Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3555

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
4,213,619	+		Echvi_3554	0.81	-0.1
4,213,632	+		Echvi_3554	0.86	-0.2
4,213,723	+				-1.0
4,213,727	+				+0.5
4,213,727	+				+0.0
4,213,727	+				-1.1
4,213,728	-				-0.2
4,213,728	-				-0.4
4,213,740	+				+0.1
4,213,749	-				-1.1
4,213,750	+				-0.8
4,213,750	+				-0.9
4,213,872	-				+1.1
4,213,886	-				-0.7
4,213,886	-				+0.3
4,213,930	-				-0.6
4,213,979	+				+1.1
4,213,979	+				-0.6
4,213,979	+				-0.8
4,213,980	-				+1.4
4,213,990	+				-0.2
4,213,990	+				+0.4
4,213,990	+				+0.5
4,213,990	+				+1.3
4,213,991	-				+1.6
4,214,002	-				-0.4
4,214,062	+				-1.0
4,214,063	-				+0.7
4,214,063	-				-0.3
4,214,063	-				+0.0
4,214,076	+				-0.9
4,214,077	-				-2.3
4,214,112	-				+1.9
4,214,176	-				-0.7
4,214,176	-				+0.6
4,214,181	-				+2.0
4,214,181	-				-0.3
4,214,225	-				-0.3
4,214,225	-				+0.6
4,214,225	-				+0.6
4,214,225	-				-0.1
4,214,226	+				-1.4
4,214,254	-				+0.7
4,214,399	+				-0.9
4,214,417	-				-0.4
4,214,422	+				-0.7
4,214,427	+				+0.1
4,214,447	+				-0.1
4,214,447	+				-0.5
4,214,448	-				-0.2
4,214,448	-				-0.1
4,214,448	-				-0.3
4,214,448	-				+1.3
4,214,473	-				+0.8
4,214,509	+				+0.1
4,214,516	+				-0.4
4,214,517	-				-1.8
4,214,517	-				+0.9
4,214,519	+				-1.1
4,214,520	-				-0.7
4,214,522	+				-0.2
4,214,522	+				+1.1
4,214,523	-				-0.4
4,214,523	-				-0.1
4,214,523	-				-0.8
4,214,581	+				-1.6
4,214,582	-				-1.0
4,214,582	-				+0.6
4,214,629	-				-0.6
4,214,643	+				-0.8
4,214,643	+				+3.1
4,214,644	-				+0.1
4,214,644	-				-2.3
4,214,676	-				+0.0
4,214,676	-				+0.3
4,214,676	-				+0.9
4,214,846	+		Echvi_3555	0.18	+0.8
4,214,846	+		Echvi_3555	0.18	-0.7
4,214,847	-		Echvi_3555	0.18	+0.9
4,214,847	-		Echvi_3555	0.18	+1.1
4,214,848	+		Echvi_3555	0.18	+0.2
4,214,849	-		Echvi_3555	0.18	+1.1
4,214,860	+		Echvi_3555	0.19	-1.2
4,214,860	+		Echvi_3555	0.19	-0.7
4,214,914	+		Echvi_3555	0.23	+0.4
4,214,929	-		Echvi_3555	0.24	-0.2
4,214,929	-		Echvi_3555	0.24	+0.5
4,214,932	+		Echvi_3555	0.24	-0.1
4,214,938	+		Echvi_3555	0.24	-0.5
4,214,948	-		Echvi_3555	0.25	-0.5
4,214,948	-		Echvi_3555	0.25	+0.4
4,215,119	+		Echvi_3555	0.37	+0.1
4,215,120	-		Echvi_3555	0.37	+0.4
4,215,120	-		Echvi_3555	0.37	-0.3
4,215,120	-		Echvi_3555	0.37	-0.8
4,215,121	+		Echvi_3555	0.37	+0.4
4,215,164	-		Echvi_3555	0.40	+1.3
4,215,200	+		Echvi_3555	0.42	+1.3
4,215,281	+		Echvi_3555	0.48	-0.5
