Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3439

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
4,069,325	+				+0.1
4,069,332	+				+1.3
4,069,454	+		Echvi_3439	0.15	-0.9
4,069,462	+		Echvi_3439	0.15	+0.2
4,069,462	+		Echvi_3439	0.15	+1.1
4,069,468	+		Echvi_3439	0.16	+0.4
4,069,468	+		Echvi_3439	0.16	+0.1
4,069,469	-		Echvi_3439	0.16	-0.2
4,069,470	+		Echvi_3439	0.16	-1.0
4,069,470	+		Echvi_3439	0.16	+1.5
4,069,470	+		Echvi_3439	0.16	-0.0
4,069,471	-		Echvi_3439	0.16	-0.9
4,069,502	-		Echvi_3439	0.19	-0.4
4,069,556	+		Echvi_3439	0.25	-0.4
4,069,556	+		Echvi_3439	0.25	-0.0
4,069,576	-		Echvi_3439	0.26	+0.8
4,069,636	+		Echvi_3439	0.32	-0.8
4,069,642	+		Echvi_3439	0.33	+0.5
4,069,643	-		Echvi_3439	0.33	-0.7
4,069,643	-		Echvi_3439	0.33	-0.7
4,069,646	-		Echvi_3439	0.33	+0.9
4,069,674	+		Echvi_3439	0.36	+0.2
4,069,674	+		Echvi_3439	0.36	-1.2
4,069,674	+		Echvi_3439	0.36	-0.3
4,069,674	+		Echvi_3439	0.36	-0.7
4,069,675	-		Echvi_3439	0.36	+0.1
4,069,675	-		Echvi_3439	0.36	+0.2
4,069,678	+		Echvi_3439	0.36	-2.3
4,069,679	-		Echvi_3439	0.36	+2.0
4,069,726	+		Echvi_3439	0.41	-0.5
4,069,727	-		Echvi_3439	0.41	-1.7
4,069,805	-		Echvi_3439	0.49	-1.9
4,069,877	+		Echvi_3439	0.56	-0.2
4,069,891	+		Echvi_3439	0.57	-0.3
4,069,892	-		Echvi_3439	0.57	-1.7
4,069,892	-				+0.1
4,069,913	-		Echvi_3439	0.59	+0.2
4,069,915	+		Echvi_3439	0.59	-0.2
4,069,915	+		Echvi_3439	0.59	+0.1
4,069,915	+		Echvi_3439	0.59	-2.3
4,069,916	-		Echvi_3439	0.59	+1.1
4,069,916	-		Echvi_3439	0.59	+1.2
4,069,922	+		Echvi_3439	0.60	-1.3
4,069,952	+		Echvi_3439	0.63	-0.9
4,069,953	-		Echvi_3439	0.63	+0.1
4,069,972	+		Echvi_3439	0.65	-2.0
4,069,974	+		Echvi_3439	0.65	-0.2
4,069,975	-		Echvi_3439	0.65	-0.2
4,069,975	-		Echvi_3439	0.65	-0.9
4,070,031	+		Echvi_3439	0.71	+0.5
4,070,031	+		Echvi_3439	0.71	+1.1
4,070,032	-		Echvi_3439	0.71	+0.7
4,070,143	+		Echvi_3439	0.81	-1.0
4,070,143	+		Echvi_3439	0.81	-0.7
4,070,173	-		Echvi_3439	0.84	-0.2
4,070,173	-		Echvi_3439	0.84	-0.7
4,070,173	-		Echvi_3439	0.84	+1.3
4,070,175	+		Echvi_3439	0.84	-0.1
4,070,178	+		Echvi_3439	0.85	+0.1
4,070,250	+				-0.8
4,070,266	-				-0.2
4,070,269	-				+0.1
4,070,376	+				-0.2
4,070,388	+				+1.1
4,070,388	+				+0.4
4,070,388	+				+0.3
4,070,389	-				+0.2
4,070,405	-				+1.4
4,070,405	-				-1.6
4,070,409	-				+2.9
4,070,409	-				+1.8
4,070,410	+				+2.3
4,070,446	+				+1.3
4,070,447	-				+2.9
4,070,798	-		Echvi_3440	0.56	+2.9
4,070,835	+		Echvi_3440	0.61	+2.1
4,070,862	+		Echvi_3440	0.65	+3.0
4,070,864	+		Echvi_3440	0.65	+1.1
4,070,889	-		Echvi_3440	0.69	+2.3
4,071,111	+				+0.4
4,071,111	+				-1.0
4,071,112	-				+0.3
4,071,214	+				-0.1
4,071,254	+				+0.5
4,071,254	+				+1.1