Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3790

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
4,521,771	-		Echvi_3789	0.39	-2.7
4,521,799	-		Echvi_3789	0.41	-1.9
4,521,926	+		Echvi_3789	0.49	-0.3
4,521,977	+		Echvi_3789	0.53	-0.9
4,521,977	+		Echvi_3789	0.53	-0.3
4,521,987	-		Echvi_3789	0.54	-0.2
4,522,000	-		Echvi_3789	0.54	-0.3
4,522,000	-		Echvi_3789	0.54	-0.9
4,522,024	-		Echvi_3789	0.56	-2.5
4,522,090	-		Echvi_3789	0.61	-0.2
4,522,090	-		Echvi_3789	0.61	-0.2
4,522,090	-		Echvi_3789	0.61	-1.2
4,522,092	-		Echvi_3789	0.61	+0.1
4,522,092	-		Echvi_3789	0.61	-1.7
4,522,092	-		Echvi_3789	0.61	-1.1
4,522,092	-		Echvi_3789	0.61	-1.6
4,522,092	-		Echvi_3789	0.61	-0.3
4,522,185	+		Echvi_3789	0.67	-0.3
4,522,186	-		Echvi_3789	0.67	+0.0
4,522,195	+		Echvi_3789	0.68	-1.8
4,522,230	-		Echvi_3789	0.70	-1.8
4,522,230	-		Echvi_3789	0.70	+0.3
4,522,365	+		Echvi_3789	0.80	-0.4
4,522,367	+		Echvi_3789	0.80	-0.7
4,522,368	-		Echvi_3789	0.80	-1.3
4,522,370	+		Echvi_3789	0.80	-0.4
4,522,374	+		Echvi_3789	0.80	-1.0
4,522,393	+		Echvi_3789	0.82	-0.7
4,522,394	-		Echvi_3789	0.82	+0.9
4,522,411	-		Echvi_3789	0.83	+1.5
4,522,475	+		Echvi_3789	0.87	-1.9
4,522,533	-				+0.4
4,522,601	+				-1.7
4,522,675	+				-0.0
4,522,675	+				+0.4
4,522,759	-				-1.3
4,522,770	+				-1.2
4,522,770	+				-0.1
4,522,830	+				-1.0
4,522,830	+				+0.7
4,522,830	+				-0.8
4,522,831	-				-2.2
4,522,865	-		Echvi_3790	0.12	-0.6
4,522,887	+		Echvi_3790	0.15	+0.7
4,522,950	+		Echvi_3790	0.23	-1.0
4,522,950	+		Echvi_3790	0.23	-0.0
4,522,951	-		Echvi_3790	0.24	+1.1
4,522,951	-		Echvi_3790	0.24	-0.6
4,522,951	-		Echvi_3790	0.24	+0.6
4,522,955	+		Echvi_3790	0.24	-1.3
4,522,956	-		Echvi_3790	0.24	-1.6
4,522,956	-		Echvi_3790	0.24	+0.1
4,523,051	-		Echvi_3790	0.37	+0.5
4,523,056	+		Echvi_3790	0.37	-0.3
4,523,067	+		Echvi_3790	0.39	-0.7
4,523,068	-		Echvi_3790	0.39	-1.2
4,523,128	-		Echvi_3790	0.47	-1.6
4,523,139	+		Echvi_3790	0.48	-1.3
4,523,267	+		Echvi_3790	0.65	+0.5
4,523,402	-		Echvi_3790	0.82	-1.2
4,523,407	-		Echvi_3790	0.83	-1.6
4,523,407	-		Echvi_3790	0.83	+1.1
4,523,410	+		Echvi_3790	0.83	-0.4
4,523,410	+		Echvi_3790	0.83	-1.5
4,523,410	+		Echvi_3790	0.83	+0.4
4,523,411	-		Echvi_3790	0.83	-0.8
4,523,411	-		Echvi_3790	0.83	-1.4
4,523,411	-		Echvi_3790	0.83	-1.6
4,523,412	+		Echvi_3790	0.83	-0.4
4,523,413	-		Echvi_3790	0.84	-2.0
4,523,413	-		Echvi_3790	0.84	-0.7
4,523,413	-		Echvi_3790	0.84	-1.2
4,523,435	+		Echvi_3790	0.86	-0.5
4,523,436	-		Echvi_3790	0.87	-1.5
4,523,443	+		Echvi_3790	0.87	-1.2
4,523,500	+				-0.6
4,523,500	+				+1.3
4,523,501	-				-0.6
4,523,501	-				-2.0
4,523,530	+				-0.4
4,523,533	-				+0.2
4,523,582	+				+0.5
4,523,691	+		Echvi_3791	0.13	+0.5
4,523,691	+		Echvi_3791	0.13	-0.6
4,523,691	+		Echvi_3791	0.13	+0.2
4,523,692	-		Echvi_3791	0.13	-0.5
4,523,791	+		Echvi_3791	0.21	+0.2
4,523,818	+		Echvi_3791	0.24	-0.1
4,523,855	-		Echvi_3791	0.27	-0.1
4,523,985	+		Echvi_3791	0.38	-1.0
4,523,988	+		Echvi_3791	0.38	-1.0
4,523,989	-		Echvi_3791	0.38	-0.4
4,523,990	-		Echvi_3791	0.38	+0.7
4,524,089	+		Echvi_3791	0.47	-0.6
4,524,089	+		Echvi_3791	0.47	-0.9
4,524,090	-		Echvi_3791	0.47	-2.2
4,524,213	-		Echvi_3791	0.58	-1.3
4,524,325	+		Echvi_3791	0.67	-0.9
4,524,431	+		Echvi_3791	0.76	-1.6
4,524,431	+		Echvi_3791	0.76	-1.5
4,524,459	-		Echvi_3791	0.79	-0.9