0.9
5,061,366	+				-1.9
5,061,561	+				+1.3
5,061,567	+				+1.6
5,061,567	+				-1.4
5,061,567	+				+0.6
5,061,568	-				+0.3
5,061,803	+		Echvi_4223	0.20	-0.0
5,061,860	+		Echvi_4223	0.24	+4.5
5,061,860	+		Echvi_4223	0.24	+2.1
5,061,899	-		Echvi_4223	0.27	+0.1
5,061,975	+		Echvi_4223	0.32	-0.4
5,061,975	+		Echvi_4223	0.32	+0.3
5,061,975	+		Echvi_4223	0.32	-0.8
5,061,976	-		Echvi_4223	0.32	-0.1
5,062,158	+		Echvi_4223	0.45	-2.4
5,062,159	-		Echvi_4223	0.45	+0.3
5,062,159	-		Echvi_4223	0.45	-0.7
5,062,159	-		Echvi_4223	0.45	-0.1
5,062,215	+		Echvi_4223	0.49	+0.7
5,062,215	+		Echvi_4223	0.49	+0.8
5,062,304	+		Echvi_4223	0.55	-0.1
5,062,439	+		Echvi_4223	0.65	+1.7
5,062,439	+		Echvi_4223	0.65	-0.7
5,062,439	+		Echvi_4223	0.65	+0.8
5,062,440	-		Echvi_4223	0.65	+1.2
5,062,573	+		Echvi_4223	0.74	-1.3
5,062,574	-		Echvi_4223	0.74	+0.9
5,062,576	-		Echvi_4223	0.74	+0.2
5,062,614	+		Echvi_4223	0.77	+1.1
5,062,673	-		Echvi_4223	0.81	+1.6
5,062,678	-		Echvi_4223	0.82	+0.5
5,062,681	-		Echvi_4223	0.82	+0.3
5,062,682	+		Echvi_4223	0.82	+0.2
5,062,682	+		Echvi_4223	0.82	+1.2
5,062,682	+		Echvi_4223	0.82	-0.8
5,062,683	-		Echvi_4223	0.82	-1.0
5,062,683	-		Echvi_4223	0.82	+0.8
5,062,683	-		Echvi_4223	0.82	+0.1
5,062,817	+				+0.8
5,062,818	-				+0.0
5,062,818	-				+0.0
5,062,828	+				-1.0
5,062,829	-				-1.3
5,062,830	+				-0.4
5,062,830	+				-0.4
5,062,830	+				-1.3
5,062,830	+				-0.5
5,062,830	+				-0.4
5,062,831	-				+0.1
5,062,842	+				-0.4
5,062,842	+				-0.3
5,062,925	+				+0.4
5,062,950	-				+0.8
5,063,010	+				+0.1
5,063,011	-				-0.7
5,063,012	+				+0.3
5,063,013	-				+0.8
5,063,016	-				+0.4
5,063,054	+				-0.0
5,063,055	-				-0.2
5,063,060	-				-1.4
5,063,080	+				-0.3
5,063,163	-		Echvi_4224	0.16	+0.4
5,063,165	+		Echvi_4224	0.16	-0.3
5,063,276	-		Echvi_4224	0.24	-1.4
5,063,276	-		Echvi_4224	0.24	-0.1
5,063,309	-		Echvi_4224	0.26	-0.4
5,063,309	-		Echvi_4224	0.26	+1.1
5,063,327	+		Echvi_4224	0.28	-2.3
5,063,327	+		Echvi_4224	0.28	-0.1
5,063,327	+		Echvi_4224	0.28	+2.9
5,063,328	-		Echvi_4224	0.28	-0.2
5,063,328	-		Echvi_4224	0.28	-0.9
5,063,328	-		Echvi_4224	0.28	+2.6
5,063,328	-		Echvi_4224	0.28	+1.1
5,063,427	+		Echvi_4224	0.35	+1.9
5,063,427	+		Echvi_4224	0.35	-0.7
5,063,427	+		Echvi_4224	0.35	+0.2
5,063,430	-		Echvi_4224	0.35	-1.0
5,063,452	-		Echvi_4224	0.37	+2.1
5,063,456	+		Echvi_4224	0.37	-0.4
5,063,457	-		Echvi_4224	0.37	+1.3
5,063,457	-		Echvi_4224	0.37	-1.1
5,063,477	+		Echvi_4224	0.38	-0.6
5,063,478	-		Echvi_4224	0.38	+1.3
5,063,724	+		Echvi_4224	0.56	+1.9
5,063,725	-		Echvi_4224	0.56	-2.1
5,063,725	-		Echvi_4224	0.56	+0.1
5,063,785	-		Echvi_4224	0.61	+0.2
5,063,847	+		Echvi_4224	0.65	+1.1
5,063,847	+		Echvi_4224	0.65	+0.9
5,063,847	+		Echvi_4224	0.65	-0.4
5,063,848	-		Echvi_4224	0.65	+1.1
5,063,848	-		Echvi_4224	0.65	+0.1
5,063,930	+		Echvi_4224	0.71	-2.7
5,063,931	-		Echvi_4224	0.71	-1.2
5,063,931	-		Echvi_4224	0.71	+0.8
5,063,931	-		Echvi_4224	0.71	-0.3