Experiment: m.b. Carbenicillin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2450 and Echvi_2451 are separated by 70 nucleotides Echvi_2451 and Echvi_2452 are separated by 28 nucleotides
Echvi_2450: Echvi_2450 - methionyl-tRNA formyltransferase, at 2,909,735 to 2,910,655
_2450
Echvi_2451: Echvi_2451 - Uncharacterized protein conserved in bacteria, at 2,910,726 to 2,911,949
_2451
Echvi_2452: Echvi_2452 - ABC-type transport system, involved in lipoprotein release, permease component, at 2,911,978 to 2,913,198
_2452
Position (kb)
2910
2911
2912 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2910.670 kb on - strand at 2910.670 kb on - strand at 2910.683 kb on + strand at 2910.700 kb on - strand at 2910.919 kb on + strand, within Echvi_2451 at 2910.920 kb on - strand, within Echvi_2451 at 2910.920 kb on - strand, within Echvi_2451 at 2910.970 kb on + strand, within Echvi_2451 at 2911.029 kb on - strand, within Echvi_2451 at 2911.140 kb on + strand, within Echvi_2451 at 2911.140 kb on + strand, within Echvi_2451 at 2911.141 kb on - strand, within Echvi_2451 at 2911.260 kb on + strand, within Echvi_2451 at 2911.284 kb on - strand, within Echvi_2451 at 2911.378 kb on - strand, within Echvi_2451 at 2911.378 kb on - strand, within Echvi_2451 at 2911.378 kb on - strand, within Echvi_2451 at 2911.378 kb on - strand, within Echvi_2451 at 2911.378 kb on - strand, within Echvi_2451 at 2911.378 kb on - strand, within Echvi_2451 at 2911.378 kb on - strand, within Echvi_2451 at 2911.380 kb on - strand, within Echvi_2451 at 2911.449 kb on + strand, within Echvi_2451 at 2911.454 kb on - strand, within Echvi_2451 at 2911.471 kb on + strand, within Echvi_2451 at 2911.472 kb on - strand, within Echvi_2451 at 2911.472 kb on - strand, within Echvi_2451 at 2911.663 kb on - strand, within Echvi_2451 at 2911.731 kb on + strand, within Echvi_2451 at 2911.731 kb on + strand, within Echvi_2451 at 2911.731 kb on + strand, within Echvi_2451 at 2911.731 kb on + strand, within Echvi_2451 at 2911.732 kb on - strand, within Echvi_2451 at 2911.875 kb on - strand at 2911.912 kb on - strand at 2911.926 kb on + strand at 2911.940 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.2 mg/ml remove 2,910,670 - +1.1 2,910,670 - +0.5 2,910,683 + -2.1 2,910,700 - -0.8 2,910,919 + Echvi_2451 0.16 +2.0 2,910,920 - Echvi_2451 0.16 -0.4 2,910,920 - Echvi_2451 0.16 +1.3 2,910,970 + Echvi_2451 0.20 +2.9 2,911,029 - Echvi_2451 0.25 +0.7 2,911,140 + Echvi_2451 0.34 +1.3 2,911,140 + Echvi_2451 0.34 +2.1 2,911,141 - Echvi_2451 0.34 +0.5 2,911,260 + Echvi_2451 0.44 +0.5 2,911,284 - Echvi_2451 0.46 +0.8 2,911,378 - Echvi_2451 0.53 +0.8 2,911,378 - Echvi_2451 0.53 +0.6 2,911,378 - Echvi_2451 0.53 +0.4 2,911,378 - Echvi_2451 0.53 +2.0 2,911,378 - Echvi_2451 0.53 +1.5 2,911,378 - Echvi_2451 0.53 +2.6 2,911,378 - Echvi_2451 0.53 -0.1 2,911,380 - Echvi_2451 0.53 +0.2 2,911,449 + Echvi_2451 0.59 -0.3 2,911,454 - Echvi_2451 0.59 +0.8 2,911,471 + Echvi_2451 0.61 +3.0 2,911,472 - Echvi_2451 0.61 +1.9 2,911,472 - Echvi_2451 0.61 +2.5 2,911,663 - Echvi_2451 0.77 +1.7 2,911,731 + Echvi_2451 0.82 -0.5 2,911,731 + Echvi_2451 0.82 -0.5 2,911,731 + Echvi_2451 0.82 +0.9 2,911,731 + Echvi_2451 0.82 +0.7 2,911,732 - Echvi_2451 0.82 +0.0 2,911,875 - +0.6 2,911,912 - -0.2 2,911,926 + -0.2 2,911,940 + -0.9
Or see this region's nucleotide sequence