Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1647

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
1,906,196	+		Echvi_1645	0.88	+0.1
1,906,196	+		Echvi_1645	0.88	-1.3
1,906,196	+		Echvi_1645	0.88	+2.4
1,906,196	+		Echvi_1645	0.88	+0.5
1,906,197	-		Echvi_1645	0.88	-1.5
1,906,197	-				+3.1
1,906,197	-		Echvi_1645	0.88	-0.8
1,906,197	-		Echvi_1645	0.88	+0.1
1,906,229	+		Echvi_1645	0.89	-1.9
1,906,229	+		Echvi_1645	0.89	-0.9
1,906,277	+				-0.9
1,906,310	-				+1.7
1,906,408	+				+1.2
1,906,408	+				-1.0
1,906,409	-				+0.1
1,906,466	+				+0.4
1,906,466	+				+0.5
1,906,467	-				+1.8
1,906,467	-				+0.0
1,906,477	-				+0.1
1,906,488	-				-0.0
1,906,488	-				-0.6
1,906,606	+				-0.4
1,906,606	+				+0.5
1,906,606	+				+0.4
1,906,606	+				+0.3
1,906,606	+				-1.0
1,906,607	-				+1.4
1,906,607	-				-1.0
1,906,607	-				+0.5
1,906,607	-				-0.2
1,906,609	-				-0.3
1,906,682	-				+0.8
1,906,690	+				-0.0
1,906,691	-				+2.5
1,906,708	-				-0.1
1,906,721	+				-0.2
1,906,745	-				-0.7
1,906,745	-				-1.1
1,906,805	+		Echvi_1646	0.24	-0.7
1,906,817	+		Echvi_1646	0.27	-0.4
1,906,824	+		Echvi_1646	0.28	-0.9
1,906,832	-		Echvi_1646	0.30	-0.4
1,906,837	+		Echvi_1646	0.31	+0.8
1,906,838	-		Echvi_1646	0.32	-2.2
1,906,842	+		Echvi_1646	0.33	-0.3
1,906,843	-		Echvi_1646	0.33	-0.3
1,906,843	-		Echvi_1646	0.33	-0.9
1,906,848	-		Echvi_1646	0.34	-1.2
1,906,926	-		Echvi_1646	0.53	+0.0
1,907,102	+				+0.9
1,907,104	+				+1.4
1,907,107	+				+0.6
1,907,163	-				-2.5
1,907,163	-				-1.2
1,907,183	+				-0.9
1,907,193	+				-0.1
1,907,234	-				-0.5
1,907,255	-				-0.2
1,907,311	+				+0.9
1,907,317	+				+0.3
1,907,371	+		Echvi_1647	0.13	-0.2
1,907,371	+		Echvi_1647	0.13	+0.5
1,907,371	+		Echvi_1647	0.13	-0.2
1,907,402	+		Echvi_1647	0.16	-1.0
1,907,421	-		Echvi_1647	0.17	-0.1
1,907,422	+		Echvi_1647	0.17	-0.0
1,907,423	-		Echvi_1647	0.17	-0.5
1,907,528	+		Echvi_1647	0.24	+0.1
1,907,551	+		Echvi_1647	0.26	+0.9
1,907,552	-		Echvi_1647	0.26	-0.4
1,907,552	-		Echvi_1647	0.26	+0.5
1,907,552	-		Echvi_1647	0.26	+0.2
1,907,573	+		Echvi_1647	0.27	+0.6
1,907,573	+		Echvi_1647	0.27	+0.6
1,907,573	+		Echvi_1647	0.27	-1.1
1,907,574	-		Echvi_1647	0.27	-1.3
1,907,599	+		Echvi_1647	0.29	-0.9
1,907,600	-		Echvi_1647	0.29	-0.0
1,907,626	+		Echvi_1647	0.31	+1.8
1,907,626	+		Echvi_1647	0.31	+0.3
1,907,626	+		Echvi_1647	0.31	+2.1
1,907,626	+		Echvi_1647	0.31	+0.5
1,907,627	-		Echvi_1647	0.31	-0.1
1,907,627	-		Echvi_1647	0.31	-0.1
1,907,627	-		Echvi_1647	0.31	-0.6
1,907,627	-		Echvi_1647	0.31	+0.7
1,907,630	+		Echvi_1647	0.31	+2.7
1,907,630	+		Echvi_1647	0.31	+0.7
1,907,630	+		Echvi_1647	0.31	+0.6
1,907,630	+		Echvi_1647	0.31	+0.2
1,907,631	-		Echvi_1647	0.31	+0.9
1,907,661	+		Echvi_1647	0.33	-1.1
1,907,668	+		Echvi_1647	0.33	-0.3
1,907,669	-		Echvi_1647	0.33	+0.5
