Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4018

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
4,811,788	+		Echvi_4017	0.31	-2.3
4,811,880	+		Echvi_4017	0.40	+0.3
4,811,881	-		Echvi_4017	0.40	+0.5
4,812,026	+		Echvi_4017	0.54	+0.2
4,812,027	-		Echvi_4017	0.54	+2.1
4,812,203	+		Echvi_4017	0.71	-0.1
4,812,315	-		Echvi_4017	0.82	+0.9
4,812,323	+		Echvi_4017	0.82	-0.4
4,812,323	+		Echvi_4017	0.82	-1.1
4,812,323	+		Echvi_4017	0.82	-1.5
4,812,324	-		Echvi_4017	0.82	+0.1
4,812,368	-		Echvi_4017	0.87	+0.2
4,812,368	-		Echvi_4017	0.87	+2.1
4,812,386	-		Echvi_4017	0.88	+0.3
4,812,388	+		Echvi_4017	0.89	-0.5
4,812,388	+		Echvi_4017	0.89	-2.8
4,812,389	-		Echvi_4017	0.89	-0.7
4,812,422	-				-0.3
4,812,423	+				-1.3
4,812,423	+				+1.8
4,812,423	+				+1.9
4,812,423	+				+0.3
4,812,424	-				+1.0
4,812,424	-				-1.7
4,812,424	-				-0.7
4,812,424	-				-0.5
4,812,424	-				+0.3
4,812,427	+				-1.3
4,812,428	-				+1.1
4,812,433	-				+0.7
4,812,553	+				-0.3
4,812,554	-				-1.0
4,812,622	-				-0.5
4,812,640	+				+1.8
4,812,640	+				+0.1
4,812,641	-				+0.6
4,812,656	-				-0.5
4,812,806	+		Echvi_4018	0.53	-0.2
4,812,807	-		Echvi_4018	0.53	-0.5
4,812,818	+		Echvi_4018	0.57	-1.3
4,812,818	+		Echvi_4018	0.57	-0.5
4,812,818	+		Echvi_4018	0.57	+0.1
4,812,818	+		Echvi_4018	0.57	-2.0
4,812,819	-		Echvi_4018	0.57	-1.2
4,812,819	-		Echvi_4018	0.57	-1.2
4,812,857	+		Echvi_4018	0.71	-2.1
4,812,868	+		Echvi_4018	0.74	-0.4
4,812,868	+		Echvi_4018	0.74	-0.9
4,812,895	+		Echvi_4018	0.84	-0.2
4,812,896	-		Echvi_4018	0.84	+0.2
4,812,896	-		Echvi_4018	0.84	-0.3
4,812,896	-		Echvi_4018	0.84	-1.1
4,812,900	+		Echvi_4018	0.86	-0.9
4,812,900	+		Echvi_4018	0.86	-0.4
4,812,900	+		Echvi_4018	0.86	-0.8
4,812,901	-		Echvi_4018	0.86	+0.5
4,812,901	-		Echvi_4018	0.86	-1.0
4,812,947	+				+0.1
4,812,969	-				+0.6
4,812,976	+				-0.4
4,812,976	+				-0.6
4,812,976	+				-0.1
4,812,977	-				-0.1
4,812,983	-				-0.5
4,812,983	-				+0.1
4,812,983	-				+0.0
4,812,986	+				-1.1
4,812,986	+				-0.7
4,812,987	-				-1.5
4,812,987	-				+0.0
4,812,987	-				-0.5
4,812,987	-				-0.5
4,813,031	-				-0.9
4,813,064	+				-1.1
4,813,065	-				+0.8
4,813,065	-				-0.5
4,813,092	-				+1.1
4,813,097	+				-0.1
4,813,097	+				+0.5
4,813,098	-				-0.1
4,813,098	-				+0.1
4,813,120	-				+0.7
