Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1303

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
1,498,022	+		Echvi_1301	0.38	-1.6
1,498,072	+		Echvi_1301	0.45	-1.6
1,498,072	+		Echvi_1301	0.45	-0.1
1,498,073	-		Echvi_1301	0.45	+0.4
1,498,089	+		Echvi_1301	0.47	+1.1
1,498,089	+		Echvi_1301	0.47	+1.1
1,498,105	-		Echvi_1301	0.49	-0.2
1,498,153	+		Echvi_1301	0.56	-0.2
1,498,153	+		Echvi_1301	0.56	+1.2
1,498,153	+		Echvi_1301	0.56	-1.5
1,498,153	+		Echvi_1301	0.56	+0.1
1,498,154	-		Echvi_1301	0.56	-0.0
1,498,154	-		Echvi_1301	0.56	-1.6
1,498,265	-		Echvi_1301	0.72	-0.7
1,498,275	+		Echvi_1301	0.74	+0.1
1,498,276	-		Echvi_1301	0.74	+1.7
1,498,276	-		Echvi_1301	0.74	+1.3
1,498,316	-		Echvi_1301	0.80	+0.7
1,498,318	-		Echvi_1301	0.80	+0.2
1,498,360	-		Echvi_1301	0.86	-0.3
1,498,368	+		Echvi_1301	0.87	-0.1
1,498,404	+				-1.6
1,498,417	+				+0.6
1,498,418	-				-0.6
1,498,418	-				+0.6
1,498,418	-				-1.5
1,498,418	-				-0.1
1,498,418	-				-1.2
1,498,447	-				+0.7
1,498,467	+				+0.2
1,498,496	+				-0.0
1,498,496	+				+1.8
1,498,528	-		Echvi_1302	0.15	-2.6
1,498,560	+		Echvi_1302	0.24	-0.5
1,498,580	+		Echvi_1302	0.29	+0.0
1,498,622	-		Echvi_1302	0.40	-2.6
1,498,716	+		Echvi_1302	0.65	-0.1
1,498,716	+		Echvi_1302	0.65	+0.7
1,498,772	+		Echvi_1302	0.79	+1.1
1,498,773	-		Echvi_1302	0.80	-0.9
1,498,827	+				+1.2
1,498,828	-				-0.1
1,498,828	-				+0.0
1,498,852	+				+0.1
1,498,909	+				+0.1
1,498,914	+				+1.0
1,498,914	+				+0.7
1,498,915	-				+1.0
1,498,915	-				+0.1
1,498,936	-				-0.3
1,498,946	-				-1.3
1,498,971	-				-0.3
1,498,999	+				-0.2
1,498,999	+				-0.1
1,499,004	-				-0.2
1,499,007	+				+0.9
1,499,008	-				-0.7
1,499,008	-				-0.6
1,499,025	+				-0.4
1,499,026	-				-1.0
1,499,026	-				-1.2
1,499,028	+				-0.7
1,499,088	+		Echvi_1303	0.16	+0.1
1,499,122	+		Echvi_1303	0.21	-0.8
1,499,122	+		Echvi_1303	0.21	-2.4
1,499,122	+		Echvi_1303	0.21	-0.7
1,499,122	+		Echvi_1303	0.21	-1.0
1,499,123	-		Echvi_1303	0.21	-1.7
1,499,123	-		Echvi_1303	0.21	+0.0
1,499,123	-		Echvi_1303	0.21	-0.6
1,499,133	+		Echvi_1303	0.23	-0.1
1,499,150	+		Echvi_1303	0.25	-0.4
1,499,150	+		Echvi_1303	0.25	-1.2
1,499,150	+		Echvi_1303	0.25	+1.7
1,499,150	+		Echvi_1303	0.25	-0.9
1,499,150	+		Echvi_1303	0.25	-1.9
1,499,150	+		Echvi_1303	0.25	+0.1
1,499,151	-		Echvi_1303	0.26	-0.8
1,499,151	-		Echvi_1303	0.26	-1.8
1,499,151	-		Echvi_1303	0.26	-2.8
1,499,151	-		Echvi_1303	0.26	-0.7
1,499,212	-		Echvi_1303	0.35	+0.1
1,499,283	+		Echvi_1303	0.46	-0.8
1,499,283	+		Echvi_1303	0.46	-0.2
1,499,283	+		Echvi_1303	0.46	-0.6
1,499,436	+		Echvi_1303	0.70	-0.6
1,499,436	+		Echvi_1303	0.70	-1.5
1,499,436	+		Echvi_1303	0.70	-1.6
1,499,437	-		Echvi_1303	0.70	-0.7
1,499,437	-		Echvi_1303	0.70	-0.7
1,499,437	-		Echvi_1303	0.70	-1.4
1,499,437	-		Echvi_1303	0.70	-0.6
1,499,540	+		Echvi_1303	0.86	+0.1
1,499,567	-		Echvi_1303	0.90	-1.1
1,499,687	+				-1.0
1,499,688	-				+0.1
1,499,688	-				-0.4
1,499,740	+				+0.7
1,499,740	+				+0.2
1,499,741	-				+0.7
1,499,741	-				-1.4
1,499,747	-				-1.3
1,499,762	+				+0.2
1,499,789	+				-1.5
1,499,790	-				+1.2
1,499,793	+				-0.2
1,499,793	+				-0.3
1,499,793	+				-1.9
1,499,794	-				+0.4
1,499,794	-				+0.0
1,499,794	-				-0.1
1,499,818	+				-1.6
1,499,937	+				-0.2
1,499,962	+				-0.0
1,499,962	+				-0.1
1,499,963	-				-0.7
1,499,981	+				-0.2
1,499,981	+				+0.4
1,499,996	+				+0.6
1,500,103	+				-1.5
1,500,104	-				+0.7
1,500,104	-				+1.0
1,500,104	-				-0.6
1,500,171	+		Echvi_1304	0.17	-0.3
1,500,324	+		Echvi_1304	0.44	+0.5
1,500,344	-		Echvi_1304	0.47	+0.2
1,500,354	+		Echvi_1304	0.49	-1.9
1,500,396	+		Echvi_1304	0.57	-0.7
1,500,397	-		Echvi_1304	0.57	+0.8
1,500,440	-		Echvi_1304	0.64	-1.9
1,500,440	-		Echvi_1304	0.64	-0.1
1,500,440	-		Echvi_1304	0.64	+0.0
1,500,518	-		Echvi_1304	0.78	+0.2
1,500,528	-		Echvi_1304	0.80	-0.1
1,500,528	-		Echvi_1304	0.80	+1.0
1,500,528	-		Echvi_1304	0.80	-0.8
1,500,528	-		Echvi_1304	0.80	+0.9
1,500,590	+				+0.0
1,500,591	-				-3.2
1,500,608	-				-0.4
1,500,608	-				-0.3
1,500,608	-				+1.6
1,500,615	+				+0.6
1,500,628	+				+0.9
1,500,629	-				-0.2