Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2407

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,849,124	-		Echvi_2406	0.34	-0.4
2,849,149	+		Echvi_2406	0.36	+1.3
2,849,150	-		Echvi_2406	0.36	+0.3
2,849,172	-		Echvi_2406	0.38	-0.7
2,849,172	-		Echvi_2406	0.38	+0.1
2,849,175	-		Echvi_2406	0.39	-0.5
2,849,175	-		Echvi_2406	0.39	-1.4
2,849,181	+		Echvi_2406	0.39	-0.2
2,849,181	+		Echvi_2406	0.39	+0.1
2,849,181	+		Echvi_2406	0.39	+0.5
2,849,181	+		Echvi_2406	0.39	-0.9
2,849,182	-		Echvi_2406	0.39	-0.8
2,849,220	-		Echvi_2406	0.43	+0.2
2,849,287	-		Echvi_2406	0.48	-0.7
2,849,291	-		Echvi_2406	0.49	-0.4
2,849,291	-		Echvi_2406	0.49	-1.2
2,849,334	+		Echvi_2406	0.53	-2.7
2,849,335	-		Echvi_2406	0.53	-0.7
2,849,335	-		Echvi_2406	0.53	-0.5
2,849,339	+		Echvi_2406	0.53	-0.9
2,849,340	-		Echvi_2406	0.53	-1.1
2,849,342	-		Echvi_2406	0.53	-0.0
2,849,342	-		Echvi_2406	0.53	+0.4
2,849,342	-				+2.1
2,849,343	+		Echvi_2406	0.53	-0.8
2,849,343	+		Echvi_2406	0.53	-0.3
2,849,343	+		Echvi_2406	0.53	-0.2
2,849,344	-		Echvi_2406	0.53	-0.4
2,849,344	-		Echvi_2406	0.53	-0.6
2,849,344	-		Echvi_2406	0.53	-0.9
2,849,344	-		Echvi_2406	0.53	+0.0
2,849,344	-		Echvi_2406	0.53	-0.8
2,849,400	+		Echvi_2406	0.58	-0.2
2,849,400	+		Echvi_2406	0.58	-1.2
2,849,403	-		Echvi_2406	0.59	+0.2
2,849,405	+		Echvi_2406	0.59	-0.0
2,849,467	-		Echvi_2406	0.64	-0.0
2,849,594	+		Echvi_2406	0.75	+0.3
2,849,594	+		Echvi_2406	0.75	-0.7
2,849,594	+		Echvi_2406	0.75	-1.5
2,849,595	-		Echvi_2406	0.76	-0.9
2,849,595	-		Echvi_2406	0.76	+0.5
2,849,595	-		Echvi_2406	0.76	+0.3
2,849,610	-		Echvi_2406	0.77	-0.4
2,849,636	+		Echvi_2406	0.79	-0.3
2,849,636	+		Echvi_2406	0.79	-1.6
2,849,636	+		Echvi_2406	0.79	-0.6
2,849,658	+		Echvi_2406	0.81	-2.5
2,849,672	+		Echvi_2406	0.82	+0.5
2,849,739	-		Echvi_2406	0.88	-1.6
2,849,739	-		Echvi_2406	0.88	-0.5
2,849,813	+				+1.1
2,849,870	-				-0.3
2,849,939	+				-0.5
2,849,940	-				-0.5
2,849,983	+				+1.1
2,849,984	-				-1.9
2,850,004	+				-1.0
2,850,005	-				-0.8
2,850,005	-				-0.1
2,850,005	-				+0.4
2,850,005	-				-1.8
2,850,007	+				+0.0
2,850,007	+				-0.7
2,850,007	+				-0.9
2,850,008	-				+1.2
2,850,008	-				-0.2
2,850,046	+				+1.3
2,850,098	+				-0.7
2,850,099	-				-0.8
2,850,103	+				-0.2
2,850,276	+		Echvi_2407	0.23	+1.1
2,850,276	+		Echvi_2407	0.23	+1.0
2,850,291	-		Echvi_2407	0.25	-0.3
2,850,291	-		Echvi_2407	0.25	+0.2
2,850,291	-		Echvi_2407	0.25	-0.6
2,850,293	+		Echvi_2407	0.25	-0.3
2,850,463	+		Echvi_2407	0.47	+0.9
2,850,463	+		Echvi_2407	0.47	-0.8
2,850,464	-		Echvi_2407	0.47	-0.4
2,850,546	+		Echvi_2407	0.57	-0.1
2,850,546	+		Echvi_2407	0.57	+2.9
2,850,579	-		Echvi_2407	0.62	-0.2
2,850,616	+		Echvi_2407	0.66	+1.5
2,850,616	+		Echvi_2407	0.66	-0.3
2,850,638	-		Echvi_2407	0.69	+0.1
2,850,705	+		Echvi_2407	0.78	+1.4
2,850,706	-		Echvi_2407	0.78	-0.9
2,850,738	+		Echvi_2407	0.82	+1.0
2,850,791	-		Echvi_2407	0.89	-1.9
2,850,799	+		Echvi_2407	0.90	+0.3
2,850,799	+				+0.5
2,850,799	+		Echvi_2407	0.90	+0.6
2,850,800	-		Echvi_2407	0.90	+0.9
2,850,810	-				+0.8
2,850,811	+				-2.1
2,850,811	+				+0.3
2,850,831	+				+0.9
2,850,831	+				+0.4
2,850,831	+				+2.7
2,850,832	-				-1.5
2,850,869	-				-0.2
2,850,880	-				-0.7
2,850,905	+				+0.7
2,850,906	-				+0.8
2,850,906	-				+2.1
2,850,957	-				-1.3
2,851,021	-				+0.2
2,851,032	+				-0.0
2,851,033	-				+0.5
2,851,033	-				-0.1
2,851,041	-				+0.2
2,851,065	+				-0.6
2,851,066	-				+0.2
2,851,074	-				+1.2
2,851,147	-		Echvi_2408	0.14	+0.7
2,851,171	-		Echvi_2408	0.16	-0.9
2,851,199	-		Echvi_2408	0.18	+0.1
2,851,262	+		Echvi_2408	0.24	-0.8
2,851,377	+		Echvi_2408	0.33	+0.2
2,851,398	+		Echvi_2408	0.35	-1.4
2,851,465	-		Echvi_2408	0.41	-0.7
2,851,500	+		Echvi_2408	0.44	+0.4
2,851,713	+		Echvi_2408	0.61	+0.5
2,851,838	-		Echvi_2408	0.72	+0.0
2,851,847	-		Echvi_2408	0.73	-2.0