Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2468

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,928,248	-				+0.3
2,928,248	-				-1.2
2,928,363	-		Echvi_2468	0.21	+1.0
2,928,390	-		Echvi_2468	0.24	+0.3
2,928,390	-		Echvi_2468	0.24	-0.6
2,928,494	-		Echvi_2468	0.35	+1.5
2,928,498	-		Echvi_2468	0.35	-0.2
2,928,556	-		Echvi_2468	0.41	-1.0
2,928,683	-		Echvi_2468	0.55	+1.4
2,928,958	-		Echvi_2468	0.83	+1.4
2,929,035	-				+0.3
2,929,095	-				-0.1
2,929,138	-				-0.5
2,929,156	-				-1.3
2,929,236	-				-0.3
2,929,280	+				+1.2
2,929,291	+				+2.8
2,929,292	-				-0.8
2,929,292	-				-0.7
2,929,292	-				-0.4
2,929,292	-				+1.5
2,929,292	-				+1.2
2,929,334	+				+0.5
2,929,345	+				-0.1
2,929,365	+				+2.5
2,929,368	+				+0.3
2,929,369	-				-0.4
2,929,369	-				-1.4
2,929,371	+				+0.5
2,929,371	+				+0.2
2,929,372	-				-1.1
2,929,372	-				-2.0
2,929,372	-				+0.2
2,929,372	-				+0.9
2,929,372	-				+2.1
2,929,372	-				-0.0
2,929,376	+				-1.1
2,929,377	-				-1.5
2,929,377	-				-0.9
2,929,380	+				+1.1
2,929,380	+				-0.2
2,929,380	+				+0.1
2,929,380	+				-1.0
2,929,405	-				-0.2
2,929,413	-				+1.5
2,929,418	+				+0.5
2,929,439	+				+1.6
2,929,440	+				-2.3
2,929,440	-				+0.8
2,929,442	-				+0.0
2,929,442	-				+1.1
2,929,442	-				+0.5
2,929,471	+				+0.4
2,929,565	-				-0.4
2,929,591	+				+1.6
2,929,638	+				-0.6
2,929,639	-				-0.6
2,929,639	-				-0.6
2,929,647	-				-0.3
2,929,701	-				-1.0
2,929,777	-		Echvi_2469	0.14	-0.0
2,929,780	-		Echvi_2469	0.14	+0.5
2,929,780	-		Echvi_2469	0.14	-0.5
2,929,803	+		Echvi_2469	0.18	-0.2
2,929,803	+		Echvi_2469	0.18	+0.3
2,929,803	+		Echvi_2469	0.18	+0.5
2,929,804	-		Echvi_2469	0.18	-2.3
2,929,804	-		Echvi_2469	0.18	-1.1
2,929,815	+		Echvi_2469	0.20	-0.0
2,929,816	-		Echvi_2469	0.20	+0.5
2,929,839	+		Echvi_2469	0.23	-0.8
2,929,839	+		Echvi_2469	0.23	+0.8
2,929,840	-		Echvi_2469	0.24	+1.0
2,929,840	-		Echvi_2469	0.24	-0.7
2,929,840	-		Echvi_2469	0.24	-0.7
2,929,846	+		Echvi_2469	0.25	+0.1
2,929,847	-		Echvi_2469	0.25	-1.3
2,929,876	+		Echvi_2469	0.29	+1.3
2,929,876	+		Echvi_2469	0.29	+1.8
2,929,929	+		Echvi_2469	0.38	+0.3
2,929,930	-		Echvi_2469	0.38	+1.9
2,929,937	+		Echvi_2469	0.39	+1.4
2,929,938	-		Echvi_2469	0.39	+0.0
2,929,938	-		Echvi_2469	0.39	-1.0
2,929,985	-		Echvi_2469	0.47	-0.9
2,929,985	-		Echvi_2469	0.47	-0.5
2,930,036	+		Echvi_2469	0.55	+1.1
2,930,037	-		Echvi_2469	0.55	-0.3
2,930,037	-		Echvi_2469	0.55	+0.7
2,930,069	+		Echvi_2469	0.60	+0.8
2,930,070	-		Echvi_2469	0.60	-0.9
2,930,070	-		Echvi_2469	0.60	+0.1
2,930,070	-		Echvi_2469	0.60	+0.7
2,930,107	+		Echvi_2469	0.66	-0.1
2,930,107	+		Echvi_2469	0.66	+1.7
2,930,107	+		Echvi_2469	0.66	+1.3
2,930,107	+		Echvi_2469	0.66	+1.1