4,813,139	+				+0.1
4,813,140	-				+0.4
4,813,151	+				+0.7
4,813,155	+				-0.2
4,813,155	+				-0.0
4,813,220	+				-0.4
4,813,299	-				+0.9
4,813,299	-				+0.2
4,813,299	-				-0.3
4,813,311	+				-0.5
4,813,319	+				+0.3
4,813,320	-				-1.7
4,813,321	+				-0.3
4,813,322	-				+1.2
4,813,322	-				+0.9
4,813,322	-				+0.4
4,813,322	-				-0.9
4,813,425	+		Echvi_4019	0.12	+0.0
4,813,425	+		Echvi_4019	0.12	-1.6
4,813,426	-		Echvi_4019	0.12	-0.2
4,813,433	+		Echvi_4019	0.12	-0.6
4,813,434	-		Echvi_4019	0.12	+0.3
4,813,434	-		Echvi_4019	0.12	+1.1
4,813,435	+		Echvi_4019	0.12	+0.6
4,813,469	+		Echvi_4019	0.15	+0.4
4,813,487	+		Echvi_4019	0.16	-0.7
4,813,487	+		Echvi_4019	0.16	-0.1
4,813,487	+		Echvi_4019	0.16	+0.1
4,813,487	+		Echvi_4019	0.16	-2.3
4,813,488	-		Echvi_4019	0.16	-0.2
4,813,521	-		Echvi_4019	0.19	+0.7
4,813,553	+		Echvi_4019	0.21	+0.3
4,813,553	+		Echvi_4019	0.21	-0.5
4,813,553	+		Echvi_4019	0.21	+0.5
4,813,553	+		Echvi_4019	0.21	-0.9
4,813,553	+		Echvi_4019	0.21	-2.1
4,813,554	-		Echvi_4019	0.21	+0.2
4,813,554	-		Echvi_4019	0.21	-2.3
4,813,554	-		Echvi_4019	0.21	+0.5
4,813,554	-		Echvi_4019	0.21	-0.1
4,813,633	+		Echvi_4019	0.27	-0.2
4,813,634	-		Echvi_4019	0.27	+0.0
4,813,638	+		Echvi_4019	0.27	+0.7
4,813,639	-		Echvi_4019	0.27	+0.6
4,813,655	+		Echvi_4019	0.29	-1.6
4,813,655	+		Echvi_4019	0.29	+0.3
4,813,721	-		Echvi_4019	0.34	-0.1
4,813,770	+		Echvi_4019	0.37	-1.7
4,813,771	-		Echvi_4019	0.37	-0.0
4,813,775	+		Echvi_4019	0.38	+0.8
4,813,775	+		Echvi_4019	0.38	-1.3
4,813,819	+		Echvi_4019	0.41	-0.2
4,813,819	+		Echvi_4019	0.41	+0.3
4,813,819	+		Echvi_4019	0.41	-0.1
4,813,852	+		Echvi_4019	0.43	+1.2
4,813,852	+		Echvi_4019	0.43	+1.3
4,813,853	-		Echvi_4019	0.43	-0.4
4,813,853	-		Echvi_4019	0.43	+0.6
4,813,853	-		Echvi_4019	0.43	+0.8
4,813,853	-		Echvi_4019	0.43	+0.2
4,813,853	-		Echvi_4019	0.43	+1.4
4,813,856	+		Echvi_4019	0.44	+0.0
4,813,856	+		Echvi_4019	0.44	-0.3
4,813,857	-		Echvi_4019	0.44	+0.3
4,813,857	-		Echvi_4019	0.44	-0.1
4,813,857	-		Echvi_4019	0.44	-0.3
4,813,857	-		Echvi_4019	0.44	-0.1
4,813,857	-		Echvi_4019	0.44	-1.6
4,813,857	-		Echvi_4019	0.44	+0.0
4,813,857	-		Echvi_4019	0.44	+1.5
4,813,857	-		Echvi_4019	0.44	+0.1
4,813,904	+		Echvi_4019	0.47	-0.0
4,813,905	-		Echvi_4019	0.47	-0.5
4,813,905	-		Echvi_4019	0.47	+0.5