Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1273

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
1,458,582	+		Echvi_1270	0.49	-0.3
1,458,583	-		Echvi_1270	0.50	-0.2
1,458,632	+		Echvi_1270	0.57	+0.2
1,458,633	-		Echvi_1270	0.57	+0.5
1,458,637	+		Echvi_1270	0.58	+0.6
1,458,638	-		Echvi_1270	0.58	+0.9
1,458,748	+		Echvi_1270	0.75	-0.3
1,458,750	+		Echvi_1270	0.76	+0.5
1,458,775	+		Echvi_1270	0.79	+4.6
1,458,775	+		Echvi_1270	0.79	-0.1
1,458,801	+		Echvi_1270	0.83	+0.2
1,458,801	+		Echvi_1270	0.83	-0.4
1,458,884	-				+0.2
1,458,904	+				-1.2
1,458,908	-				-1.6
1,458,908	-				-0.5
1,458,908	-				-1.9
1,458,910	+				-0.4
1,458,913	-				+0.6
1,458,913	-				-0.6
1,458,945	-				-0.5
1,458,972	-				+0.2
1,458,975	+				+0.4
1,458,975	+				-0.5
1,458,976	-				-0.4
1,458,979	+				+0.0
1,458,979	+				+1.1
1,458,987	+				-0.9
1,458,989	+				+1.0
1,458,989	+				+0.7
1,458,990	-				-2.3
1,459,030	+				-1.8
1,459,051	+				+2.0
1,459,093	+		Echvi_1271	0.14	+1.2
1,459,093	+		Echvi_1271	0.14	-0.5
1,459,164	+		Echvi_1271	0.51	-1.4
1,459,170	-		Echvi_1271	0.54	-2.5
1,459,211	+		Echvi_1271	0.75	-1.2
1,459,225	-		Echvi_1271	0.82	+1.8
1,459,277	+				-0.8
1,459,277	+				-0.8
1,459,278	-				+0.4
1,459,278	-				+0.5
1,459,284	+		Echvi_1272	0.10	+1.7
1,459,284	+		Echvi_1272	0.10	-0.9
1,459,284	+		Echvi_1272	0.10	+2.2
1,459,290	+		Echvi_1272	0.12	-0.9
1,459,295	+		Echvi_1272	0.14	-0.4
1,459,296	-		Echvi_1272	0.14	-0.1
1,459,299	-		Echvi_1272	0.15	+1.1
1,459,305	-		Echvi_1272	0.18	-0.1
1,459,318	+		Echvi_1272	0.22	-0.1
1,459,319	-		Echvi_1272	0.22	-0.1
1,459,373	+		Echvi_1272	0.41	-0.9
1,459,516	+				-0.3
1,459,516	+				-1.1
1,459,517	-				-2.0
1,459,517	-				-0.5
1,459,517	-				-0.1
1,459,517	-				-2.3
1,459,518	+				-0.3
1,459,518	+				-0.4
1,459,518	+				+0.5
1,459,583	+				-0.2
1,459,584	-				-1.2
1,459,610	+				-0.7
1,459,658	+				-0.7
1,459,673	+				-1.2
1,459,674	-				-0.2
1,459,710	+		Echvi_1273	0.12	-0.8
1,459,711	-		Echvi_1273	0.12	+0.2
1,459,712	+		Echvi_1273	0.12	-0.2
1,459,713	-		Echvi_1273	0.12	+0.9
1,459,713	-		Echvi_1273	0.12	-1.5
1,459,736	+		Echvi_1273	0.14	-0.6
1,459,737	-		Echvi_1273	0.14	-0.3
1,459,737	-		Echvi_1273	0.14	-1.9
1,459,859	+		Echvi_1273	0.23	-1.1
1,459,880	+		Echvi_1273	0.24	+2.2
1,459,937	-		Echvi_1273	0.28	-1.7
1,460,039	+		Echvi_1273	0.36	-1.5
1,460,039	+		Echvi_1273	0.36	-2.5
1,460,079	+		Echvi_1273	0.39	-1.5
1,460,080	-		Echvi_1273	0.39	+1.8
1,460,080	-		Echvi_1273	0.39	+1.0