4,215,288	+		Echvi_3555	0.48	-0.2
4,215,365	-		Echvi_3555	0.54	-0.5
4,215,365	-		Echvi_3555	0.54	-0.7
4,215,397	-		Echvi_3555	0.56	-0.4
4,215,397	-		Echvi_3555	0.56	+0.3
4,215,406	-		Echvi_3555	0.57	-0.1
4,215,502	-		Echvi_3555	0.63	-1.2
4,215,502	-		Echvi_3555	0.63	-0.9
4,215,502	-		Echvi_3555	0.63	-0.2
4,215,502	-		Echvi_3555	0.63	+0.8
4,215,504	+		Echvi_3555	0.63	+1.0
4,215,504	+		Echvi_3555	0.63	-1.0
4,215,511	+		Echvi_3555	0.64	+1.3
4,215,511	+		Echvi_3555	0.64	+0.3
4,215,512	-		Echvi_3555	0.64	+0.3
4,215,512	-		Echvi_3555	0.64	+1.5
4,215,533	-		Echvi_3555	0.65	-1.2
4,215,533	-		Echvi_3555	0.65	-0.6
4,215,612	+		Echvi_3555	0.71	+0.5
4,215,613	-		Echvi_3555	0.71	+1.7
4,215,672	+		Echvi_3555	0.75	+0.9
4,215,672	+		Echvi_3555	0.75	-0.4
4,215,673	-		Echvi_3555	0.75	+0.9
4,215,698	-		Echvi_3555	0.77	-1.9
4,215,707	-		Echvi_3555	0.77	+0.4
4,215,750	+		Echvi_3555	0.80	+0.5
4,215,768	+		Echvi_3555	0.81	-0.7
4,215,769	-		Echvi_3555	0.81	-0.9
4,215,978	+				+1.6
4,215,989	+				-0.1
4,216,037	+				-1.3
4,216,114	+				-1.0
4,216,235	+				-0.1
4,216,240	+				+0.4
4,216,241	-				-1.2
4,216,305	-				+1.1
4,216,312	-				+1.1
4,216,357	-				-0.4
4,216,417	+		Echvi_3556	0.14	-0.3
4,216,417	+		Echvi_3556	0.14	+0.2
4,216,417	+		Echvi_3556	0.14	+1.7
4,216,471	-		Echvi_3556	0.18	-0.2
4,216,510	+		Echvi_3556	0.22	+1.6
4,216,511	-		Echvi_3556	0.22	+0.8
4,216,551	+		Echvi_3556	0.25	-2.5
4,216,598	-		Echvi_3556	0.29	+0.7
4,216,598	-		Echvi_3556	0.29	-0.4
4,216,598	-		Echvi_3556	0.29	+1.6
4,216,598	-		Echvi_3556	0.29	+0.3
4,216,664	-		Echvi_3556	0.35	-2.9
4,216,664	-		Echvi_3556	0.35	+1.1
4,216,664	-		Echvi_3556	0.35	-0.5
4,216,699	-		Echvi_3556	0.38	-0.0
4,216,714	+		Echvi_3556	0.39	-0.2
4,216,714	+		Echvi_3556	0.39	-0.2
4,216,715	-		Echvi_3556	0.39	+1.8
4,216,715	-		Echvi_3556	0.39	+0.4
4,216,746	+		Echvi_3556	0.42	-0.4
4,216,747	-		Echvi_3556	0.42	+0.0
4,216,772	+		Echvi_3556	0.44	+0.3
4,216,792	-		Echvi_3556	0.45	-0.1
4,216,823	-		Echvi_3556	0.48	-1.1
4,216,843	+		Echvi_3556	0.50	-0.4
4,216,843	+		Echvi_3556	0.50	+0.1
4,216,843	+		Echvi_3556	0.50	-0.9
4,216,844	-		Echvi_3556	0.50	-0.2
4,216,884	-		Echvi_3556	0.53	-0.1
4,216,884	-		Echvi_3556	0.53	+1.1
4,216,885	+		Echvi_3556	0.53	-1.0
4,216,886	-		Echvi_3556	0.53	-0.9
4,216,894	-		Echvi_3556	0.54	+1.6
4,216,939	+		Echvi_3556	0.58	-0.6
4,216,940	-		Echvi_3556	0.58	-1.4
4,217,015	+		Echvi_3556	0.64	-1.2
4,217,015	+		Echvi_3556	0.64	-0.9
4,217,015	+		Echvi_3556	0.64	-0.5