Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3394

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
4,007,543	+		Echvi_3393	0.39	-0.7
4,007,585	-		Echvi_3393	0.42	+0.0
4,007,661	+		Echvi_3393	0.46	+1.5
4,007,661	+		Echvi_3393	0.46	+0.8
4,007,694	+		Echvi_3393	0.48	-0.7
4,007,694	+		Echvi_3393	0.48	-0.3
4,007,694	+		Echvi_3393	0.48	-1.3
4,007,694	+		Echvi_3393	0.48	-0.7
4,007,695	-		Echvi_3393	0.49	+0.2
4,007,869	+		Echvi_3393	0.59	-1.2
4,007,870	-		Echvi_3393	0.59	-0.3
4,007,870	-		Echvi_3393	0.59	-0.9
4,007,870	-		Echvi_3393	0.59	+0.2
4,008,061	-		Echvi_3393	0.71	+0.3
4,008,066	+		Echvi_3393	0.72	-0.7
4,008,100	+		Echvi_3393	0.74	-0.1
4,008,100	+		Echvi_3393	0.74	-2.2
4,008,101	-		Echvi_3393	0.74	-0.2
4,008,102	+		Echvi_3393	0.74	+1.5
4,008,102	+		Echvi_3393	0.74	-0.6
4,008,103	-		Echvi_3393	0.74	-0.5
4,008,290	-		Echvi_3393	0.86	-0.1
4,008,298	+		Echvi_3393	0.86	+0.5
4,008,323	-		Echvi_3393	0.88	-0.7
4,008,447	+				+2.4
4,008,453	+				+0.3
4,008,480	-				-0.9
4,008,480	-				+0.1
4,008,480	-				-0.9
4,008,483	+				-1.0
4,008,484	-				+2.1
4,008,488	+				-0.1
4,008,546	+				-0.1
4,008,653	+				-1.1
4,008,687	+				-0.4
4,008,750	+		Echvi_3394	0.14	+0.3
4,008,751	-		Echvi_3394	0.14	-1.4
4,008,773	+		Echvi_3394	0.15	-1.9
4,008,774	-		Echvi_3394	0.15	+0.5
4,008,831	+		Echvi_3394	0.19	-0.2
4,008,836	+		Echvi_3394	0.19	+2.3
4,008,836	+		Echvi_3394	0.19	+0.8
4,008,852	+		Echvi_3394	0.20	+0.6
4,008,852	+		Echvi_3394	0.20	-0.9
4,008,853	-		Echvi_3394	0.20	-0.9
4,008,853	-		Echvi_3394	0.20	-0.8
4,008,857	+		Echvi_3394	0.21	+1.5
4,008,858	-		Echvi_3394	0.21	-1.8
4,008,858	-		Echvi_3394	0.21	-0.7
4,008,881	-		Echvi_3394	0.22	-0.7
4,008,906	+		Echvi_3394	0.24	+2.1
4,009,052	+		Echvi_3394	0.33	-1.8
4,009,073	+		Echvi_3394	0.34	-0.2
4,009,074	-		Echvi_3394	0.34	-0.8
4,009,297	+		Echvi_3394	0.48	-0.2
4,009,298	-		Echvi_3394	0.48	-0.3
4,009,298	-		Echvi_3394	0.48	-0.5
4,009,298	-		Echvi_3394	0.48	+0.1
4,009,300	-		Echvi_3394	0.48	+0.7
4,009,300	-		Echvi_3394	0.48	-0.6
4,009,375	-		Echvi_3394	0.53	-0.3
4,009,395	+		Echvi_3394	0.54	-0.1
4,009,396	-		Echvi_3394	0.54	-1.0
4,009,464	-		Echvi_3394	0.59	-0.7
4,009,471	-		Echvi_3394	0.59	-1.3
4,009,471	-		Echvi_3394	0.59	+0.1
4,009,471	-		Echvi_3394	0.59	-0.9
4,009,497	+		Echvi_3394	0.61	-0.4
4,009,498	-		Echvi_3394	0.61	-1.8
4,009,532	-		Echvi_3394	0.63	+0.3
4,009,538	-		Echvi_3394	0.63	-2.1
4,009,547	+		Echvi_3394	0.64	+0.4
4,009,547	+		Echvi_3394	0.64	-0.7
4,009,561	-		Echvi_3394	0.65	-0.5
4,009,563	+		Echvi_3394	0.65	-0.7
4,009,563	+		Echvi_3394	0.65	+2.1
4,009,650	+		Echvi_3394	0.70	-0.2
4,009,650	+		Echvi_3394	0.70	+0.5
4,009,650	+		Echvi_3394	0.70	+0.5
4,009,650	+		Echvi_3394	0.70	-0.7
4,009,650	+		Echvi_3394	0.70	+1.1
4,009,650	+		Echvi_3394	0.70	-1.3
4,009,652	+		Echvi_3394	0.71	+0.2
4,009,653	-		Echvi_3394	0.71	-1.0