1,460,080	-		Echvi_1273	0.39	-1.7
1,460,090	+		Echvi_1273	0.39	-0.9
1,460,101	-		Echvi_1273	0.40	-2.5
1,460,109	+		Echvi_1273	0.41	-2.2
1,460,110	-		Echvi_1273	0.41	-1.8
1,460,110	-		Echvi_1273	0.41	-1.3
1,460,111	+		Echvi_1273	0.41	-0.8
1,460,111	+		Echvi_1273	0.41	+0.0
1,460,111	+		Echvi_1273	0.41	-0.3
1,460,111	+		Echvi_1273	0.41	-2.5
1,460,112	-		Echvi_1273	0.41	-2.1
1,460,167	-		Echvi_1273	0.45	-0.2
1,460,170	+		Echvi_1273	0.45	-2.2
1,460,170	+		Echvi_1273	0.45	+0.4
1,460,170	+		Echvi_1273	0.45	-0.1
1,460,201	-		Echvi_1273	0.47	-0.9
1,460,255	+		Echvi_1273	0.51	+0.2
1,460,255	+		Echvi_1273	0.51	+0.4
1,460,255	+		Echvi_1273	0.51	-0.8
1,460,255	+		Echvi_1273	0.51	-0.1
1,460,256	-		Echvi_1273	0.51	-2.1
1,460,261	+		Echvi_1273	0.52	-2.4
1,460,261	+		Echvi_1273	0.52	+0.6
1,460,261	+		Echvi_1273	0.52	+1.2
1,460,262	-		Echvi_1273	0.52	-0.6
1,460,262	-		Echvi_1273	0.52	-1.7
1,460,262	-		Echvi_1273	0.52	+0.9
1,460,262	-		Echvi_1273	0.52	+1.5
1,460,441	+		Echvi_1273	0.65	-2.1
1,460,442	-		Echvi_1273	0.65	-1.2
1,460,442	-		Echvi_1273	0.65	-1.2
1,460,442	-		Echvi_1273	0.65	-0.8
1,460,442	-		Echvi_1273	0.65	-0.9
1,460,442	-		Echvi_1273	0.65	-0.1
1,460,442	-		Echvi_1273	0.65	-1.7
1,460,604	+		Echvi_1273	0.77	-0.4
1,460,604	+		Echvi_1273	0.77	+0.2
1,460,699	-		Echvi_1273	0.83	+1.2
1,460,776	-		Echvi_1273	0.89	+0.7
1,460,932	+				-1.0
1,460,946	-				-0.2
1,461,012	-				+0.3
1,461,019	-				+0.2
1,461,024	+				+0.1
1,461,024	+				-0.7
1,461,024	+				+0.2
1,461,024	+				-0.1
1,461,025	-				-0.6
1,461,025	-				-0.5
1,461,126	+				+1.0
1,461,127	-				+0.8
1,461,130	+				+2.0
1,461,204	+				+1.1
1,461,205	-				+1.1
1,461,255	+				+0.8
1,461,255	+				-1.4
1,461,255	+				+0.9
1,461,255	+				+0.2
1,461,255	+				-1.0
1,461,256	-				+0.7
1,461,256	-				+0.8
1,461,405	+		Echvi_1274	0.12	-0.7
1,461,405	+		Echvi_1274	0.12	-0.6
1,461,405	+		Echvi_1274	0.12	-2.0
1,461,414	+		Echvi_1274	0.12	-0.2
1,461,414	+		Echvi_1274	0.12	-0.5
1,461,414	+		Echvi_1274	0.12	-0.8
1,461,414	+		Echvi_1274	0.12	-0.2
1,461,433	-		Echvi_1274	0.13	+0.9
1,461,433	-		Echvi_1274	0.13	+0.3
1,461,451	+		Echvi_1274	0.14	-0.6
1,461,452	-		Echvi_1274	0.15	+0.9
1,461,564	+		Echvi_1274	0.21	+0.4
1,461,564	+		Echvi_1274	0.21	+0.7
1,461,631	-		Echvi_1274	0.25	+0.3
1,461,633	+		Echvi_1274	0.25	-0.3
1,461,712	+		Echvi_1274	0.30	-1.0
1,461,734	+		Echvi_1274	0.31	-1.0
1,461,735	-		Echvi_1274	0.31	+1.2
1,461,787	-		Echvi_1274	0.34	-0.2