Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2139

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,526,731	+		Echvi_2138	0.58	-0.1
2,526,750	+		Echvi_2138	0.60	-1.0
2,526,808	-		Echvi_2138	0.64	+0.1
2,526,908	+		Echvi_2138	0.71	-0.2
2,526,951	+		Echvi_2138	0.74	+0.3
2,526,994	+		Echvi_2138	0.77	-0.7
2,526,995	-		Echvi_2138	0.77	+0.5
2,527,234	-				+0.2
2,527,240	-				+0.3
2,527,240	-				-1.1
2,527,248	+				+0.7
2,527,313	-				-0.7
2,527,313	-				-2.0
2,527,322	+				+0.9
2,527,342	+				+0.3
2,527,437	+				-0.1
2,527,930	-		Echvi_2139	0.34	-0.6
2,527,930	-		Echvi_2139	0.34	-1.7
2,528,007	+		Echvi_2139	0.47	-1.4
2,528,115	+		Echvi_2139	0.65	-0.8
2,528,166	+		Echvi_2139	0.73	-0.9
2,528,166	+		Echvi_2139	0.73	+1.1
2,528,166	+		Echvi_2139	0.73	-1.0
2,528,166	+		Echvi_2139	0.73	-0.9
2,528,242	-		Echvi_2139	0.86	-0.6
2,528,274	+				-0.8
2,528,333	+				-1.2
2,528,334	-				+0.2
2,528,450	-				+0.5
2,528,454	-				-1.0
2,528,454	-				-1.8
2,528,454	-				-1.8
2,528,456	-				-0.5
2,528,456	-				+1.9
2,528,458	-				-0.7
2,528,458	-				-0.7
2,528,458	-				-1.3
2,528,460	-				+1.0
2,528,460	-				-0.8
2,528,475	+				+0.2
2,528,475	+				-1.3
2,528,475	+				-0.8
2,528,477	+				-0.1
2,528,552	-				-1.1
2,528,709	+		Echvi_2140	0.22	+0.3
2,528,710	-				-0.7
2,528,741	-		Echvi_2140	0.25	-2.0
2,528,779	+		Echvi_2140	0.29	-0.0
2,528,779	+		Echvi_2140	0.29	-0.4
2,528,788	-		Echvi_2140	0.30	-1.4
2,528,812	+		Echvi_2140	0.32	+0.1
2,528,813	-		Echvi_2140	0.32	+0.3
2,528,842	+		Echvi_2140	0.35	-0.1
2,528,846	-		Echvi_2140	0.35	-1.0
2,528,846	-		Echvi_2140	0.35	+0.1
2,528,872	-		Echvi_2140	0.38	-0.9
2,528,954	+		Echvi_2140	0.45	+0.7
2,528,977	-		Echvi_2140	0.48	+1.8
2,528,977	-		Echvi_2140	0.48	+0.3
2,528,977	-		Echvi_2140	0.48	+1.1
2,528,996	-		Echvi_2140	0.49	-0.7
2,528,996	-		Echvi_2140	0.49	+1.0
2,529,033	-		Echvi_2140	0.53	+0.2
2,529,043	-		Echvi_2140	0.54	+0.4
2,529,096	+		Echvi_2140	0.59	-1.5
2,529,096	+		Echvi_2140	0.59	+0.9
2,529,097	-		Echvi_2140	0.59	+0.3
2,529,177	+		Echvi_2140	0.67	+1.4
2,529,177	+		Echvi_2140	0.67	+1.9
2,529,177	+		Echvi_2140	0.67	+0.0
2,529,177	+		Echvi_2140	0.67	+0.3
2,529,178	-		Echvi_2140	0.67	-3.0
2,529,178	-		Echvi_2140	0.67	-1.8
2,529,178	-		Echvi_2140	0.67	+0.1
2,529,264	-				+2.1
2,529,265	+		Echvi_2140	0.75	+1.4
2,529,265	+		Echvi_2140	0.75	-1.2
2,529,266	-		Echvi_2140	0.75	+0.3
2,529,266	-		Echvi_2140	0.75	-0.4
2,529,277	-		Echvi_2140	0.76	+0.3