Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3001

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
3,585,518	-		Echvi_3000	0.45	-0.4
3,585,558	+		Echvi_3000	0.48	+1.6
3,585,597	-		Echvi_3000	0.50	+0.2
3,585,632	-		Echvi_3000	0.52	+1.1
3,585,706	+		Echvi_3000	0.56	-0.7
3,585,707	-		Echvi_3000	0.56	+0.4
3,585,708	+		Echvi_3000	0.56	+0.9
3,585,708	+		Echvi_3000	0.56	+0.7
3,585,709	-		Echvi_3000	0.56	-1.5
3,585,760	+		Echvi_3000	0.59	+0.5
3,585,760	+		Echvi_3000	0.59	-0.3
3,585,761	-		Echvi_3000	0.59	-0.9
3,585,761	-		Echvi_3000	0.59	-0.4
3,585,763	-		Echvi_3000	0.59	+0.5
3,585,763	-		Echvi_3000	0.59	-0.9
3,585,828	-		Echvi_3000	0.63	+0.6
3,585,839	-		Echvi_3000	0.63	-0.1
3,585,839	-		Echvi_3000	0.63	+0.2
3,585,840	+		Echvi_3000	0.63	-0.4
3,585,840	+		Echvi_3000	0.63	-0.7
3,585,840	+		Echvi_3000	0.63	-0.4
3,585,841	-		Echvi_3000	0.63	-0.0
3,585,841	-		Echvi_3000	0.63	-0.1
3,585,908	+		Echvi_3000	0.67	+0.4
3,585,919	+		Echvi_3000	0.68	+0.9
3,585,919	+		Echvi_3000	0.68	-0.6
3,585,920	-		Echvi_3000	0.68	-0.3
3,585,920	-		Echvi_3000	0.68	-1.2
3,585,921	+		Echvi_3000	0.68	+1.7
3,585,921	+		Echvi_3000	0.68	+0.9
3,585,921	+		Echvi_3000	0.68	+1.3
3,585,921	+		Echvi_3000	0.68	+1.2
3,585,921	+		Echvi_3000	0.68	-0.9
3,585,922	-		Echvi_3000	0.68	-0.5
3,585,922	-		Echvi_3000	0.68	-0.5
3,585,922	-		Echvi_3000	0.68	+1.5
3,585,922	-		Echvi_3000	0.68	+0.8
3,585,922	-		Echvi_3000	0.68	+0.5
3,585,922	-		Echvi_3000	0.68	+0.1
3,586,126	+		Echvi_3000	0.79	+0.6
3,586,127	-		Echvi_3000	0.79	+0.1
3,586,127	-		Echvi_3000	0.79	-0.4
3,586,142	+		Echvi_3000	0.80	-1.0
3,586,181	+		Echvi_3000	0.82	-0.1
3,586,181	+		Echvi_3000	0.82	+1.1
3,586,181	+				+2.1
3,586,181	+		Echvi_3000	0.82	+0.3
3,586,182	-		Echvi_3000	0.82	-0.3
3,586,182	-		Echvi_3000	0.82	-1.7
3,586,184	+		Echvi_3000	0.83	-0.5
3,586,185	-		Echvi_3000	0.83	-1.9
3,586,205	+		Echvi_3000	0.84	+0.9
3,586,206	-		Echvi_3000	0.84	+0.8
3,586,206	-		Echvi_3000	0.84	-1.0
3,586,206	-		Echvi_3000	0.84	+0.5
3,586,207	+		Echvi_3000	0.84	+0.4
3,586,213	+		Echvi_3000	0.84	-0.1
3,586,250	+		Echvi_3000	0.86	+0.4
3,586,317	-				+0.9
3,586,349	+				-0.2
3,586,367	-				+1.6
3,586,367	-				+0.9
3,586,403	-				-0.9
3,586,442	+				-0.8
3,586,495	+				-0.3
3,586,495	+				+0.3
3,586,496	-				+1.5
3,586,496	-				-0.5
3,586,496	-				+2.4
3,586,496	-				-0.4
3,586,568	+		Echvi_3001	0.25	-0.7
3,586,583	-		Echvi_3001	0.30	-2.0
3,586,600	-		Echvi_3001	0.37	-1.8
3,586,614	-		Echvi_3001	0.42	+0.6
3,586,683	+		Echvi_3001	0.67	-1.8
3,586,684	-		Echvi_3001	0.67	-1.3
3,586,714	+		Echvi_3001	0.78	+0.1
3,586,735	-		Echvi_3001	0.86	+1.2
3,586,735	-		Echvi_3001	0.86	-1.5
3,586,735	-		Echvi_3001	0.86	-0.5
3,586,749	-				+0.5
3,586,749	-				-0.9
3,586,790	-				-0.8
3,586,790	-				-0.1
3,586,809	+				+0.3
3,586,872	+				+2.1
3,586,990	+		Echvi_3002	0.18	-0.9
3,586,996	+		Echvi_3002	0.19	-0.1
3,586,996	+		Echvi_3002	0.19	+3.1
3,586,996	+		Echvi_3002	0.19	+0.2
3,587,060	+		Echvi_3002	0.26	+1.8
3,587,066	-		Echvi_3002	0.27	+0.9
3,587,137	+		Echvi_3002	0.34	-0.9
3,587,138	-		Echvi_3002	0.34	-0.9
3,587,181	-		Echvi_3002	0.39	+0.3
3,587,248	+		Echvi_3002	0.46	+1.0
3,587,252	+		Echvi_3002	0.47	-0.3
3,587,252	+		Echvi_3002	0.47	+0.7
3,587,252	+		Echvi_3002	0.47	-0.5
3,587,253	-		Echvi_3002	0.47	+0.3
3,587,275	-		Echvi_3002	0.49	+1.1
3,587,288	-		Echvi_3002	0.51	-0.4
3,587,301	-		Echvi_3002	0.52	-0.8
3,587,397	+		Echvi_3002	0.63	+0.5
3,587,397	+		Echvi_3002	0.63	+1.1
3,587,415	+		Echvi_3002	0.65	+0.7
3,587,416	-		Echvi_3002	0.65	-1.3
3,587,416	-		Echvi_3002	0.65	-0.2
3,587,473	-		Echvi_3002	0.71	-0.3
3,587,473	-		Echvi_3002	0.71	+0.5
3,587,500	+		Echvi_3002	0.74	+1.1
3,587,504	-		Echvi_3002	0.74	-0.2
3,587,504	-		Echvi_3002	0.74	+0.2
3,587,510	-		Echvi_3002	0.75	+0.1
3,587,628	+		Echvi_3002	0.88	+0.0
3,587,629	-		Echvi_3002	0.88	+0.5
3,587,645	-		Echvi_3002	0.90	+1.0
3,587,645	-		Echvi_3002	0.90	+0.3
3,587,645	-		Echvi_3002	0.90	+1.2
3,587,650	-				-0.3
3,587,651	+				-0.1
3,587,651	+				+0.6
3,587,683	+				+2.1
3,587,684	-				-0.4
3,587,695	-				+1.1
3,587,712	-				-0.4
3,587,718	+				+0.6