Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1322

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
1,526,896	+		Echvi_1321	0.46	-0.2
1,526,896	+		Echvi_1321	0.46	+0.4
1,526,917	-		Echvi_1321	0.48	-1.0
1,526,917	-		Echvi_1321	0.48	-0.6
1,526,998	+		Echvi_1321	0.56	+0.7
1,527,017	+		Echvi_1321	0.58	+1.6
1,527,017	+		Echvi_1321	0.58	+0.6
1,527,017	+		Echvi_1321	0.58	+0.1
1,527,063	-		Echvi_1321	0.62	+1.8
1,527,076	-		Echvi_1321	0.63	+0.2
1,527,181	+		Echvi_1321	0.73	-1.9
1,527,182	-		Echvi_1321	0.73	+0.4
1,527,212	+		Echvi_1321	0.76	-1.5
1,527,213	-		Echvi_1321	0.76	-0.4
1,527,245	-		Echvi_1321	0.79	+0.5
1,527,245	-				+1.7
1,527,255	+		Echvi_1321	0.80	-1.0
1,527,255	+		Echvi_1321	0.80	+0.4
1,527,256	-		Echvi_1321	0.80	+1.6
1,527,309	+		Echvi_1321	0.85	+1.2
1,527,336	+		Echvi_1321	0.87	-0.1
1,527,336	+		Echvi_1321	0.87	+0.0
1,527,372	-				-1.0
1,527,408	+				+0.4
1,527,409	-				+1.3
1,527,433	+				-0.2
1,527,434	-				-3.3
1,527,471	+				+4.2
1,527,472	-				+0.7
1,527,472	-				+0.7
1,527,486	-				+0.5
1,527,486	-				+1.9
1,527,488	+				+0.0
1,527,488	+				-0.0
1,527,488	+				+0.3
1,527,489	-				+1.2
1,527,489	-				+0.8
1,527,491	+				-0.1
1,527,491	+				-1.1
1,527,492	-				-0.1
1,527,492	-				-1.6
1,527,532	+				-0.5
1,527,576	-				-0.2
1,527,644	+				-2.7
1,527,675	+				-0.6
1,527,692	-				+0.1
1,527,703	+				-1.5
1,527,703	+				-1.2
1,527,704	-				-1.3
1,527,707	+				-0.1
1,527,708	-				+0.4
1,527,743	+				-0.1
1,527,743	+				-0.7
1,527,744	-				+0.0
1,527,746	-				-2.0
1,527,751	-				-1.1
1,527,771	-				-2.3
1,527,814	+				+1.1
1,527,814	+				-1.6
1,527,814	+				-2.5
1,527,865	+				-0.4
1,527,865	+				-0.0
1,527,865	+				-1.1
1,527,876	-				+1.4
1,527,891	-				-0.1
1,527,891	-				-0.1
1,527,947	-		Echvi_1322	0.15	-0.4
1,527,999	-		Echvi_1322	0.24	+0.3
1,528,047	+		Echvi_1322	0.33	-0.9
1,528,047	+		Echvi_1322	0.33	-0.7
1,528,047	+		Echvi_1322	0.33	-0.3
1,528,048	-		Echvi_1322	0.33	+0.2
1,528,059	+		Echvi_1322	0.35	+0.7
1,528,059	+		Echvi_1322	0.35	-2.6
1,528,060	-		Echvi_1322	0.35	+0.4
1,528,060	-		Echvi_1322	0.35	+0.4
1,528,061	+		Echvi_1322	0.35	+1.0
1,528,238	+		Echvi_1322	0.66	+1.3
1,528,238	+		Echvi_1322	0.66	-0.4
1,528,238	+		Echvi_1322	0.66	+0.2
1,528,239	-		Echvi_1322	0.66	+0.3
1,528,239	-		Echvi_1322	0.66	-2.0
1,528,240	+		Echvi_1322	0.66	-0.2
1,528,240	+		Echvi_1322	0.66	+0.1
1,528,240	+		Echvi_1322	0.66	-0.8
1,528,240	+		Echvi_1322	0.66	+0.2
1,528,240	+		Echvi_1322	0.66	-1.1
1,528,240	+		Echvi_1322	0.66	-1.1
1,528,241	-		Echvi_1322	0.67	-1.9
1,528,241	-		Echvi_1322	0.67	+0.5
1,528,285	+		Echvi_1322	0.74	+1.1
1,528,285	+		Echvi_1322	0.74	-0.3
1,528,285	+		Echvi_1322	0.74	-1.5
1,528,286	-		Echvi_1322	0.75	-0.7
1,528,308	-		Echvi_1322	0.78	-0.6
1,528,312	+		Echvi_1322	0.79	+0.1
1,528,315	-		Echvi_1322	0.80	+0.1
1,528,358	-		Echvi_1322	0.87	-0.8
1,528,358	-		Echvi_1322	0.87	-0.1
1,528,389	+				-0.2
1,528,564	-				-0.0
1,528,570	-				+0.2
1,528,570	-				+0.2
1,528,605	+				+0.2
1,528,606	-				-1.9
1,528,607	+				-0.1
1,528,608	-				-0.8
1,528,819	+		Echvi_1323	0.22	-1.6
1,528,820	-		Echvi_1323	0.22	+0.6
1,528,845	+		Echvi_1323	0.24	-0.6
1,528,876	+		Echvi_1323	0.27	+2.1
1,528,919	+		Echvi_1323	0.31	-0.2
1,529,006	+		Echvi_1323	0.39	+0.4
1,529,006	+		Echvi_1323	0.39	-0.1
1,529,006	+		Echvi_1323	0.39	+0.6
1,529,007	-		Echvi_1323	0.39	+0.3
1,529,138	+		Echvi_1323	0.52	+0.1
1,529,138	+		Echvi_1323	0.52	+2.7
1,529,138	+		Echvi_1323	0.52	+1.4
1,529,139	-		Echvi_1323	0.52	-0.6
1,529,158	+		Echvi_1323	0.54	-0.3
1,529,184	-		Echvi_1323	0.56	-1.7
1,529,245	-		Echvi_1323	0.62	+0.3
1,529,298	-		Echvi_1323	0.67	-2.3
1,529,344	+		Echvi_1323	0.71	-0.9
1,529,344	+		Echvi_1323	0.71	+0.4
1,529,345	-		Echvi_1323	0.71	+0.2