Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1203

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
1,380,942	+				-0.5
1,380,943	-				-0.0
1,380,960	+				+1.3
1,380,960	+				-1.1
1,380,960	+				+2.3
1,380,960	+				-1.4
1,380,960	+				+1.3
1,380,960	+				-0.5
1,380,961	-				+0.2
1,380,961	-				-0.1
1,380,961	-				+0.2
1,380,963	-				+0.3
1,381,000	+				-0.1
1,381,001	-				-0.6
1,381,002	+				+1.7
1,381,005	-				+0.2
1,381,079	+				-1.1
1,381,080	-				+0.7
1,381,080	-				-0.6
1,381,080	-				-0.1
1,381,080	-				-0.2
1,381,080	-				-1.3
1,381,114	+				-1.1
1,381,115	-				-0.5
1,381,126	-				-0.3
1,381,126	-				-2.7
1,381,195	+				-0.3
1,381,196	-				-1.0
1,381,196	-				+0.7
1,381,196	-				-2.5
1,381,206	+				-1.9
1,381,206	+				+1.9
1,381,306	-				+0.4
1,381,306	-				+0.5
1,381,310	+				+0.1
1,381,332	+				-0.8
1,381,332	+				-0.6
1,381,333	-				+2.3
1,381,495	+		Echvi_1203	0.24	+0.0
1,381,496	-		Echvi_1203	0.24	+1.5
1,381,496	-		Echvi_1203	0.24	+1.1
1,381,500	+		Echvi_1203	0.25	-1.2
1,381,501	-		Echvi_1203	0.25	-0.2
1,381,559	+		Echvi_1203	0.31	+0.6
1,381,560	-		Echvi_1203	0.31	-0.4
1,381,560	-		Echvi_1203	0.31	-0.0
1,381,764	+		Echvi_1203	0.51	-0.9
1,381,854	+		Echvi_1203	0.60	+1.0
1,382,026	+		Echvi_1203	0.78	-1.3
1,382,027	-		Echvi_1203	0.78	-0.4
1,382,027	-		Echvi_1203	0.78	-0.2
1,382,068	-		Echvi_1203	0.82	+0.9
1,382,083	-		Echvi_1203	0.84	+1.3
1,382,083	-		Echvi_1203	0.84	-0.1
1,382,204	+				+1.3
1,382,205	-				-1.3
1,382,205	-				-1.8
1,382,258	-				+0.3
1,382,394	+				-0.5
1,382,471	+		Echvi_1204	0.17	+1.7
1,382,512	+		Echvi_1204	0.22	-1.7
1,382,650	-		Echvi_1204	0.37	-1.0
1,382,729	+		Echvi_1204	0.46	-0.3
1,382,825	+		Echvi_1204	0.57	+1.7
1,382,828	+		Echvi_1204	0.57	+0.7
1,382,828	+		Echvi_1204	0.57	-1.8
1,382,828	+		Echvi_1204	0.57	+0.7
1,382,886	-		Echvi_1204	0.64	-0.6
1,382,886	-		Echvi_1204	0.64	-0.9
1,382,899	+		Echvi_1204	0.65	+0.2
1,382,987	-		Echvi_1204	0.75	-1.0
1,383,045	+		Echvi_1204	0.82	-0.3
1,383,045	+		Echvi_1204	0.82	-0.9
1,383,082	+		Echvi_1204	0.86	+0.9
1,383,104	+		Echvi_1204	0.88	-0.5
1,383,104	+		Echvi_1204	0.88	+0.9
1,383,104	+		Echvi_1204	0.88	+0.6
1,383,134	-				+0.1
1,383,179	+				+0.5
1,383,198	-				-0.6