Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1718

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
2,026,421	-		Echvi_1717	0.55	+0.7
2,026,452	+		Echvi_1717	0.58	+0.6
2,026,485	+		Echvi_1717	0.61	+0.6
2,026,632	-		Echvi_1717	0.73	+0.4
2,026,636	-		Echvi_1717	0.73	-0.0
2,026,732	+		Echvi_1717	0.81	-1.2
2,026,732	+		Echvi_1717	0.81	+2.3
2,026,735	+		Echvi_1717	0.82	+0.9
2,026,738	-		Echvi_1717	0.82	-1.3
2,026,742	+		Echvi_1717	0.82	+0.3
2,026,786	+		Echvi_1717	0.86	-0.4
2,026,786	+		Echvi_1717	0.86	+0.6
2,026,786	+		Echvi_1717	0.86	+1.7
2,026,786	+				+0.6
2,026,787	-		Echvi_1717	0.86	+0.6
2,026,787	-		Echvi_1717	0.86	+0.6
2,026,788	+		Echvi_1717	0.86	+1.3
2,026,788	+		Echvi_1717	0.86	-0.7
2,026,788	+		Echvi_1717	0.86	+0.9
2,026,788	+		Echvi_1717	0.86	-0.9
2,026,788	+		Echvi_1717	0.86	+0.9
2,026,788	+		Echvi_1717	0.86	-0.7
2,026,789	-		Echvi_1717	0.86	-2.0
2,026,789	-		Echvi_1717	0.86	-0.5
2,026,789	-		Echvi_1717	0.86	-1.3
2,026,789	-		Echvi_1717	0.86	-0.9
2,026,833	-				+0.3
2,026,875	+				-0.4
2,026,875	+				-0.3
2,026,875	+				-0.2
2,026,875	+				+0.6
2,026,876	-				+0.0
2,026,879	+				-0.7
2,026,908	-				-0.7
2,026,919	-				-0.4
2,026,920	+				-1.3
2,026,920	+				-0.8
2,026,921	-				-0.9
2,026,921	-				-0.6
2,026,931	-				-1.3
2,026,948	+				+0.9
2,026,949	-				+1.1
2,026,949	-				-0.4
2,027,048	-				-1.2
2,027,049	+				-0.3
2,027,049	+				+0.1
2,027,049	+				+1.8
2,027,061	-				-1.8
2,027,064	+				-0.6
2,027,083	+				-0.0
2,027,089	+				-1.0
2,027,089	+				+0.6
2,027,090	-				-1.6
2,027,090	-				-1.3
2,027,090	-				-0.9
2,027,092	-				-0.8
2,027,103	+				+0.4
2,027,104	-				-1.3
2,027,260	-				+3.1
2,027,260	-				+0.9
2,027,266	-				-0.1
2,027,266	-				-0.5
2,027,302	+				+0.2
2,027,337	+				+0.6
2,027,366	+				-0.2
2,027,366	+				-0.6
2,027,367	-				-0.1
2,027,371	-				-1.7
2,027,376	-				-0.8
2,027,376	-				-2.6
2,027,410	-				-1.1
2,027,557	-		Echvi_1718	0.33	+0.3
2,027,571	+		Echvi_1718	0.35	+1.7
2,027,611	+		Echvi_1718	0.42	+0.2
2,027,612	-		Echvi_1718	0.42	+0.8
2,027,618	+		Echvi_1718	0.43	+0.9
2,027,618	+		Echvi_1718	0.43	+0.2
2,027,618	+		Echvi_1718	0.43	+0.8
2,027,742	-		Echvi_1718	0.63	+0.6
2,027,803	+		Echvi_1718	0.73	+1.1
2,027,803	+		Echvi_1718	0.73	+0.6
2,027,804	-		Echvi_1718	0.73	-0.2
2,027,891	+		Echvi_1718	0.88	+1.7
2,027,892	-		Echvi_1718	0.88	-0.1
2,027,900	+		Echvi_1718	0.89	-0.4
2,027,901	-		Echvi_1718	0.89	-0.8
2,027,963	-				-1.4
2,027,976	+				+0.6
2,027,980	+				-0.0
2,027,981	-				+0.1
2,028,004	-				+0.4
2,028,004	-				+0.6
2,028,004	-				-0.7
2,028,082	+				-0.7
2,028,083	-				-1.2
2,028,083	-				+0.1
2,028,093	+				+1.8
2,028,122	-				-0.9
2,028,146	-				-0.4
2,028,206	+		Echvi_1719	0.26	-0.7
2,028,225	-		Echvi_1719	0.39	-1.1
2,028,327	-				+0.4
2,028,327	-				+0.3
2,028,351	-				-0.3
2,028,366	+				-0.3
2,028,379	+				-0.4
2,028,405	-				-1.4
2,028,420	+				-0.9
2,028,421	-				+0.4
2,028,453	-				-0.4
2,028,500	+				-1.0
2,028,500	+				+0.7
2,028,500	+				-1.1
2,028,501	-				-0.0
2,028,501	-				-0.4
2,028,501	-				+0.4
2,028,548	-				-0.9
2,028,573	+				-0.4
2,028,574	-				+0.0
2,028,642	-				+0.1
2,028,714	-				-0.9