Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3900

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
4,663,474	+				+0.1
4,663,475	-				+1.1
4,663,475	-				+1.0
4,663,476	+				+0.4
4,663,476	+				+0.0
4,663,488	-				+1.6
4,663,647	+				-0.5
4,663,671	-				+0.5
4,663,741	-				+0.3
4,663,808	+				+0.2
4,663,808	+				+0.1
4,663,809	-				+0.2
4,663,818	+				+0.4
4,663,818	+				+1.1
4,663,830	-				+0.5
4,664,139	+				+0.5
4,664,161	-				+0.0
4,664,162	+				+1.5
4,664,219	-				+0.3
4,664,287	+				+0.6
4,664,320	-				+0.3
4,664,472	+		Echvi_3900	0.10	-3.7
4,664,505	+		Echvi_3900	0.14	+0.8
4,664,505	+		Echvi_3900	0.14	-0.5
4,664,546	-		Echvi_3900	0.18	-0.5
4,664,547	+		Echvi_3900	0.18	+1.0
4,664,547	+		Echvi_3900	0.18	+0.3
4,664,547	+		Echvi_3900	0.18	-0.1
4,664,548	-		Echvi_3900	0.19	+0.1
4,664,548	-		Echvi_3900	0.19	-0.2
4,664,552	+		Echvi_3900	0.19	+0.8
4,664,584	+		Echvi_3900	0.23	+0.6
4,664,623	+		Echvi_3900	0.27	+1.5
4,664,624	-		Echvi_3900	0.27	-1.0
4,664,639	+		Echvi_3900	0.29	-0.9
4,664,679	+		Echvi_3900	0.33	-1.1
4,664,710	-		Echvi_3900	0.37	-0.9
4,664,718	+		Echvi_3900	0.38	+0.7
4,664,719	-		Echvi_3900	0.38	-0.9
4,664,719	-		Echvi_3900	0.38	-1.3
4,664,719	-		Echvi_3900	0.38	-0.7
4,664,764	-		Echvi_3900	0.43	+0.5
4,664,764	-		Echvi_3900	0.43	+0.1
4,664,789	-		Echvi_3900	0.46	-0.5
4,664,830	+		Echvi_3900	0.50	-1.3
4,664,831	-		Echvi_3900	0.50	-0.2
4,664,842	+		Echvi_3900	0.52	-0.7
4,664,843	-		Echvi_3900	0.52	+0.5
4,664,868	-		Echvi_3900	0.54	-0.7
4,664,868	-		Echvi_3900	0.54	+0.1
4,664,875	-		Echvi_3900	0.55	-0.4
4,664,924	-		Echvi_3900	0.61	-1.8
4,664,965	-		Echvi_3900	0.65	-1.5
4,664,965	-		Echvi_3900	0.65	-0.4
4,664,984	-		Echvi_3900	0.67	-0.8
4,665,072	+		Echvi_3900	0.77	+0.4
4,665,074	+		Echvi_3900	0.78	+0.0
4,665,074	+		Echvi_3900	0.78	-0.8
4,665,075	-		Echvi_3900	0.78	+2.9
4,665,075	-		Echvi_3900	0.78	+0.1
4,665,147	+		Echvi_3900	0.86	+0.1
4,665,148	-		Echvi_3900	0.86	-0.9
4,665,155	-		Echvi_3900	0.87	-0.5
4,665,193	-				-1.1
4,665,223	-				+0.1
4,665,238	+				+0.3
4,665,238	+				+0.3
4,665,241	+				+0.5
4,665,274	+				-0.5
4,665,283	-				-1.1
4,665,305	-				-0.3
4,665,306	+				-0.1
4,665,332	-				+0.2
4,665,358	+		Echvi_3901	0.18	+0.1
4,665,397	+		Echvi_3901	0.58	-1.1
4,665,433	-				-0.2
4,665,434	+				+1.3
4,665,434	+				-0.4
4,665,434	+				+0.2
4,665,435	-				+0.0
4,665,435	-				-1.1
4,665,443	-				-0.6
4,665,443	-				+0.9
4,665,474	+				-0.5
4,665,477	-				+2.1
4,665,511	+		Echvi_3902	0.14	-0.1
4,665,511	+		Echvi_3902	0.14	-0.7
4,665,511	+		Echvi_3902	0.14	-1.0
4,665,511	+				+2.1
4,665,512	-		Echvi_3902	0.14	+0.0
4,665,512	-		Echvi_3902	0.14	-1.2
4,665,514	-		Echvi_3902	0.15	-0.2
4,665,541	-		Echvi_3902	0.19	+0.4
4,665,606	-		Echvi_3902	0.31	-1.4
4,665,668	-		Echvi_3902	0.42	-2.3
4,665,685	+		Echvi_3902	0.45	-1.3
4,665,737	+		Echvi_3902	0.54	-1.8
4,665,849	+		Echvi_3902	0.73	-0.7
4,665,850	-		Echvi_3902	0.74	-1.4
4,665,850	-		Echvi_3902	0.74	+0.4
4,665,850	-		Echvi_3902	0.74	-0.6
4,665,932	+		Echvi_3902	0.88	-1.5
4,666,026	-				+0.5
4,666,080	+				+1.4
4,666,115	+				-0.5
4,666,116	-				-0.6
4,666,132	-				-0.0
4,666,132	-				+1.2
4,666,135	+				-0.0
4,666,135	+				-0.3
4,666,136	-				-2.6
4,666,136	-				-2.4
4,666,194	-				+0.5
4,666,194	-				-0.9
4,666,196	+		Echvi_3903	0.10	+2.4
4,666,196	+		Echvi_3903	0.10	+0.7
4,666,196	+		Echvi_3903	0.10	+0.5
4,666,197	-		Echvi_3903	0.10	+0.9
4,666,197	-		Echvi_3903	0.10	-0.3
4,666,201	-		Echvi_3903	0.11	-0.5
4,666,206	+		Echvi_3903	0.12	+1.2
4,666,221	-		Echvi_3903	0.15	-0.7
4,666,229	+		Echvi_3903	0.16	+0.2
4,666,265	+		Echvi_3903	0.22	-0.9