Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2133

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,519,114	+		Echvi_2132	0.51	-1.3
2,519,115	-		Echvi_2132	0.51	-0.6
2,519,115	-		Echvi_2132	0.51	-1.3
2,519,118	+		Echvi_2132	0.52	+0.3
2,519,118	+		Echvi_2132	0.52	-1.2
2,519,118	+		Echvi_2132	0.52	-0.0
2,519,119	-		Echvi_2132	0.52	-1.5
2,519,119	-		Echvi_2132	0.52	+0.6
2,519,238	-		Echvi_2132	0.59	-0.5
2,519,257	+		Echvi_2132	0.60	-2.7
2,519,297	+		Echvi_2132	0.62	-0.2
2,519,318	+		Echvi_2132	0.64	-1.6
2,519,319	-		Echvi_2132	0.64	-0.1
2,519,319	-		Echvi_2132	0.64	-0.9
2,519,349	+		Echvi_2132	0.66	-0.9
2,519,349	+		Echvi_2132	0.66	+0.7
2,519,433	+		Echvi_2132	0.71	+1.8
2,519,433	+		Echvi_2132	0.71	+2.1
2,519,467	-		Echvi_2132	0.73	-0.3
2,519,533	-		Echvi_2132	0.77	-2.2
2,519,534	+		Echvi_2132	0.77	-1.0
2,519,535	-		Echvi_2132	0.77	-0.9
2,519,610	+		Echvi_2132	0.81	+2.7
2,519,610	+		Echvi_2132	0.81	-1.4
2,519,610	+		Echvi_2132	0.81	-0.3
2,519,610	+		Echvi_2132	0.81	-0.3
2,519,610	+		Echvi_2132	0.81	+0.2
2,519,610	+		Echvi_2132	0.81	-1.6
2,519,610	+		Echvi_2132	0.81	-1.6
2,519,611	-		Echvi_2132	0.81	+1.1
2,519,611	-		Echvi_2132	0.81	-0.7
2,519,611	-		Echvi_2132	0.81	+0.3
2,519,653	+		Echvi_2132	0.84	+0.4
2,519,653	+				+1.1
2,519,785	+				-0.5
2,519,785	+				-1.5
2,519,786	-				-0.5
2,519,810	-				-0.5
2,519,813	-				-0.3
2,519,818	+				-2.0
2,519,819	-				+3.7
2,519,821	-				-1.0
2,519,874	+				-1.1
2,519,874	+				+0.5
2,519,874	+				-0.4
2,519,874	+				-1.1
2,519,875	-				-1.3
2,519,875	-				-1.2
2,519,875	-				-0.7
2,519,875	-				-2.3
2,519,875	-				+0.4
2,519,875	-				-1.5
2,519,893	+				-0.9
2,519,929	-				-0.0
2,519,952	+				+0.7
2,519,989	-				-0.2
2,520,015	-				-1.4
2,520,015	-				-0.3
2,520,015	-				-0.3
2,520,084	-				-1.0
2,520,088	+				+0.7
2,520,252	-		Echvi_2133	0.15	-0.5
2,520,252	-		Echvi_2133	0.15	-1.0
2,520,255	+		Echvi_2133	0.15	-1.3
2,520,255	+		Echvi_2133	0.15	+0.6
2,520,255	+		Echvi_2133	0.15	+0.1
2,520,255	+		Echvi_2133	0.15	+0.0
2,520,255	+		Echvi_2133	0.15	-0.5
2,520,256	-		Echvi_2133	0.15	-1.8
2,520,373	+				+1.1
2,520,373	+		Echvi_2133	0.23	+1.8
2,520,373	+		Echvi_2133	0.23	+0.5
2,520,534	+		Echvi_2133	0.33	+1.1
2,520,534	+		Echvi_2133	0.33	-0.2
2,520,535	-		Echvi_2133	0.33	-0.1
2,520,568	+		Echvi_2133	0.35	-0.1
2,520,607	-		Echvi_2133	0.37	-0.3
