Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3349

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
3,952,257	+		Echvi_3348	0.43	-0.2
3,952,257	+		Echvi_3348	0.43	-2.3
3,952,260	-		Echvi_3348	0.43	-1.3
3,952,314	+		Echvi_3348	0.48	-0.2
3,952,336	+		Echvi_3348	0.49	-0.2
3,952,336	+		Echvi_3348	0.49	+0.1
3,952,337	-		Echvi_3348	0.49	-2.9
3,952,411	-		Echvi_3348	0.56	+0.3
3,952,497	+		Echvi_3348	0.63	+0.5
3,952,550	+		Echvi_3348	0.67	-0.5
3,952,559	+		Echvi_3348	0.68	+0.4
3,952,577	-		Echvi_3348	0.69	-0.8
3,952,760	-		Echvi_3348	0.85	-1.5
3,952,775	+		Echvi_3348	0.86	-2.0
3,952,922	-				-0.1
3,952,925	-				-2.0
3,952,937	+				-0.4
3,952,981	+				-0.6
3,952,981	+				+1.8
3,953,008	+				-0.5
3,953,008	+				+0.1
3,953,009	-				+1.2
3,953,010	+				-0.4
3,953,010	+				-2.1
3,953,010	+				-1.4
3,953,011	-				+2.1
3,953,011	-				+0.1
3,953,011	-				+2.1
3,953,011	-				+0.5
3,953,011	-				-0.9
3,953,014	+				-1.5
3,953,014	+				+0.5
3,953,073	-				+0.4
3,953,088	+				-0.1
3,953,089	-				+0.3
3,953,091	+				+1.1
3,953,091	+				+0.1
3,953,091	+				-0.3
3,953,091	+				-1.0
3,953,091	+				-0.8
3,953,091	+				+1.5
3,953,092	-				+0.7
3,953,092	-				-0.6
3,953,092	-				+1.6
3,953,092	-				-0.0
3,953,119	-				+1.7
3,953,179	-				+1.2
3,953,179	-				+0.2
3,953,189	+				+0.6
3,953,369	+		Echvi_3349	0.19	+1.9
3,953,370	-		Echvi_3349	0.19	-2.9
3,953,386	+		Echvi_3349	0.20	+2.1
3,953,391	+		Echvi_3349	0.21	-0.2
3,953,435	+		Echvi_3349	0.26	+0.5
3,953,436	-		Echvi_3349	0.26	-0.3
3,953,454	+		Echvi_3349	0.28	-0.0
3,953,454	+		Echvi_3349	0.28	-1.2
3,953,454	+		Echvi_3349	0.28	+1.0
3,953,454	+		Echvi_3349	0.28	-1.1
3,953,455	-		Echvi_3349	0.28	+1.1
3,953,455	-		Echvi_3349	0.28	+0.5
3,953,455	-		Echvi_3349	0.28	-0.4
3,953,455	-		Echvi_3349	0.28	+2.9
3,953,455	-		Echvi_3349	0.28	-1.8
3,953,456	+		Echvi_3349	0.28	-0.4
3,953,456	+		Echvi_3349	0.28	+0.1
3,953,456	+		Echvi_3349	0.28	+0.8
3,953,456	+		Echvi_3349	0.28	+2.7
3,953,456	+		Echvi_3349	0.28	+0.4
3,953,456	+		Echvi_3349	0.28	+0.5
3,953,456	+		Echvi_3349	0.28	+0.0
3,953,456	+		Echvi_3349	0.28	-1.3
3,953,457	-		Echvi_3349	0.28	+1.3
3,953,457	-		Echvi_3349	0.28	+0.5
3,953,457	-		Echvi_3349	0.28	-1.2
3,953,495	+		Echvi_3349	0.33	+2.1
3,953,495	+		Echvi_3349	0.33	+0.1
3,953,498	-		Echvi_3349	0.33	-0.1
3,953,516	+		Echvi_3349	0.35	+0.5
3,953,531	-		Echvi_3349	0.37	+0.2
3,953,662	-		Echvi_3349	0.52	-0.3
3,953,694	+		Echvi_3349	0.55	+1.7
3,953,716	+		Echvi_3349	0.58	+0.1
3,953,726	-		Echvi_3349	0.59	+0.9
3,953,820	+		Echvi_3349	0.69	+0.2
3,953,821	-		Echvi_3349	0.69	+1.5
3,953,821	-		Echvi_3349	0.69	+0.4
3,953,821	-		Echvi_3349	0.69	-0.1
3,953,860	+		Echvi_3349	0.74	+0.7
3,953,865	+		Echvi_3349	0.74	+0.0
3,953,872	+		Echvi_3349	0.75	+1.7
3,953,873	-		Echvi_3349	0.75	+0.1
3,953,917	+		Echvi_3349	0.80	+1.1
3,953,917	+		Echvi_3349	0.80	-0.9
3,953,920	+		Echvi_3349	0.81	+1.0
3,953,921	-		Echvi_3349	0.81	+0.8
3,953,990	-		Echvi_3349	0.89	+0.7
3,954,012	+				-1.7
3,954,013	-				-0.9
3,954,057	-				-0.8
3,954,071	+				-0.4
3,954,078	+				+0.1
3,954,078	+				+0.9
3,954,078	+				-0.1
3,954,079	-				-0.6
3,954,079	-				-0.1
3,954,086	-				+2.9
3,954,095	-				-0.5
3,954,147	+				+0.4
3,954,148	-				-1.0
3,954,169	-				+1.1
3,954,228	-				-1.1
3,954,228	-				+1.2
3,954,233	-				-2.5
3,954,285	-		Echvi_3350	0.13	-1.0
3,954,320	-		Echvi_3350	0.15	-0.2
3,954,341	-		Echvi_3350	0.17	-1.9
3,954,341	-		Echvi_3350	0.17	+0.4
3,954,344	-		Echvi_3350	0.18	+0.2
3,954,448	-		Echvi_3350	0.26	-1.4
3,954,448	-		Echvi_3350	0.26	-1.7
3,954,472	-		Echvi_3350	0.28	-0.1
3,954,472	-		Echvi_3350	0.28	-0.7
3,954,472	-		Echvi_3350	0.28	-0.0
3,954,531	-		Echvi_3350	0.33	+1.7
3,954,630	+		Echvi_3350	0.42	+0.3
3,954,666	+		Echvi_3350	0.45	+1.6
3,954,667	-		Echvi_3350	0.45	+1.2
3,954,768	-		Echvi_3350	0.53	-0.7
3,954,912	+		Echvi_3350	0.66	-0.9
3,954,912	+		Echvi_3350	0.66	+2.4
3,954,912	+		Echvi_3350	0.66	-0.1
3,954,912	+		Echvi_3350	0.66	-0.9
3,954,913	-		Echvi_3350	0.66	-1.0
3,954,954	+		Echvi_3350	0.69	-0.5