Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2281

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,700,967	-		Echvi_2279	0.78	+0.6
2,700,967	-		Echvi_2279	0.78	+0.3
2,700,967	-		Echvi_2279	0.78	-2.2
2,700,968	+		Echvi_2279	0.78	-0.1
2,700,968	+		Echvi_2279	0.78	-1.3
2,700,968	+		Echvi_2279	0.78	-0.3
2,700,969	-		Echvi_2279	0.78	-1.0
2,700,969	-		Echvi_2279	0.78	-0.2
2,700,969	-		Echvi_2279	0.78	+1.0
2,700,969	-		Echvi_2279	0.78	+0.1
2,701,001	+		Echvi_2279	0.82	-0.1
2,701,002	-		Echvi_2279	0.82	-1.3
2,701,221	-				+1.1
2,701,225	-				-0.3
2,701,244	+				-1.1
2,701,245	-				-2.1
2,701,313	-				+0.2
2,701,365	-		Echvi_2280	0.16	-0.2
2,701,417	+		Echvi_2280	0.27	+0.1
2,701,418	-		Echvi_2280	0.28	-1.0
2,701,419	+		Echvi_2280	0.28	-1.1
2,701,420	-		Echvi_2280	0.28	-0.4
2,701,432	+		Echvi_2280	0.31	+0.1
2,701,433	-		Echvi_2280	0.31	-0.2
2,701,513	+		Echvi_2280	0.48	+0.7
2,701,514	-		Echvi_2280	0.49	+1.1
2,701,586	+		Echvi_2280	0.64	-0.0
2,701,593	+		Echvi_2280	0.66	-0.6
2,701,754	+				-0.4
2,701,755	-				+0.9
2,701,774	+				+0.1
2,701,775	-				-1.2
2,701,781	-				-0.5
2,701,781	-				-0.9
2,701,781	-				-0.9
2,701,781	-				+1.3
2,701,899	-				-0.0
2,701,937	+				-0.3
2,701,943	+				-0.6
2,701,944	-				+1.0
2,701,951	+				-0.7
2,701,951	+				-0.1
2,701,952	-				+0.1
2,702,027	+				-1.2
2,702,044	-				+0.8
2,702,107	+		Echvi_2281	0.11	+0.1
2,702,107	+		Echvi_2281	0.11	+0.1
2,702,107	+		Echvi_2281	0.11	+1.6
2,702,108	-		Echvi_2281	0.11	-0.2
2,702,108	-		Echvi_2281	0.11	+0.6
2,702,108	-		Echvi_2281	0.11	-0.2
2,702,108	-		Echvi_2281	0.11	+0.0
2,702,111	+		Echvi_2281	0.11	+0.1
2,702,148	-		Echvi_2281	0.14	-1.4
2,702,436	+		Echvi_2281	0.33	+0.3
2,702,436	+		Echvi_2281	0.33	-0.2
2,702,557	+		Echvi_2281	0.42	+0.1
2,702,558	-		Echvi_2281	0.42	+0.4
2,702,558	-		Echvi_2281	0.42	+0.1
2,702,630	+		Echvi_2281	0.47	+1.3
2,702,631	-		Echvi_2281	0.47	+1.4
2,702,660	+		Echvi_2281	0.49	-0.0
2,702,665	+		Echvi_2281	0.49	+0.6
2,702,717	+		Echvi_2281	0.52	-0.3
2,702,718	-		Echvi_2281	0.53	-0.1
2,702,720	-		Echvi_2281	0.53	+0.8
2,702,720	-		Echvi_2281	0.53	+1.4
2,702,772	-		Echvi_2281	0.56	-0.9
2,702,829	+		Echvi_2281	0.60	+0.1
2,702,829	+		Echvi_2281	0.60	-1.9
2,702,830	-		Echvi_2281	0.60	-0.5
2,702,957	+		Echvi_2281	0.69	+1.0
2,702,957	+		Echvi_2281	0.69	+0.1
2,702,958	-		Echvi_2281	0.69	+0.6
2,702,958	-		Echvi_2281	0.69	-0.9
2,702,969	-		Echvi_2281	0.70	+1.7
2,702,972	+		Echvi_2281	0.70	-0.6
2,702,973	-		Echvi_2281	0.70	-0.6
2,702,998	+		Echvi_2281	0.72	-1.0
2,703,121	+		Echvi_2281	0.80	+0.7
2,703,122	-		Echvi_2281	0.80	-0.1
2,703,183	+		Echvi_2281	0.84	+1.7
2,703,183	+		Echvi_2281	0.84	+1.4
2,703,183	+		Echvi_2281	0.84	-0.5
2,703,184	-		Echvi_2281	0.84	+0.6
2,703,184	-		Echvi_2281	0.84	+2.0
2,703,214	+		Echvi_2281	0.87	-0.1
2,703,215	-		Echvi_2281	0.87	+0.4
2,703,310	-				-0.8
2,703,310	-				-0.2
2,703,418	-				-0.5
2,703,706	+				+0.3
2,703,707	-				+0.5
2,703,707	-				-0.8
2,703,708	+				-0.6
2,703,710	+				-1.4
2,703,712	+				+0.3
2,703,865	+				+0.9
2,703,865	+				-0.4
2,703,880	-		Echvi_2282	0.11	+0.7
2,703,957	-		Echvi_2282	0.16	-0.9
2,704,034	+		Echvi_2282	0.20	+1.7
2,704,035	-		Echvi_2282	0.21	-0.4
2,704,036	+		Echvi_2282	0.21	-1.1
2,704,037	-		Echvi_2282	0.21	-1.9
2,704,037	-		Echvi_2282	0.21	-0.5
2,704,060	+		Echvi_2282	0.22	+1.1
2,704,104	+		Echvi_2282	0.25	-1.2
2,704,105	-		Echvi_2282	0.25	+0.6
2,704,123	-		Echvi_2282	0.26	-0.3
2,704,123	-		Echvi_2282	0.26	-2.8
2,704,126	-		Echvi_2282	0.26	+1.7
2,704,198	+		Echvi_2282	0.31	+0.6
2,704,208	+		Echvi_2282	0.32	+0.9
2,704,208	+		Echvi_2282	0.32	-0.8
2,704,208	+		Echvi_2282	0.32	-0.5
2,704,296	-		Echvi_2282	0.37	+2.0
2,704,303	+		Echvi_2282	0.38	-1.5
2,704,304	-		Echvi_2282	0.38	-0.2
2,704,307	+		Echvi_2282	0.38	-1.5
2,704,398	+		Echvi_2282	0.44	+0.8