2,520,659	+		Echvi_2133	0.40	-0.1
2,520,660	-		Echvi_2133	0.40	-0.5
2,520,667	+		Echvi_2133	0.41	+0.3
2,520,668	-		Echvi_2133	0.41	+0.1
2,520,675	-		Echvi_2133	0.41	+0.4
2,520,675	-		Echvi_2133	0.41	+0.2
2,520,715	+		Echvi_2133	0.44	-0.8
2,520,718	-		Echvi_2133	0.44	-0.0
2,520,819	-		Echvi_2133	0.50	-0.3
2,520,819	-		Echvi_2133	0.50	-0.2
2,520,822	-		Echvi_2133	0.51	-0.6
2,520,914	-		Echvi_2133	0.56	-0.1
2,520,928	-		Echvi_2133	0.57	-0.1
2,520,931	-		Echvi_2133	0.57	+0.4
2,520,931	-		Echvi_2133	0.57	-1.3
2,520,931	-		Echvi_2133	0.57	-0.8
2,520,940	-		Echvi_2133	0.58	+0.3
2,520,993	+		Echvi_2133	0.61	+0.3
2,520,993	+		Echvi_2133	0.61	-1.0
2,520,994	-		Echvi_2133	0.61	-0.2
2,520,996	+		Echvi_2133	0.61	+1.3
2,520,997	-		Echvi_2133	0.61	+0.3
2,521,029	+		Echvi_2133	0.63	+0.5
2,521,030	-		Echvi_2133	0.63	+0.7
2,521,107	-		Echvi_2133	0.68	+0.2
2,521,114	-		Echvi_2133	0.69	-0.5
2,521,176	-		Echvi_2133	0.73	-0.2
2,521,284	+		Echvi_2133	0.79	-0.3
2,521,285	-		Echvi_2133	0.79	+0.0
2,521,285	-		Echvi_2133	0.79	-1.3
2,521,285	-		Echvi_2133	0.79	-0.2
2,521,285	-		Echvi_2133	0.79	-0.5
2,521,287	-		Echvi_2133	0.79	-0.5
2,521,287	-		Echvi_2133	0.79	-0.7
2,521,293	+		Echvi_2133	0.80	+0.5
2,521,293	+		Echvi_2133	0.80	+0.5
2,521,293	+		Echvi_2133	0.80	-0.1
2,521,503	+				-0.2
2,521,503	+				+3.1
2,521,504	-				-0.6
2,521,534	+				-0.8
2,521,541	-				-0.5
2,521,552	+				+0.4
2,521,552	+				+1.3
2,521,553	-				-1.0
2,521,553	-				+1.1
2,521,555	-				-0.7
2,521,631	+				+1.1
2,521,631	+				-0.5
2,521,635	+				-0.6
2,521,635	+				+1.4
2,521,636	-				-0.5
2,521,655	-				+0.3
2,521,661	+				+0.8
2,521,677	+				+0.7
2,521,678	-				+1.3
2,521,678	-				-0.7
2,521,699	+				-0.7
2,521,700	-				-0.0
2,521,700	-				-0.1
2,521,744	-		Echvi_2134	0.15	-0.2
2,521,795	-		Echvi_2134	0.23	+0.3
2,521,822	-		Echvi_2134	0.26	+1.5
2,521,903	-		Echvi_2134	0.38	+1.3
2,521,957	+		Echvi_2134	0.45	+1.6
2,521,958	-		Echvi_2134	0.45	+2.1
2,521,960	-		Echvi_2134	0.46	+0.5
2,521,960	-		Echvi_2134	0.46	-0.1
2,521,960	-		Echvi_2134	0.46	-0.6
2,522,070	-		Echvi_2134	0.61	-1.7
2,522,347	+				+0.8
2,522,348	-				+0.5
2,522,348	-				+0.3
2,522,368	+				+0.2
2,522,368	+				+0.3
2,522,369	-				+1.8
2,522,383	+				+0.7
2,522,384	-				+2.1
2,522,385	+				+1.1
2,522,397	+				-0.4
2,522,410	+				+0.4
2,522,424	+				+0.4
2,522,469	+				+0.2
2,522,473	+				-1.5
2,522,530	+				+0.4