Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2037

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,399,554	+				-2.3
2,399,602	+				-0.5
2,399,602	+				-0.7
2,399,603	-				+0.2
2,399,611	-				-1.8
2,399,617	+				-0.2
2,399,617	+				-0.9
2,399,625	-				+1.4
2,399,625	-				-0.6
2,399,634	+				+1.5
2,399,641	+				+0.9
2,399,642	-				+0.7
2,399,642	-				-0.5
2,399,672	-				+0.1
2,399,675	-				-1.1
2,399,695	+				-0.2
2,399,696	-				+0.7
2,399,725	-				-0.2
2,399,755	+				-1.4
2,399,755	+				-1.3
2,399,783	+				-0.7
2,399,783	+				-0.5
2,399,783	+				-2.0
2,399,823	+		Echvi_2036	0.12	-0.6
2,399,823	+		Echvi_2036	0.12	-1.0
2,399,824	-		Echvi_2036	0.12	-1.0
2,399,824	-		Echvi_2036	0.12	-2.0
2,399,895	+		Echvi_2036	0.21	-0.0
2,399,942	+		Echvi_2036	0.27	-0.5
2,399,943	-		Echvi_2036	0.27	-0.2
2,399,943	-		Echvi_2036	0.27	-0.7
2,399,963	+		Echvi_2036	0.29	+0.1
2,400,076	+		Echvi_2036	0.44	-1.9
2,400,076	+		Echvi_2036	0.44	-1.0
2,400,149	-		Echvi_2036	0.53	-0.6
2,400,174	-		Echvi_2036	0.56	-0.0
2,400,273	+		Echvi_2036	0.69	-0.3
2,400,273	+		Echvi_2036	0.69	-2.1
2,400,303	+		Echvi_2036	0.72	-1.2
2,400,304	-		Echvi_2036	0.73	-1.3
2,400,304	-		Echvi_2036	0.73	-1.8
2,400,325	+		Echvi_2036	0.75	+0.6
2,400,326	-		Echvi_2036	0.75	-0.3
2,400,326	-		Echvi_2036	0.75	-0.8
2,400,347	+		Echvi_2036	0.78	+1.1
2,400,348	-		Echvi_2036	0.78	-1.2
2,400,356	+		Echvi_2036	0.79	-1.6
2,400,371	+		Echvi_2036	0.81	-2.2
2,400,372	-		Echvi_2036	0.81	-0.3
2,400,375	-		Echvi_2036	0.82	+0.7
2,400,395	+		Echvi_2036	0.84	-1.8
2,400,395	+		Echvi_2036	0.84	+0.0
2,400,396	-		Echvi_2036	0.84	-0.9
2,400,416	+		Echvi_2036	0.87	-2.5
2,400,443	-				+1.4
2,400,447	+				+1.4
2,400,459	-				-0.1
2,400,459	-				+0.3
2,400,465	+				-0.7
2,400,468	+				-0.1
2,400,474	-				-1.4
2,400,488	-				+0.1
2,400,495	-				+0.2
2,400,616	+				-0.1
2,400,617	-				-0.4
2,400,641	-				-1.2
2,400,641	-				+0.0
2,400,655	-				-0.6
2,400,788	-		Echvi_2037	0.14	-0.2
2,400,830	-		Echvi_2037	0.16	-0.3
2,400,832	+		Echvi_2037	0.16	-1.3
2,400,832	+		Echvi_2037	0.16	-0.5
2,400,832	+		Echvi_2037	0.16	-2.7
2,400,833	-		Echvi_2037	0.16	-0.9
2,400,833	-		Echvi_2037	0.16	-0.5
2,400,893	-				+2.9
2,400,893	-		Echvi_2037	0.20	-0.2
2,400,915	-		Echvi_2037	0.21	-2.5
2,400,947	-		Echvi_2037	0.23	-1.0
2,400,947	-		Echvi_2037	0.23	-0.7
2,400,949	-		Echvi_2037	0.23	-0.0
2,401,069	+		Echvi_2037	0.30	-0.7
2,401,078	-		Echvi_2037	0.30	-0.5
2,401,078	-		Echvi_2037	0.30	-0.0
2,401,087	+		Echvi_2037	0.31	-2.4
2,401,087	+		Echvi_2037	0.31	+0.5
2,401,087	+		Echvi_2037	0.31	-0.7
2,401,088	-		Echvi_2037	0.31	-1.3
