Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1939

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,282,044	+				-0.2
2,282,045	-				+0.5
2,282,051	+				-0.5
2,282,058	+				+0.5
2,282,065	+				+0.4
2,282,068	+				+1.0
2,282,075	+				+0.1
2,282,076	-				+2.1
2,282,095	+				+1.6
2,282,095	+				+0.2
2,282,108	+				-0.6
2,282,108	+				+0.4
2,282,109	-				+1.1
2,282,192	+				-0.8
2,282,404	+		Echvi_1938	0.22	-0.3
2,282,406	+		Echvi_1938	0.22	+0.5
2,282,407	-		Echvi_1938	0.23	-0.5
2,282,407	-		Echvi_1938	0.23	+0.4
2,282,407	-		Echvi_1938	0.23	-0.5
2,282,407	-		Echvi_1938	0.23	-0.5
2,282,488	-		Echvi_1938	0.33	+0.1
2,282,488	-		Echvi_1938	0.33	+0.0
2,282,569	-		Echvi_1938	0.44	+0.5
2,282,569	-		Echvi_1938	0.44	+0.2
2,282,580	+		Echvi_1938	0.45	-1.2
2,282,580	+		Echvi_1938	0.45	+0.0
2,282,646	+		Echvi_1938	0.54	+0.2
2,282,646	+		Echvi_1938	0.54	-0.9
2,282,647	-		Echvi_1938	0.54	+0.1
2,282,677	+		Echvi_1938	0.58	-0.6
2,282,678	-		Echvi_1938	0.58	-0.1
2,282,678	-		Echvi_1938	0.58	-1.8
2,282,679	+		Echvi_1938	0.58	+0.3
2,282,739	+		Echvi_1938	0.66	-0.0
2,282,740	-		Echvi_1938	0.66	+0.9
2,282,776	+		Echvi_1938	0.71	-0.1
2,282,955	+				-1.1
2,282,956	-				+0.7
2,282,956	-				+0.2
2,282,998	+				+1.6
2,282,999	-				+2.7
2,283,002	+				+0.2
2,283,003	-				+0.7
2,283,021	+				-1.6
2,283,129	+		Echvi_1939	0.15	-0.1
2,283,175	+		Echvi_1939	0.21	+1.4
2,283,202	-		Echvi_1939	0.24	+0.1
2,283,373	+		Echvi_1939	0.44	+0.0
2,283,421	+		Echvi_1939	0.50	+0.5
2,283,422	-		Echvi_1939	0.50	+2.7
2,283,650	+		Echvi_1939	0.77	-0.2
2,283,721	+		Echvi_1939	0.85	+0.6
2,283,721	+		Echvi_1939	0.85	+0.5
2,283,817	+				+0.8
2,283,826	+				+0.1
2,283,826	+				+0.4
2,283,827	-				+1.6
2,283,827	-				+0.8
2,283,830	+				-0.3
2,283,830	+				-0.2
2,284,108	+		Echvi_1940	0.20	+0.1
2,284,108	+		Echvi_1940	0.20	-0.9
2,284,156	+		Echvi_1940	0.24	-0.0
2,284,168	+		Echvi_1940	0.25	-1.1
2,284,195	-		Echvi_1940	0.27	+0.0
2,284,201	+		Echvi_1940	0.28	+0.3
2,284,389	+		Echvi_1940	0.43	-1.3
2,284,390	-		Echvi_1940	0.43	+1.2
2,284,519	+		Echvi_1940	0.53	+2.1
2,284,519	+		Echvi_1940	0.53	-1.4
2,284,520	-		Echvi_1940	0.53	-0.3