Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3636

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
4,317,947	+		Echvi_3635	0.27	-1.2
4,317,947	+		Echvi_3635	0.27	+0.0
4,317,947	+		Echvi_3635	0.27	-0.2
4,317,948	-		Echvi_3635	0.27	-0.9
4,317,948	-		Echvi_3635	0.27	+0.8
4,317,948	-		Echvi_3635	0.27	-0.9
4,317,948	-		Echvi_3635	0.27	-0.0
4,318,043	+		Echvi_3635	0.34	+0.4
4,318,108	-		Echvi_3635	0.39	+1.0
4,318,167	+		Echvi_3635	0.44	+1.2
4,318,168	-		Echvi_3635	0.44	+0.1
4,318,174	+		Echvi_3635	0.44	+0.9
4,318,174	+		Echvi_3635	0.44	-0.2
4,318,175	-		Echvi_3635	0.44	+0.5
4,318,188	+		Echvi_3635	0.45	-0.6
4,318,188	+		Echvi_3635	0.45	-2.7
4,318,189	-		Echvi_3635	0.45	+1.4
4,318,192	-		Echvi_3635	0.45	+0.8
4,318,218	-		Echvi_3635	0.47	+0.2
4,318,280	-		Echvi_3635	0.52	+0.4
4,318,280	-		Echvi_3635	0.52	-1.3
4,318,299	-		Echvi_3635	0.54	+0.5
4,318,299	-		Echvi_3635	0.54	-0.3
4,318,299	-		Echvi_3635	0.54	+1.1
4,318,464	+		Echvi_3635	0.66	-0.2
4,318,465	-		Echvi_3635	0.66	+0.6
4,318,524	+		Echvi_3635	0.71	-0.3
4,318,524	+		Echvi_3635	0.71	-1.0
4,318,525	-		Echvi_3635	0.71	+0.5
4,318,553	-		Echvi_3635	0.73	+2.2
4,318,555	+		Echvi_3635	0.73	-0.6
4,318,555	+		Echvi_3635	0.73	-1.2
4,318,584	+		Echvi_3635	0.75	+0.8
4,318,584	+		Echvi_3635	0.75	+0.7
4,318,584	+		Echvi_3635	0.75	+0.4
4,318,584	+		Echvi_3635	0.75	-0.4
4,318,585	-		Echvi_3635	0.75	+0.1
4,318,585	-		Echvi_3635	0.75	-0.6
4,318,585	-		Echvi_3635	0.75	+0.1
4,318,585	-		Echvi_3635	0.75	+0.2
4,318,585	-		Echvi_3635	0.75	+0.8
4,318,585	-		Echvi_3635	0.75	+1.0
4,318,585	-		Echvi_3635	0.75	+0.2
4,318,586	+		Echvi_3635	0.75	-0.2
4,318,586	+		Echvi_3635	0.75	-0.2
4,318,587	-		Echvi_3635	0.75	+0.6
4,318,664	+		Echvi_3635	0.81	+0.4
4,318,664	+		Echvi_3635	0.81	+0.2
4,318,664	+		Echvi_3635	0.81	+0.8
4,318,665	-		Echvi_3635	0.81	+1.2
4,318,931	-				-0.1
4,318,938	+				+1.2
4,318,938	+				+0.1
4,318,939	-				+0.0
4,318,941	+				+1.7
4,318,942	-				-0.2
4,318,965	+				-1.7
4,318,968	+				-0.3
4,319,138	+		Echvi_3636	0.20	-1.2
4,319,140	+		Echvi_3636	0.21	+0.6
4,319,140	+		Echvi_3636	0.21	-0.4
4,319,140	+		Echvi_3636	0.21	-1.2
4,319,141	-		Echvi_3636	0.21	+3.4
4,319,142	+		Echvi_3636	0.21	-0.5
4,319,142	+		Echvi_3636	0.21	-2.5
4,319,235	+		Echvi_3636	0.30	-0.4
4,319,235	+		Echvi_3636	0.30	-0.2
4,319,235	+		Echvi_3636	0.30	+0.0
4,319,235	+		Echvi_3636	0.30	+1.1
4,319,235	+		Echvi_3636	0.30	+1.8
4,319,236	-		Echvi_3636	0.30	-0.2
4,319,236	-		Echvi_3636	0.30	-1.6
4,319,236	-		Echvi_3636	0.30	+0.6
4,319,236	-		Echvi_3636	0.30	+0.6
4,319,236	-		Echvi_3636	0.30	-0.1
4,319,236	-		Echvi_3636	0.30	+1.2
4,319,236	-		Echvi_3636	0.30	+0.4
4,319,259	-		Echvi_3636	0.33	+0.3
4,319,259	-		Echvi_3636	0.33	+0.9
4,319,268	+		Echvi_3636	0.33	-0.2
4,319,278	-		Echvi_3636	0.34	-1.2
4,319,278	-		Echvi_3636	0.34	-0.4
4,319,310	-		Echvi_3636	0.38	-0.4
4,319,343	+		Echvi_3636	0.41	-0.5
4,319,344	-		Echvi_3636	0.41	+0.3
4,319,352	+		Echvi_3636	0.42	-0.6
4,319,560	-		Echvi_3636	0.63	-1.2
4,319,560	-		Echvi_3636	0.63	-0.8
4,319,628	+		Echvi_3636	0.70	+0.2
4,319,636	-		Echvi_3636	0.71	+0.4
4,319,829	+				+1.0
4,319,880	-				-1.3
4,319,881	+				-1.7
4,319,892	-				+0.2
4,319,892	-				-0.2
4,319,927	-				+0.2
4,319,929	-				-1.8
4,319,949	-				-0.6
4,319,949	-				+0.3
4,319,977	-				-0.1
4,320,025	-				+0.6
4,320,027	+				-0.0
4,320,028	-				-0.6
4,320,028	-				-0.3
4,320,083	+				+0.2
4,320,144	-				-0.6
4,320,153	-				-1.0
4,320,204	+				-0.6
4,320,205	-				-1.8
4,320,214	+				+0.0
4,320,214	+				-1.4
4,320,214	+				+0.8
4,320,281	-				-2.1
4,320,313	-				+0.3
4,320,341	+				-0.8
4,320,361	+				+0.6
4,320,385	-				+1.1
4,320,399	-				-0.5
4,320,407	-				+1.7
4,320,428	+				+0.9
4,320,430	+				+0.1
4,320,430	+				+0.6
4,320,430	+				+0.7
4,320,431	-				-1.0
4,320,448	+				-0.0
4,320,448	+				-1.7
4,320,451	+				+1.2
4,320,452	-				-1.1
4,320,452	-				+0.9
4,320,452	-				-2.5
4,320,452	-				-0.5
4,320,452	-				-1.3
4,320,453	+				-0.0
4,320,453	+				-1.0
4,320,453	+				-0.2
4,320,502	+				+0.2
4,320,530	+				+4.4
4,320,531	-				+4.2
4,320,560	-				+1.6
4,320,562	+				+1.5
4,320,563	-				+2.7
4,320,563	-				+1.9
4,320,647	+		Echvi_3637	0.15	+0.3
4,320,648	-		Echvi_3637	0.15	+2.3
4,320,715	-		Echvi_3637	0.22	+2.8
4,320,809	-		Echvi_3637	0.32	+1.0
4,320,844	+		Echvi_3637	0.35	-1.5
4,320,844	+		Echvi_3637	0.35	+0.9
4,320,845	-		Echvi_3637	0.35	+0.2
4,320,867	-		Echvi_3637	0.38	+2.8
4,320,877	+		Echvi_3637	0.39	+1.2