Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1864

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,184,348	+		Echvi_1863	0.59	+0.3
2,184,349	-		Echvi_1863	0.59	-1.0
2,184,349	-		Echvi_1863	0.59	-2.0
2,184,462	+		Echvi_1863	0.64	+1.4
2,184,464	+		Echvi_1863	0.64	+0.6
2,184,465	-		Echvi_1863	0.64	-0.7
2,184,465	-		Echvi_1863	0.64	-0.9
2,184,477	+		Echvi_1863	0.65	-0.3
2,184,522	+		Echvi_1863	0.67	+1.6
2,184,533	+		Echvi_1863	0.67	-1.1
2,184,533	+		Echvi_1863	0.67	-0.7
2,184,534	-		Echvi_1863	0.67	-0.4
2,184,534	-		Echvi_1863	0.67	-2.6
2,184,551	+				+1.6
2,184,551	+		Echvi_1863	0.68	+0.4
2,184,604	-		Echvi_1863	0.71	-0.7
2,184,612	+		Echvi_1863	0.71	-0.1
2,184,613	-				+0.1
2,184,613	-		Echvi_1863	0.71	-0.2
2,184,655	+		Echvi_1863	0.73	+0.4
2,184,655	+		Echvi_1863	0.73	+0.1
2,184,656	-		Echvi_1863	0.73	-1.4
2,184,681	-		Echvi_1863	0.74	-0.4
2,184,816	-		Echvi_1863	0.80	-0.1
2,184,816	-		Echvi_1863	0.80	+0.8
2,184,853	+		Echvi_1863	0.82	+1.8
2,184,939	-		Echvi_1863	0.86	-0.0
2,184,939	-		Echvi_1863	0.86	-0.3
2,184,939	-		Echvi_1863	0.86	+2.1
2,185,048	+				-1.0
2,185,156	+				-0.2
2,185,156	+				+0.6
2,185,159	-				+1.5
2,185,199	+				+0.6
2,185,200	-				+1.0
2,185,200	-				-0.7
2,185,242	+				+0.9
2,185,242	+				-0.5
2,185,244	+				-0.7
2,185,244	+				-2.0
2,185,244	+				-0.0
2,185,245	-				+0.3
2,185,245	-				+0.5
2,185,245	-				-0.5
2,185,245	-				-0.2
2,185,400	+		Echvi_1864	0.12	-1.9
2,185,400	+		Echvi_1864	0.12	-0.7
2,185,400	+		Echvi_1864	0.12	+0.8
2,185,400	+		Echvi_1864	0.12	-1.4
2,185,475	-		Echvi_1864	0.20	+0.1
2,185,488	-				+3.7
2,185,527	-		Echvi_1864	0.25	+0.3
2,185,606	+		Echvi_1864	0.32	-0.2
2,185,689	-		Echvi_1864	0.40	-0.9
2,185,696	-		Echvi_1864	0.41	+1.1
2,185,696	-		Echvi_1864	0.41	-1.4
2,185,696	-		Echvi_1864	0.41	-1.6
2,185,699	+		Echvi_1864	0.41	+0.6
2,185,699	+		Echvi_1864	0.41	+0.1
2,185,699	+		Echvi_1864	0.41	-0.9
2,185,699	+		Echvi_1864	0.41	-0.7
2,185,699	+		Echvi_1864	0.41	+2.6
2,185,699	+		Echvi_1864	0.41	-1.6
2,185,699	+		Echvi_1864	0.41	+0.6
2,185,699	+		Echvi_1864	0.41	-0.7
2,185,699	+		Echvi_1864	0.41	+1.1
2,185,700	-		Echvi_1864	0.41	-0.9
2,185,700	-		Echvi_1864	0.41	-3.0
2,185,700	-		Echvi_1864	0.41	+0.6
2,185,700	-		Echvi_1864	0.41	-1.0
2,185,700	-		Echvi_1864	0.41	-1.2
2,185,700	-		Echvi_1864	0.41	-0.2
2,185,700	-		Echvi_1864	0.41	-1.0
2,185,700	-		Echvi_1864	0.41	+0.7
2,185,700	-		Echvi_1864	0.41	+0.4
2,185,700	-		Echvi_1864	0.41	-0.7
2,185,700	-		Echvi_1864	0.41	-0.2
2,185,700	-		Echvi_1864	0.41	+1.7
2,185,700	-		Echvi_1864	0.41	-2.8
2,185,700	-		Echvi_1864	0.41	-2.2
2,185,702	-		Echvi_1864	0.42	-2.0
2,185,702	-		Echvi_1864	0.42	-0.5
2,185,710	-		Echvi_1864	0.42	-0.0
2,185,725	-		Echvi_1864	0.44	-0.8
2,185,745	+		Echvi_1864	0.46	-1.4
2,185,921	+		Echvi_1864	0.63	+1.7
2,185,922	-		Echvi_1864	0.63	-2.2
2,185,943	+		Echvi_1864	0.65	-0.5
2,186,029	+		Echvi_1864	0.73	-0.2
2,186,030	-		Echvi_1864	0.73	-1.3
2,186,032	-		Echvi_1864	0.73	-1.1
2,186,032	-		Echvi_1864	0.73	-0.9
2,186,251	+				+0.5
2,186,251	+				-0.9
2,186,251	+				-0.5
2,186,252	-				+0.3
2,186,252	-				-1.1
2,186,254	+				-0.1
2,186,254	+				+0.4
2,186,255	-				+1.0
2,186,255	-				-0.0
2,186,261	+				-0.7
2,186,261	+				-1.2
2,186,362	+				-0.9
2,186,363	-				-0.6
2,186,373	+				-1.1
2,186,373	+				+2.1
2,186,396	-		Echvi_1865	0.16	-1.7
2,186,445	+		Echvi_1865	0.43	+0.9
2,186,509	-		Echvi_1865	0.78	-0.4
2,186,591	-				+0.0
2,186,591	-				-0.9
2,186,592	+				+0.6
2,186,593	-				+0.5
2,186,593	-				+0.7
2,186,653	+				-1.4
2,186,654	-				-1.0
2,186,654	-				-2.3
2,186,662	-				-0.6
2,186,662	-				-1.8
2,186,667	-				+0.2
2,186,729	+				-0.9
2,186,732	+				-2.5
2,186,732	+				-1.9
2,186,736	+				+0.3
2,186,739	-				-0.8
2,186,739	-				+0.2
2,186,751	+				+0.3
2,186,844	+				-1.6
2,186,856	+				+0.1
2,186,856	+				+0.7
2,186,870	+				+0.1
2,186,897	+				+1.3
2,186,944	+				-0.9
2,186,944	+				+0.8
2,186,972	+				+1.4
2,186,973	-				-0.8
2,186,973	-				-0.1
2,187,013	-				-1.6
2,187,061	-				+0.6
2,187,061	-				-1.0
2,187,144	+				-0.4
2,187,144	+				+0.1
2,187,168	-				+0.6
2,187,168	-				+0.1
2,187,168	-				-1.0
2,187,169	+				-1.1
2,187,170	-				+0.2
2,187,170	-				-1.3
2,187,170	-				-0.4
2,187,170	-				-2.3
2,187,170	-				-0.8
2,187,170	-				+0.4
2,187,172	+				+1.5
2,187,172	+				-0.4
2,187,173	-				+0.6
2,187,173	-				+0.2
2,187,173	-				-0.4
2,187,219	-				-0.1
2,187,307	-		Echvi_1866	0.12	+0.6