Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3944

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
4,723,627	+		Echvi_3943	0.63	-0.2
4,723,627	+		Echvi_3943	0.63	+0.3
4,723,627	+		Echvi_3943	0.63	+1.0
4,723,628	-		Echvi_3943	0.63	+1.6
4,723,628	-		Echvi_3943	0.63	+0.9
4,723,726	+		Echvi_3943	0.69	+0.4
4,723,726	+		Echvi_3943	0.69	-0.2
4,723,726	+		Echvi_3943	0.69	+0.8
4,723,738	-		Echvi_3943	0.69	-1.6
4,723,916	+		Echvi_3943	0.80	+0.6
4,723,917	-		Echvi_3943	0.80	+1.0
4,723,943	-		Echvi_3943	0.81	+0.2
4,723,979	-		Echvi_3943	0.83	-0.7
4,724,029	+		Echvi_3943	0.86	+0.5
4,724,029	+		Echvi_3943	0.86	+0.7
4,724,030	-		Echvi_3943	0.86	-0.0
4,724,150	-				+0.4
4,724,150	-				-0.6
4,724,150	-				-1.2
4,724,182	-				+1.1
4,724,264	-				-0.5
4,724,294	-				-0.1
4,724,309	+				-0.2
4,724,376	+				+0.6
4,724,382	+				+0.4
4,724,400	-				-1.0
4,724,455	+				+0.9
4,724,455	+				-0.3
4,724,506	-				-0.9
4,724,526	-				+1.1
4,724,548	+				+0.6
4,724,548	+				-1.1
4,724,571	+				-0.1
4,724,582	-				+0.1
4,724,587	+				-1.8
4,724,603	+				+0.2
4,724,648	+		Echvi_3944	0.10	+0.1
4,724,648	+		Echvi_3944	0.10	-0.3
4,724,649	-		Echvi_3944	0.10	-1.1
4,724,649	-		Echvi_3944	0.10	+0.4
4,724,661	-		Echvi_3944	0.12	-1.2
4,724,669	+		Echvi_3944	0.13	+0.3
4,724,680	+		Echvi_3944	0.15	-0.8
4,724,680	+		Echvi_3944	0.15	-0.9
4,724,680	+		Echvi_3944	0.15	-0.5
4,724,680	+		Echvi_3944	0.15	-0.4
4,724,680	+		Echvi_3944	0.15	+0.8
4,724,681	-		Echvi_3944	0.15	+0.6
4,724,689	-		Echvi_3944	0.16	-1.0
4,724,728	+		Echvi_3944	0.21	-1.1
4,724,785	+		Echvi_3944	0.29	-0.8
4,724,843	+		Echvi_3944	0.37	-1.4
4,724,872	+		Echvi_3944	0.41	+0.3
4,724,873	-		Echvi_3944	0.41	-0.6
4,724,873	-		Echvi_3944	0.41	+0.4
4,724,911	-		Echvi_3944	0.46	+0.4
4,724,989	+		Echvi_3944	0.57	+0.1
4,724,990	-		Echvi_3944	0.57	-0.4
4,724,990	-		Echvi_3944	0.57	+0.9
4,724,991	+		Echvi_3944	0.57	-0.3
4,725,001	+		Echvi_3944	0.58	-0.6
4,725,001	+		Echvi_3944	0.58	-0.1
4,725,002	-		Echvi_3944	0.59	-0.8
4,725,002	-		Echvi_3944	0.59	-1.1
4,725,008	+		Echvi_3944	0.59	-0.2
4,725,009	-		Echvi_3944	0.59	-0.2
4,725,046	+		Echvi_3944	0.64	-0.1
4,725,207	+		Echvi_3944	0.86	-0.7
4,725,208	-		Echvi_3944	0.87	-0.8
4,725,208	-		Echvi_3944	0.87	+0.0
4,725,280	+				-0.4
4,725,309	+				+0.5
4,725,351	+				-0.5
4,725,351	+				+0.1
4,725,373	+				-0.8
4,725,411	-				-3.2
4,725,411	-				+2.1
4,725,514	-				+1.1
4,725,514	-				+0.8
4,725,609	+		Echvi_3945	0.11	-0.3
4,725,691	-		Echvi_3945	0.14	+1.8
4,725,721	+		Echvi_3945	0.15	+1.1
4,725,723	+		Echvi_3945	0.15	-1.8
4,725,840	-		Echvi_3945	0.19	-0.8
4,725,859	+		Echvi_3945	0.20	+0.6
4,725,910	-		Echvi_3945	0.22	+2.5
4,725,975	-		Echvi_3945	0.24	+0.7
4,726,101	-		Echvi_3945	0.29	+0.6
4,726,101	-		Echvi_3945	0.29	-1.0