Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1079

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
1,240,957	+				-0.1
1,240,980	+				+1.9
1,241,025	-				+0.0
1,241,045	-				-0.0
1,241,101	+				+1.3
1,241,101	+				-0.6
1,241,104	+				+1.6
1,241,104	+				+0.5
1,241,107	+				-1.2
1,241,132	-				-0.5
1,241,170	+				+0.5
1,241,176	+				+1.3
1,241,185	-				+0.1
1,241,214	+				+0.0
1,241,504	-		Echvi_1078	0.48	-0.2
1,241,509	+		Echvi_1078	0.49	-0.7
1,241,509	+		Echvi_1078	0.49	-0.5
1,241,510	-		Echvi_1078	0.49	-0.4
1,241,575	+		Echvi_1078	0.59	+0.7
1,241,612	+		Echvi_1078	0.64	+1.2
1,241,682	-		Echvi_1078	0.75	-1.9
1,241,696	-		Echvi_1078	0.77	-1.1
1,241,727	+		Echvi_1078	0.81	-1.3
1,241,903	+				+0.6
1,241,903	+				-1.9
1,241,903	+				+0.2
1,241,904	-				+0.8
1,241,904	-				+3.3
1,241,939	+				-0.3
1,242,136	+				+1.0
1,242,137	-				+0.5
1,242,143	+				+0.3
1,242,143	+				-0.4
1,242,144	-				+0.7
1,242,174	-				-0.9
1,242,184	+				+1.2
1,242,185	-				-0.9
1,242,215	+				-0.7
1,242,216	-				+0.9
1,242,216	-				-1.0
1,242,247	+				+2.4
1,242,264	-				-2.2
1,242,267	-				-0.5
1,242,283	+				-0.2
1,242,336	+				-0.6
1,242,363	-				+0.6
1,242,491	-				-0.7
1,242,509	+				+0.4
1,242,510	-				-0.4
1,242,513	-				+0.4
1,242,513	-				+0.3
1,242,513	-				+0.6
1,242,515	-				+0.5
1,242,595	+		Echvi_1080	0.25	+1.8
1,242,596	-		Echvi_1080	0.26	+1.2
1,242,610	+		Echvi_1080	0.30	+0.2
1,242,619	+		Echvi_1080	0.32	+1.0
1,242,619	+		Echvi_1080	0.32	-0.0
1,242,619	+		Echvi_1080	0.32	-0.4
1,242,656	+		Echvi_1080	0.44	+2.3
1,242,736	+		Echvi_1080	0.68	-0.5
1,242,818	-				+0.1
1,242,818	-				+0.0
1,242,858	-				+0.5
1,242,915	+		Echvi_1081	0.10	-0.3
1,243,021	+		Echvi_1081	0.30	+0.3
1,243,022	-		Echvi_1081	0.30	+2.0
1,243,022	-		Echvi_1081	0.30	-0.4
1,243,115	+		Echvi_1081	0.47	-1.3
1,243,116	-		Echvi_1081	0.47	+0.6
1,243,124	+		Echvi_1081	0.48	-0.6
1,243,125	-		Echvi_1081	0.48	+1.1
1,243,156	+		Echvi_1081	0.54	-0.7