1,907,718	+		Echvi_1647	0.37	-0.3
1,907,738	+		Echvi_1647	0.38	+1.1
1,907,741	-		Echvi_1647	0.38	+1.7
1,907,741	-		Echvi_1647	0.38	-1.1
1,907,741	-		Echvi_1647	0.38	-0.1
1,907,766	+		Echvi_1647	0.40	-1.1
1,907,774	-		Echvi_1647	0.41	+1.3
1,907,779	+		Echvi_1647	0.41	-1.1
1,907,779	+		Echvi_1647	0.41	-0.3
1,907,794	+		Echvi_1647	0.42	+0.0
1,907,794	+		Echvi_1647	0.42	+0.6
1,907,794	+		Echvi_1647	0.42	+0.0
1,907,877	-		Echvi_1647	0.47	-0.5
1,907,877	-		Echvi_1647	0.47	+2.1
1,907,877	-		Echvi_1647	0.47	+1.7
1,907,879	-		Echvi_1647	0.48	-0.1
1,907,879	-		Echvi_1647	0.48	+0.4
1,907,879	-		Echvi_1647	0.48	+0.8
1,907,914	-		Echvi_1647	0.50	+0.4
1,907,914	-		Echvi_1647	0.50	-0.6
1,907,983	+		Echvi_1647	0.55	+0.2
1,908,040	+		Echvi_1647	0.58	+0.9
1,908,041	-		Echvi_1647	0.58	-0.1
1,908,041	-		Echvi_1647	0.58	-1.2
1,908,045	+		Echvi_1647	0.59	-1.1
1,908,046	-		Echvi_1647	0.59	-0.1
1,908,046	-		Echvi_1647	0.59	+1.4
1,908,054	-		Echvi_1647	0.59	+1.1
1,908,054	-		Echvi_1647	0.59	+0.3
1,908,054	-		Echvi_1647	0.59	+0.6
1,908,054	-		Echvi_1647	0.59	-1.0
1,908,054	-		Echvi_1647	0.59	-0.5
1,908,057	-		Echvi_1647	0.60	+1.9
1,908,058	+		Echvi_1647	0.60	+0.3
1,908,070	-		Echvi_1647	0.60	+1.4
1,908,134	-		Echvi_1647	0.65	+0.9
1,908,205	+		Echvi_1647	0.69	-1.1
1,908,205	+		Echvi_1647	0.69	-0.1
1,908,253	+		Echvi_1647	0.73	+1.1
1,908,254	-		Echvi_1647	0.73	+0.9
1,908,274	+		Echvi_1647	0.74	+0.2
1,908,399	-		Echvi_1647	0.83	-1.4
1,908,424	+		Echvi_1647	0.84	+0.2
1,908,424	+		Echvi_1647	0.84	+1.3
1,908,425	-		Echvi_1647	0.84	-0.6
1,908,482	+		Echvi_1647	0.88	+0.5
1,908,482	+		Echvi_1647	0.88	-1.3
1,908,482	+		Echvi_1647	0.88	-0.2
1,908,482	+		Echvi_1647	0.88	+0.8
1,908,483	-		Echvi_1647	0.88	-0.3
1,908,483	-		Echvi_1647	0.88	-0.5
1,908,505	-		Echvi_1647	0.90	+1.9
1,908,513	-				+0.1
1,908,551	+				+0.8
1,908,552	-				+1.0
1,908,656	+				-2.2
1,908,686	-				+0.7
1,908,727	+				+2.1
1,908,728	-				+1.1
1,908,728	-				+0.0
1,908,728	-				+0.1
1,908,761	+				-1.3
1,908,761	+				-2.1
1,908,762	-				-2.2
1,908,762	-				-0.5
1,908,762	-				-2.1
1,908,764	-				+0.4
1,908,778	+				-1.2
1,908,779	-				-1.1
1,908,779	-				-0.5
1,908,817	-		Echvi_1648	0.16	+0.5
1,908,841	+		Echvi_1648	0.31	-1.3
1,908,889	+		Echvi_1648	0.62	-2.2
1,908,897	+		Echvi_1648	0.67	+2.1
1,908,897	+		Echvi_1648	0.67	+0.7
1,908,898	-		Echvi_1648	0.67	-0.9
1,908,898	-				+1.1
1,908,966	-				-0.4
1,909,010	-				+3.9
1,909,010	-				+0.6
1,909,022	-				-0.0
1,909,053	-				+0.1
1,909,064	-				-0.7
1,909,067	-				+1.5
1,909,072	-				+0.5
1,909,075	-				+0.4
1,909,189	+				+1.0
1,909,262	+				-0.4
1,909,498	+				-0.3
1,909,583	+				-0.9
1,909,583	+				-0.4
1,909,583	+				-0.4
1,909,584	-				+0.0
1,909,586	+				+0.5
1,909,586	+				+1.2
1,909,586	+				-0.0
1,909,587	-				+0.3
1,909,587	-				+0.1