4,009,653	-		Echvi_3394	0.71	-0.0
4,009,679	+		Echvi_3394	0.72	-0.9
4,009,679	+		Echvi_3394	0.72	-0.4
4,009,680	-		Echvi_3394	0.72	-0.1
4,009,680	-		Echvi_3394	0.72	-0.1
4,009,684	-		Echvi_3394	0.73	-0.1
4,009,684	-		Echvi_3394	0.73	-2.4
4,009,684	-		Echvi_3394	0.73	+0.9
4,009,684	-		Echvi_3394	0.73	-0.5
4,009,684	-		Echvi_3394	0.73	-0.5
4,009,684	-		Echvi_3394	0.73	+0.6
4,009,709	+		Echvi_3394	0.74	-1.7
4,009,709	+		Echvi_3394	0.74	+0.5
4,009,740	+		Echvi_3394	0.76	-1.7
4,009,740	+		Echvi_3394	0.76	+0.3
4,009,741	-		Echvi_3394	0.76	-0.2
4,009,741	-		Echvi_3394	0.76	+1.0
4,009,741	-		Echvi_3394	0.76	+0.2
4,009,815	+		Echvi_3394	0.81	+1.1
4,009,815	+		Echvi_3394	0.81	+0.3
4,009,816	-		Echvi_3394	0.81	-0.6
4,009,816	-		Echvi_3394	0.81	+0.6
4,009,816	-		Echvi_3394	0.81	-1.3
4,009,818	-		Echvi_3394	0.81	+0.1
4,009,818	-		Echvi_3394	0.81	+0.1
4,009,822	+		Echvi_3394	0.81	-0.6
4,009,823	-		Echvi_3394	0.81	+0.5
4,009,823	-		Echvi_3394	0.81	-0.8
4,009,824	+		Echvi_3394	0.81	-1.7
4,009,824	+		Echvi_3394	0.81	-1.7
4,009,825	-		Echvi_3394	0.81	-0.6
4,009,825	-		Echvi_3394	0.81	-0.3
4,009,858	+		Echvi_3394	0.83	-1.1
4,009,859	-		Echvi_3394	0.84	-1.1
4,009,926	+		Echvi_3394	0.88	-0.3
4,009,927	-		Echvi_3394	0.88	-1.2
4,009,991	-				+3.1
4,009,993	+				-0.1
4,009,993	+				-1.2
4,010,025	-				-2.0
4,010,035	+				-0.4
4,010,035	+				-1.0
4,010,035	+				+0.4
4,010,036	-				-0.5
4,010,112	-				+0.9
4,010,116	-				+0.7
4,010,116	-				+0.3
4,010,142	+				+0.2
4,010,152	+				-0.1
4,010,152	+				-0.9
4,010,152	+				+1.1
4,010,152	+				+0.8
4,010,152	+				+0.5
4,010,153	-				+0.2
4,010,230	-				-0.2
4,010,254	+				-1.0
4,010,267	+				+0.8
4,010,267	+				+1.2
4,010,293	+				-0.5
4,010,293	+				+0.5
4,010,328	+				-0.5
4,010,328	+				+0.3
4,010,328	+				+0.5
4,010,411	+				+0.7
4,010,411	+				-0.3
4,010,412	-				-0.7
4,010,451	-		Echvi_3395	0.10	+0.4
4,010,451	-		Echvi_3395	0.10	-0.1
4,010,499	+		Echvi_3395	0.12	-0.8
4,010,535	-		Echvi_3395	0.13	-1.9
4,010,548	-		Echvi_3395	0.14	-1.1
4,010,585	-		Echvi_3395	0.15	+0.4
4,010,684	+		Echvi_3395	0.18	-2.4
4,010,723	+		Echvi_3395	0.19	-1.7
4,010,740	+		Echvi_3395	0.20	-1.0
4,010,740	+		Echvi_3395	0.20	-0.3
4,010,741	-		Echvi_3395	0.20	+0.8
4,010,903	+		Echvi_3395	0.25	+0.7
4,010,906	-		Echvi_3395	0.25	+0.2
4,010,912	-		Echvi_3395	0.25	+0.5
4,010,934	+		Echvi_3395	0.26	-1.1
4,010,951	+		Echvi_3395	0.27	-0.9
4,010,951	+				+2.1
4,010,951	+		Echvi_3395	0.27	-0.8
4,010,952	-		Echvi_3395	0.27	-0.7
4,010,952	-		Echvi_3395	0.27	-1.3
4,010,952	-		Echvi_3395	0.27	+0.0
4,010,952	-		Echvi_3395	0.27	-0.4
4,010,952	-		Echvi_3395	0.27	+0.6
4,010,954	-		Echvi_3395	0.27	-1.5
4,010,987	-		Echvi_3395	0.28	-0.5
4,011,019	-		Echvi_3395	0.29	+1.5
4,011,036	-		Echvi_3395	0.29	+0.2
4,011,038	+		Echvi_3395	0.29	-2.2
4,011,039	-		Echvi_3395	0.29	-1.3