Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1455

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
1,668,105	+				+1.2
1,668,111	+				-0.1
1,668,193	-				+0.9
1,668,193	-				-0.8
1,668,251	+				-0.9
1,668,252	-				-0.6
1,668,301	+				+2.2
1,668,301	+				+0.2
1,668,301	+				+0.9
1,668,302	-				-0.3
1,668,319	-				+0.3
1,668,347	+				+2.2
1,668,349	+				+0.8
1,668,349	+				+1.1
1,668,350	-				+0.2
1,668,388	+				+0.1
1,668,415	+				+0.9
1,668,416	-				+1.2
1,668,437	+				-0.6
1,668,437	+				+0.0
1,668,437	+				-0.2
1,668,456	+				-1.1
1,668,456	+				+0.6
1,668,457	-				-0.9
1,668,475	+				+0.1
1,668,475	+				+0.5
1,668,567	-				+0.4
1,668,567	-				-0.9
1,668,567	-				+0.1
1,668,654	-				-0.5
1,668,659	+				+0.1
1,668,712	-				-0.1
1,668,839	-				+0.6
1,668,861	+				+1.2
1,668,921	+				-0.9
1,668,921	+				+0.9
1,668,933	+				+0.4
1,668,981	-				+0.1
1,669,036	-				+0.8
1,669,040	+				-1.1
1,669,081	+				+0.2
1,669,081	+				-1.2
1,669,082	-				+0.0
1,669,082	-				+0.6
1,669,087	+				+0.2
1,669,087	+				+0.3
1,669,088	-				-0.9
1,669,123	+				-1.8
1,669,128	+				-0.0
1,669,176	-		Echvi_1455	0.14	+1.2
1,669,203	+		Echvi_1455	0.17	+1.1
1,669,204	-		Echvi_1455	0.17	+1.4
1,669,205	+		Echvi_1455	0.17	-0.1
1,669,205	+		Echvi_1455	0.17	-0.6
1,669,205	+		Echvi_1455	0.17	+1.1
1,669,264	+		Echvi_1455	0.24	-1.1
1,669,264	+		Echvi_1455	0.24	+0.2
1,669,289	+		Echvi_1455	0.27	-0.5
1,669,290	-		Echvi_1455	0.27	+0.1
1,669,360	-		Echvi_1455	0.36	+0.2
1,669,377	+		Echvi_1455	0.38	-0.2
1,669,377	+		Echvi_1455	0.38	-0.3
1,669,377	+		Echvi_1455	0.38	-0.5
1,669,378	-		Echvi_1455	0.38	-0.1
1,669,379	+		Echvi_1455	0.38	-0.3
1,669,379	+		Echvi_1455	0.38	-0.5
1,669,379	+		Echvi_1455	0.38	+2.5
1,669,379	+		Echvi_1455	0.38	+0.5
1,669,379	+		Echvi_1455	0.38	+0.9
1,669,380	-		Echvi_1455	0.38	-0.3
1,669,380	-		Echvi_1455	0.38	-0.6
1,669,380	-		Echvi_1455	0.38	+0.0
1,669,639	+		Echvi_1455	0.69	-1.2
1,669,670	+		Echvi_1455	0.73	+0.8
1,669,670	+		Echvi_1455	0.73	+0.5
1,669,670	+		Echvi_1455	0.73	-0.1
1,669,678	-		Echvi_1455	0.74	+1.9
1,669,678	-		Echvi_1455	0.74	+1.7
1,669,679	+		Echvi_1455	0.74	+2.4
1,669,679	+		Echvi_1455	0.74	+1.2
1,669,775	-		Echvi_1455	0.85	+0.4
1,669,784	-		Echvi_1455	0.86	+1.8
1,669,790	-		Echvi_1455	0.87	-1.2
1,669,794	+		Echvi_1455	0.88	-0.2
1,669,794	+		Echvi_1455	0.88	+0.4
1,669,795	-		Echvi_1455	0.88	-0.5
1,669,831	-				+1.2
1,669,896	+				+0.2
1,669,907	+				-0.3
1,670,064	-				+2.2
1,670,097	+				+0.2
1,670,426	-		Echvi_1456	0.31	-0.4
1,670,439	-		Echvi_1456	0.32	-0.3
1,670,474	-		Echvi_1456	0.35	+0.1
1,670,503	+		Echvi_1456	0.37	-0.9
1,670,504	-		Echvi_1456	0.37	-0.8
1,670,547	+		Echvi_1456	0.41	-0.8
1,670,548	-		Echvi_1456	0.41	+0.7
1,670,622	-		Echvi_1456	0.47	-0.3
1,670,650	-		Echvi_1456	0.49	-1.6
1,670,691	-		Echvi_1456	0.53	-2.6
1,670,779	+		Echvi_1456	0.60	-0.2
1,670,814	+		Echvi_1456	0.63	-0.6
1,670,879	-		Echvi_1456	0.68	-1.7