2,401,107	-		Echvi_2037	0.32	+0.1
2,401,107	-		Echvi_2037	0.32	-1.1
2,401,107	-		Echvi_2037	0.32	-0.3
2,401,124	-		Echvi_2037	0.33	-0.8
2,401,124	-		Echvi_2037	0.33	+1.3
2,401,144	-		Echvi_2037	0.34	+3.1
2,401,228	-		Echvi_2037	0.38	-0.8
2,401,266	-		Echvi_2037	0.41	+2.1
2,401,292	-		Echvi_2037	0.42	-0.4
2,401,294	-		Echvi_2037	0.42	+1.1
2,401,339	-		Echvi_2037	0.45	-1.6
2,401,391	-		Echvi_2037	0.48	-1.7
2,401,393	-		Echvi_2037	0.48	-0.9
2,401,421	+		Echvi_2037	0.49	+0.1
2,401,422	-		Echvi_2037	0.49	+0.6
2,401,527	-		Echvi_2037	0.55	-0.8
2,401,528	+		Echvi_2037	0.55	-0.5
2,401,592	-		Echvi_2037	0.59	-2.7
2,401,593	+		Echvi_2037	0.59	-1.6
2,401,593	+		Echvi_2037	0.59	-1.7
2,401,593	+		Echvi_2037	0.59	-0.5
2,401,644	+		Echvi_2037	0.62	-1.0
2,401,687	+		Echvi_2037	0.64	-1.2
2,401,688	-		Echvi_2037	0.64	-0.6
2,401,688	-		Echvi_2037	0.64	+0.4
2,401,762	-		Echvi_2037	0.68	-0.1
2,401,828	+		Echvi_2037	0.72	+2.7
2,401,828	+		Echvi_2037	0.72	-2.4
2,401,829	-		Echvi_2037	0.72	-0.8
2,401,831	+		Echvi_2037	0.72	-0.2
2,401,832	-		Echvi_2037	0.72	+0.2
2,401,848	-		Echvi_2037	0.73	-1.3
2,401,850	-		Echvi_2037	0.73	-0.7
2,401,851	+		Echvi_2037	0.73	-0.7
2,401,900	-		Echvi_2037	0.76	-0.4
2,401,946	+		Echvi_2037	0.79	-0.7
2,401,947	-		Echvi_2037	0.79	-0.5
2,401,952	-		Echvi_2037	0.79	-1.0
2,401,978	+		Echvi_2037	0.81	-1.0
2,401,981	-		Echvi_2037	0.81	-1.2
2,402,149	+				-0.9
2,402,150	-				-0.3
2,402,150	-				+0.6
2,402,150	-				+0.4
2,402,151	+				+0.6
2,402,152	-				+0.3
2,402,255	-				-0.7
2,402,256	+				+1.5
2,402,256	+				+0.1
2,402,257	-				-0.9
2,402,257	-				+0.9
2,402,257	-				+2.1
2,402,368	+				-2.0
2,402,524	-				-0.3
2,402,563	+				-2.3
2,402,564	-				-1.1
2,402,665	-				+2.1
2,402,665	-				+0.1
2,402,683	-				+0.6
2,402,683	-				-0.1
2,402,683	-				-0.6
2,402,689	+				+0.6
2,402,693	+				+1.5
2,402,759	+				-1.2
2,402,760	-				-0.2
2,402,760	-				+0.4
2,402,761	+				+0.6
2,402,761	+				+0.8
2,402,761	+				+1.1
2,402,762	-				+1.2
2,402,785	+				+0.6
2,402,786	-				-2.6
2,402,786	-				+0.1
2,402,788	+				+1.3
2,402,878	+				+0.9
2,402,879	-				-0.1
2,402,879	-				+1.4
2,402,947	+				-0.7
2,402,948	-				-1.0
2,402,948	-				+0.0
2,402,964	+				+0.0
2,402,998	+		Echvi_2038	0.10	-0.9
2,403,025	+		Echvi_2038	0.11	-1.2
2,403,025	+		Echvi_2038	0.11	+0.1
2,403,026	-		Echvi_2038	0.11	-0.8
2,403,302	+		Echvi_2038	0.20	-0.6
2,403,303	-		Echvi_2038	0.20	-0.1
2,403,303	-		Echvi_2038	0.20	+1.3
2,403,304	+		Echvi_2038	0.20	-0.1
2,403,304	+		Echvi_2038	0.20	+1.8
2,403,304	+		Echvi_2038	0.20	+1.1
2,403,305	-		Echvi_2038	0.21	-0.6
2,403,305	-		Echvi_2038	0.21	+0.5