Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1876

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,201,934	+		Echvi_1875	0.41	+0.7
2,201,991	-		Echvi_1875	0.45	+0.4
2,202,011	+		Echvi_1875	0.46	+0.4
2,202,011	+		Echvi_1875	0.46	+0.1
2,202,044	-		Echvi_1875	0.48	-0.7
2,202,161	-		Echvi_1875	0.56	+0.3
2,202,204	+		Echvi_1875	0.59	+0.4
2,202,205	-		Echvi_1875	0.59	+1.0
2,202,441	+		Echvi_1875	0.75	+0.1
2,202,442	-		Echvi_1875	0.75	-0.2
2,202,510	+		Echvi_1875	0.79	+0.8
2,202,511	-		Echvi_1875	0.79	+0.1
2,202,567	+		Echvi_1875	0.83	+0.2
2,202,567	+		Echvi_1875	0.83	+2.6
2,202,567	+		Echvi_1875	0.83	-0.0
2,202,568	-		Echvi_1875	0.83	+0.7
2,202,576	+		Echvi_1875	0.84	+1.5
2,202,768	+				-0.2
2,202,768	+				+1.6
2,202,801	-				+0.8
2,202,841	-				+0.7
2,202,851	+				+0.9
2,202,852	-				-0.8
2,202,852	-				+1.7
2,202,896	+				+0.1
2,202,905	-				+1.1
2,202,915	+				+1.2
2,202,915	+				+0.4
2,202,915	+				+0.3
2,202,915	+				+0.0
2,202,916	-				+0.4
2,202,920	-				-0.7
2,202,927	+				-1.9
2,202,927	+				+0.6
2,202,929	+				+0.3
2,202,929	+				-0.2
2,202,930	-				+0.3
2,202,930	-				-1.0
2,202,958	+				-0.1
2,203,008	-				-0.7
2,203,008	-				-0.2
2,203,031	-				-0.2
2,203,178	+		Echvi_1876	0.19	-0.0
2,203,224	+		Echvi_1876	0.22	+4.3
2,203,225	-		Echvi_1876	0.22	-0.4
2,203,225	-		Echvi_1876	0.22	+1.1
2,203,225	-		Echvi_1876	0.22	+0.4
2,203,227	+		Echvi_1876	0.22	-0.0
2,203,228	-		Echvi_1876	0.22	-0.8
2,203,308	+		Echvi_1876	0.29	-0.3
2,203,309	-		Echvi_1876	0.29	-0.2
2,203,327	+		Echvi_1876	0.30	+0.4
2,203,366	+		Echvi_1876	0.33	-0.2
2,203,366	+		Echvi_1876	0.33	+0.7
2,203,367	-		Echvi_1876	0.33	+1.7
2,203,367	-		Echvi_1876	0.33	-2.2
2,203,385	+		Echvi_1876	0.34	-0.9
2,203,386	-		Echvi_1876	0.34	-1.0
2,203,515	+		Echvi_1876	0.44	+0.4
2,203,515	+		Echvi_1876	0.44	+0.3
2,203,516	-		Echvi_1876	0.44	+0.1
2,203,610	+		Echvi_1876	0.52	+0.9
2,203,663	-		Echvi_1876	0.56	+0.1
2,203,668	+		Echvi_1876	0.56	-0.9
2,203,669	-		Echvi_1876	0.56	+0.3
2,203,766	+		Echvi_1876	0.63	+0.8
2,203,766	+		Echvi_1876	0.63	+0.5
2,203,817	+		Echvi_1876	0.67	+2.6
2,203,857	-		Echvi_1876	0.70	+0.3
2,204,012	+		Echvi_1876	0.82	+1.4
2,204,012	+		Echvi_1876	0.82	+0.2
2,204,013	-		Echvi_1876	0.82	+1.3
2,204,158	+				+1.7
2,204,158	+				-0.4
2,204,158	+				-1.3
2,204,217	+				+0.6
2,204,217	+				-0.7
2,204,229	-				-1.1
2,204,229	-				-0.1
2,204,239	-				-1.3
2,204,239	-				+0.3
2,204,239	-				+0.0
2,204,240	+				+0.8
2,204,241	-				+0.1
2,204,281	+				-0.4
2,204,282	-				-0.4
2,204,337	+				-1.3
2,204,338	-				-0.1
2,204,390	-		Echvi_1877	0.30	+1.4
2,204,460	+				+0.6
2,204,489	-				+1.3
2,204,518	-				+1.0
2,204,611	+		Echvi_1878	0.13	-1.0
2,204,612	-		Echvi_1878	0.13	+0.3
2,204,612	-		Echvi_1878	0.13	+0.4
2,204,615	-		Echvi_1878	0.13	+0.6
2,204,651	-		Echvi_1878	0.16	-0.9
2,204,651	-		Echvi_1878	0.16	-0.7
2,204,666	+		Echvi_1878	0.18	+0.3
2,204,667	-		Echvi_1878	0.18	-0.2
2,204,682	-		Echvi_1878	0.19	-0.7
2,204,702	+		Echvi_1878	0.21	-0.7
2,204,709	+		Echvi_1878	0.22	+0.1
2,204,709	+		Echvi_1878	0.22	+0.8
2,204,728	-		Echvi_1878	0.23	+1.0
2,204,733	-		Echvi_1878	0.24	+0.9
2,204,741	+		Echvi_1878	0.24	-0.3
2,204,741	+		Echvi_1878	0.24	-1.2
2,204,741	+		Echvi_1878	0.24	-0.1
2,204,742	-		Echvi_1878	0.24	-0.4
2,204,742	-		Echvi_1878	0.24	+0.1
2,204,742	-		Echvi_1878	0.24	-0.0
2,204,742	-		Echvi_1878	0.24	+0.6
2,204,742	-		Echvi_1878	0.24	-0.1
2,204,745	-		Echvi_1878	0.25	+0.3
2,204,764	+		Echvi_1878	0.26	+1.1
2,204,764	+		Echvi_1878	0.26	-0.9
2,204,765	-		Echvi_1878	0.26	-1.3
2,204,765	-		Echvi_1878	0.26	-1.2
2,204,808	+		Echvi_1878	0.30	+2.1
2,204,811	+		Echvi_1878	0.31	+0.5
2,204,812	-		Echvi_1878	0.31	+0.3
2,204,812	-		Echvi_1878	0.31	-2.1
2,204,812	-		Echvi_1878	0.31	+2.5
2,204,830	+		Echvi_1878	0.32	+1.0
2,204,831	-		Echvi_1878	0.32	+0.4
2,205,016	-		Echvi_1878	0.49	+0.8
2,205,017	+		Echvi_1878	0.49	+0.1
2,205,176	+		Echvi_1878	0.63	+0.3
2,205,176	+		Echvi_1878	0.63	+2.4
2,205,177	-		Echvi_1878	0.63	+1.4
2,205,177	-		Echvi_1878	0.63	+0.5
2,205,177	-		Echvi_1878	0.63	-0.7
2,205,177	-		Echvi_1878	0.63	+1.6
2,205,242	-		Echvi_1878	0.69	-0.2