Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1820

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,136,550	+		Echvi_1818	0.85	-0.2
2,136,616	+				+0.1
2,136,684	-				+0.9
2,136,688	+				-1.2
2,136,689	-				+1.1
2,136,689	-				-0.3
2,136,713	-				+0.4
2,136,797	-		Echvi_1819	0.13	-0.9
2,136,797	-		Echvi_1819	0.13	-0.1
2,136,973	-		Echvi_1819	0.35	+0.0
2,136,973	-		Echvi_1819	0.35	-0.4
2,136,976	+		Echvi_1819	0.36	+1.4
2,136,977	-		Echvi_1819	0.36	-0.8
2,137,008	+		Echvi_1819	0.40	-1.8
2,137,008	+		Echvi_1819	0.40	-0.9
2,137,008	+		Echvi_1819	0.40	-0.9
2,137,008	+		Echvi_1819	0.40	-1.6
2,137,008	+		Echvi_1819	0.40	+2.1
2,137,009	-		Echvi_1819	0.40	+0.2
2,137,009	-		Echvi_1819	0.40	-0.5
2,137,019	-		Echvi_1819	0.41	-0.2
2,137,087	-		Echvi_1819	0.50	+3.1
2,137,121	+		Echvi_1819	0.54	-1.2
2,137,122	-		Echvi_1819	0.54	-0.2
2,137,166	+		Echvi_1819	0.60	-2.5
2,137,167	-		Echvi_1819	0.60	+0.2
2,137,171	-		Echvi_1819	0.61	-0.8
2,137,171	-		Echvi_1819	0.61	-0.8
2,137,171	-		Echvi_1819	0.61	+0.4
2,137,178	+		Echvi_1819	0.62	-0.0
2,137,179	-		Echvi_1819	0.62	-1.8
2,137,265	+		Echvi_1819	0.73	+1.1
2,137,266	-		Echvi_1819	0.73	-0.3
2,137,444	+				-0.5
2,137,445	-				-0.1
2,137,445	-				+0.7
2,137,463	+				+0.7
2,137,493	+				+1.4
2,137,493	+				-0.3
2,137,493	+				+0.2
2,137,503	+				+0.8
2,137,594	-		Echvi_1820	0.15	-0.5
2,137,594	-		Echvi_1820	0.15	-1.1
2,137,721	+		Echvi_1820	0.32	-0.7
2,137,721	+		Echvi_1820	0.32	-0.6
2,137,722	-		Echvi_1820	0.32	-0.8
2,137,784	+		Echvi_1820	0.40	+0.8
2,137,784	+		Echvi_1820	0.40	-0.1
2,137,831	-		Echvi_1820	0.47	-1.5
2,137,840	-		Echvi_1820	0.48	-0.7
2,137,840	-		Echvi_1820	0.48	-1.1
2,137,840	-		Echvi_1820	0.48	-0.3
2,137,889	+		Echvi_1820	0.54	+0.3
2,137,890	-		Echvi_1820	0.54	+0.0
2,137,890	-		Echvi_1820	0.54	-0.5
2,137,891	+		Echvi_1820	0.55	-0.2
2,137,892	-		Echvi_1820	0.55	-0.9
2,137,903	+		Echvi_1820	0.56	-0.8
2,138,020	+		Echvi_1820	0.72	-1.8
2,138,076	-		Echvi_1820	0.79	-1.2
2,138,076	-		Echvi_1820	0.79	+1.7
2,138,076	-		Echvi_1820	0.79	+0.2
2,138,103	+		Echvi_1820	0.82	+1.9
2,138,104	-		Echvi_1820	0.83	+1.5
2,138,104	-		Echvi_1820	0.83	-0.9
2,138,149	+		Echvi_1820	0.89	+0.4
2,138,149	+		Echvi_1820	0.89	-0.8
2,138,149	+		Echvi_1820	0.89	-0.8
2,138,149	+		Echvi_1820	0.89	-0.8
2,138,149	+		Echvi_1820	0.89	-0.1
2,138,150	-		Echvi_1820	0.89	-0.3
2,138,150	-		Echvi_1820	0.89	+1.1
2,138,150	-		Echvi_1820	0.89	+1.1
2,138,150	-		Echvi_1820	0.89	-0.5
2,138,154	+		Echvi_1820	0.89	+1.2
2,138,155	-		Echvi_1820	0.89	+0.3
2,138,155	-		Echvi_1820	0.89	+1.3
2,138,155	-		Echvi_1820	0.89	+0.6
2,138,176	+				-0.8
2,138,177	-				-1.1
2,138,229	+				+0.8
2,138,230	-				-0.7
2,138,235	+				+0.5
2,138,236	-				+2.1
2,138,242	-				+0.1
2,138,263	+				-0.6
2,138,264	-				-0.2
2,138,281	-				-0.5
2,138,328	+				+0.9
2,138,338	+				-0.3
2,138,338	+				-1.6
2,138,339	-				+1.1
2,138,415	-				-0.8
2,138,495	+				-0.2
2,138,495	+				+0.5
2,138,537	+				+0.9
2,138,543	-				+2.1
2,138,543	-				-1.1
2,138,596	+				+0.9
2,138,628	+				+1.2
2,138,629	-				-0.2
2,138,701	+				+1.1
2,138,728	+				+0.5
2,138,743	-				-0.2
2,138,766	-				-0.3
2,138,818	+				+0.6
2,138,819	-				-0.6
2,138,874	-				+2.1
2,138,882	+				+0.8
2,138,883	-				-0.6
2,138,934	-				-0.2
2,138,934	-				+0.2
2,138,934	-				+0.1
2,138,934	-				-0.4
2,138,967	+				+1.2
2,138,968	-				-1.7
2,138,992	+				+0.9
2,138,992	+				+2.4
2,138,993	-				+0.1
2,138,993	-				+0.1
2,138,997	-				-1.3
2,139,008	+				+1.9
2,139,079	+				-0.2
2,139,080	-				+0.3
2,139,090	+				-0.8
2,139,102	-				+0.3
2,139,128	+				+3.7
2,139,181	+		Echvi_1821	0.12	+5.6
2,139,182	-		Echvi_1821	0.12	+3.9
2,139,182	-		Echvi_1821	0.12	+3.1
2,139,207	-		Echvi_1821	0.15	+2.0