Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2483

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,948,012	+				-1.2
2,948,012	+				+0.4
2,948,012	+				-0.1
2,948,012	+				+0.5
2,948,013	-				-0.1
2,948,016	+				+0.6
2,948,016	+				+0.5
2,948,017	-				+1.4
2,948,017	-				-0.2
2,948,070	-				-0.5
2,948,074	+				-1.1
2,948,113	+				+0.9
2,948,119	+				+1.1
2,948,119	+				-0.5
2,948,150	+				-0.9
2,948,151	-				+0.3
2,948,151	-				+1.5
2,948,151	-				-1.3
2,948,151	-				+1.5
2,948,164	+				+0.5
2,948,165	-				-2.3
2,948,168	+				+0.2
2,948,169	-				+0.5
2,948,172	+				-1.3
2,948,172	+				+0.1
2,948,173	-				-0.5
2,948,173	-				-1.3
2,948,173	-				+1.2
2,948,179	-				+0.6
2,948,179	-				+0.5
2,948,179	-				+0.9
2,948,195	-				-0.4
2,948,306	+		Echvi_2482	0.15	+1.2
2,948,342	+		Echvi_2482	0.23	-1.9
2,948,342	+		Echvi_2482	0.23	-1.2
2,948,343	-		Echvi_2482	0.23	-0.2
2,948,358	+		Echvi_2482	0.26	-0.8
2,948,387	-		Echvi_2482	0.33	+1.3
2,948,411	+		Echvi_2482	0.38	+3.1
2,948,411	+		Echvi_2482	0.38	-0.1
2,948,412	-		Echvi_2482	0.38	+1.1
2,948,415	-		Echvi_2482	0.39	-0.5
2,948,415	-		Echvi_2482	0.39	+1.0
2,948,500	+		Echvi_2482	0.57	-0.8
2,948,501	-		Echvi_2482	0.58	+1.5
2,948,507	-		Echvi_2482	0.59	-0.4
2,948,561	-		Echvi_2482	0.71	+0.5
2,948,581	+		Echvi_2482	0.75	-1.4
2,948,581	+		Echvi_2482	0.75	-0.7
2,948,606	-		Echvi_2482	0.80	+0.9
2,948,900	-				-1.6
2,948,910	+				-0.3
2,948,911	-				+1.6
2,948,989	+		Echvi_2483	0.11	+1.1
2,948,990	-		Echvi_2483	0.11	+0.9
2,949,025	+		Echvi_2483	0.16	+1.2
2,949,047	+		Echvi_2483	0.18	-1.5
2,949,047	+		Echvi_2483	0.18	+3.1
2,949,047	+		Echvi_2483	0.18	-0.7
2,949,047	+		Echvi_2483	0.18	+0.9
2,949,048	-		Echvi_2483	0.18	-0.1
2,949,048	-		Echvi_2483	0.18	+0.6
2,949,049	+		Echvi_2483	0.18	-1.8
2,949,049	+		Echvi_2483	0.18	+1.2
2,949,049	+		Echvi_2483	0.18	-0.3
2,949,049	+		Echvi_2483	0.18	+0.9
2,949,049	+		Echvi_2483	0.18	-0.1
2,949,049	+		Echvi_2483	0.18	-1.7
2,949,049	+		Echvi_2483	0.18	+1.5
2,949,050	-		Echvi_2483	0.19	+0.2
2,949,050	-		Echvi_2483	0.19	-0.3
2,949,050	-		Echvi_2483	0.19	-0.6
2,949,050	-		Echvi_2483	0.19	+0.4
2,949,054	-		Echvi_2483	0.19	-0.7
2,949,077	-		Echvi_2483	0.22	+0.2
2,949,131	-		Echvi_2483	0.28	-0.5
2,949,170	-		Echvi_2483	0.33	+0.8
2,949,170	-		Echvi_2483	0.33	+0.2
2,949,186	-		Echvi_2483	0.35	-0.7
2,949,366	-		Echvi_2483	0.57	-0.2
2,949,383	+		Echvi_2483	0.59	+2.1
2,949,383	+		Echvi_2483	0.59	+0.4
2,949,384	-		Echvi_2483	0.59	+1.4
2,949,384	-		Echvi_2483	0.59	-0.4
2,949,384	-		Echvi_2483	0.59	-0.2
2,949,559	+		Echvi_2483	0.81	+1.0
2,949,601	-		Echvi_2483	0.86	+2.1
2,949,658	+				-0.5
2,949,659	-				+0.2
2,949,659	-				-0.0
2,949,659	-				+1.1
2,949,659	-				+0.2
2,949,662	+				+1.3
2,949,719	+				+0.5
2,949,720	-				+1.3
2,949,771	-				-0.3
2,949,812	+				-0.0
2,949,821	+				+0.5
2,949,822	-				+0.6
2,949,822	-				-0.1
2,949,867	+				+0.8
2,949,867	+				-0.7
2,949,868	-				+0.8
2,949,868	-				-2.1
2,949,926	+				-0.3
2,949,926	+				-0.1
2,949,926	+				+0.4
2,949,926	+				-1.7
2,949,926	+				-0.7
2,949,926	+				-0.1
2,949,926	+				+0.8
2,949,927	-				-0.6
2,949,927	-				-0.2
2,949,929	+				-1.1
2,950,053	+				+2.7
2,950,054	-		Echvi_2484	0.11	+0.8
2,950,257	-		Echvi_2484	0.18	-0.8
2,950,311	+		Echvi_2484	0.20	+0.5
2,950,312	-		Echvi_2484	0.20	-0.6
2,950,317	+		Echvi_2484	0.20	+1.1
2,950,505	+		Echvi_2484	0.26	-0.5
2,950,522	+		Echvi_2484	0.27	+1.7
2,950,523	-		Echvi_2484	0.27	+0.9
2,950,540	-		Echvi_2484	0.27	-0.2
2,950,541	+		Echvi_2484	0.27	-1.3
2,950,541	+		Echvi_2484	0.27	-0.4
2,950,541	+		Echvi_2484	0.27	-0.1
2,950,542	-		Echvi_2484	0.27	-0.6
2,950,542	-		Echvi_2484	0.27	-1.5
2,950,542	-		Echvi_2484	0.27	+1.0
2,950,574	+		Echvi_2484	0.29	+1.3
2,950,574	+		Echvi_2484	0.29	+1.3
2,950,574	+		Echvi_2484	0.29	+2.1
2,950,575	-		Echvi_2484	0.29	+0.1
2,950,575	-		Echvi_2484	0.29	-2.4
2,950,700	+		Echvi_2484	0.33	+1.2
2,950,701	-		Echvi_2484	0.33	+0.0
2,950,701	-		Echvi_2484	0.33	+0.7
2,950,701	-		Echvi_2484	0.33	+1.1
2,950,701	-		Echvi_2484	0.33	-1.5
2,950,716	-		Echvi_2484	0.33	-0.2