Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3377

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
3,983,211	+		Echvi_3376	0.24	+1.7
3,983,260	+		Echvi_3376	0.30	-0.9
3,983,260	+		Echvi_3376	0.30	-1.9
3,983,261	-		Echvi_3376	0.30	+0.8
3,983,261	-		Echvi_3376	0.30	-0.9
3,983,374	+		Echvi_3376	0.43	-0.1
3,983,444	+		Echvi_3376	0.51	+1.5
3,983,534	-		Echvi_3376	0.62	+0.2
3,983,630	-		Echvi_3376	0.73	+0.5
3,983,630	-		Echvi_3376	0.73	-1.5
3,983,630	-		Echvi_3376	0.73	+0.1
3,983,676	+		Echvi_3376	0.79	-0.3
3,983,676	+		Echvi_3376	0.79	-0.1
3,983,677	-		Echvi_3376	0.79	+0.1
3,983,700	-		Echvi_3376	0.81	-0.6
3,983,700	-		Echvi_3376	0.81	+1.0
3,983,833	-				+2.1
3,983,833	-				+0.3
3,983,833	-				-0.3
3,983,833	-				-0.3
3,983,919	+				+0.0
3,984,054	+				+0.2
3,984,055	-				+1.1
3,984,055	-				+0.2
3,984,055	-				+2.7
3,984,057	+				-0.0
3,984,057	+				-0.4
3,984,058	-				-1.9
3,984,058	-				+0.2
3,984,058	-				+0.2
3,984,058	-				+1.1
3,984,061	+				+0.3
3,984,061	+				+0.4
3,984,097	+				-1.7
3,984,097	+				+1.0
3,984,131	-				+1.0
3,984,131	-				+1.3
3,984,148	+				+0.7
3,984,148	+				+1.1
3,984,149	-				-0.0
3,984,149	-				+0.6
3,984,186	-				+1.3
3,984,201	+				-0.2
3,984,202	-				+1.5
3,984,202	-				-1.1
3,984,210	+				+1.1
3,984,213	-				+0.8
3,984,222	+				-0.2
3,984,222	+				+0.3
3,984,222	+				-0.7
3,984,222	+				+1.1
3,984,223	-				-0.5
3,984,223	-				+0.5
3,984,223	-				+0.4
3,984,225	+				-0.3
3,984,226	-				+0.0
3,984,282	+		Echvi_3377	0.21	+2.8
3,984,283	-		Echvi_3377	0.22	+1.7
3,984,356	-		Echvi_3377	0.37	+0.7
3,984,356	-		Echvi_3377	0.37	-0.5
3,984,427	-		Echvi_3377	0.53	-0.0
3,984,471	+		Echvi_3377	0.63	-0.3
3,984,564	+		Echvi_3377	0.83	+0.3
3,984,565	-		Echvi_3377	0.83	-2.2
3,984,565	-		Echvi_3377	0.83	+0.3
3,984,606	-				-1.0
3,984,755	-		Echvi_3378	0.17	+1.0
3,984,765	-		Echvi_3378	0.20	+1.9
3,984,844	-		Echvi_3378	0.46	+0.9
3,984,845	+		Echvi_3378	0.46	+0.7
3,984,846	-		Echvi_3378	0.47	+2.1
3,984,905	-		Echvi_3378	0.66	+1.1
3,984,943	+		Echvi_3378	0.78	-1.6
3,984,963	+		Echvi_3378	0.85	-2.0
3,984,983	-				+2.3
3,984,997	-				+1.6
3,985,033	-				+0.2
3,985,036	-				+0.1
3,985,036	-				+1.0
3,985,072	+				+2.3
3,985,072	+				+0.1
3,985,073	-				+0.4
3,985,192	-				+1.8
3,985,202	+		Echvi_3379	0.10	-0.7
3,985,202	+		Echvi_3379	0.10	+0.0
3,985,202	+		Echvi_3379	0.10	-0.9
3,985,203	-		Echvi_3379	0.10	+1.5
3,985,314	+		Echvi_3379	0.16	-0.4
3,985,315	-		Echvi_3379	0.16	+0.8
3,985,346	+		Echvi_3379	0.18	+0.7
3,985,347	-		Echvi_3379	0.18	+0.9
3,985,351	+		Echvi_3379	0.18	+0.7
3,985,370	+		Echvi_3379	0.19	-0.0
3,985,394	+		Echvi_3379	0.21	+0.8
3,985,412	+		Echvi_3379	0.22	-0.8
3,985,413	-		Echvi_3379	0.22	-0.9
3,985,493	+		Echvi_3379	0.26	+0.6
3,985,494	-		Echvi_3379	0.26	+0.6