Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1015

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
1,177,227	+		Echvi_1013	0.54	+0.5
1,177,228	-		Echvi_1013	0.55	+1.7
1,177,248	+		Echvi_1013	0.56	-1.2
1,177,248	+		Echvi_1013	0.56	+0.8
1,177,249	-		Echvi_1013	0.56	-0.4
1,177,261	+		Echvi_1013	0.57	+0.3
1,177,261	+				+3.9
1,177,261	+		Echvi_1013	0.57	+2.0
1,177,262	-		Echvi_1013	0.57	-0.6
1,177,262	-		Echvi_1013	0.57	+0.4
1,177,262	-		Echvi_1013	0.57	-1.3
1,177,262	-		Echvi_1013	0.57	-0.0
1,177,306	+		Echvi_1013	0.60	+1.5
1,177,306	+		Echvi_1013	0.60	+0.9
1,177,306	+		Echvi_1013	0.60	-1.6
1,177,307	-		Echvi_1013	0.60	-0.2
1,177,307	-		Echvi_1013	0.60	+1.9
1,177,310	+		Echvi_1013	0.60	-0.7
1,177,311	-		Echvi_1013	0.60	-0.5
1,177,311	-		Echvi_1013	0.60	+1.6
1,177,327	+		Echvi_1013	0.61	+1.1
1,177,328	-		Echvi_1013	0.61	-1.4
1,177,328	-		Echvi_1013	0.61	+0.5
1,177,388	+		Echvi_1013	0.65	+0.8
1,177,389	-		Echvi_1013	0.65	+0.8
1,177,423	+		Echvi_1013	0.67	+0.0
1,177,423	+		Echvi_1013	0.67	+3.3
1,177,423	+		Echvi_1013	0.67	+0.3
1,177,424	-		Echvi_1013	0.67	+0.4
1,177,424	-		Echvi_1013	0.67	-1.1
1,177,489	+		Echvi_1013	0.72	+0.3
1,177,490	-		Echvi_1013	0.72	+0.3
1,177,497	+		Echvi_1013	0.72	+2.7
1,177,527	+		Echvi_1013	0.74	+0.1
1,177,527	+		Echvi_1013	0.74	-0.4
1,177,527	+		Echvi_1013	0.74	+1.3
1,177,627	+		Echvi_1013	0.81	-0.3
1,177,628	-		Echvi_1013	0.81	-1.4
1,177,628	-		Echvi_1013	0.81	-0.7
1,177,628	-		Echvi_1013	0.81	+2.5
1,177,751	-		Echvi_1013	0.89	-0.0
1,177,824	+				+0.1
1,177,825	-				-0.6
1,177,847	+				+0.3
1,177,848	-				-1.3
1,177,849	+				-0.3
1,177,850	-				-0.2
1,177,906	+				+1.0
1,177,907	-				-0.6
1,177,915	+				+0.9
1,177,916	-				+1.0
1,177,916	-				-0.8
1,177,916	-				+0.1
1,177,916	-				+1.2
1,177,943	-				+0.6
1,178,002	+				+0.9
1,178,006	-				+1.3
1,178,042	+		Echvi_1014	0.13	+1.0
1,178,074	+		Echvi_1014	0.33	-0.7
1,178,074	+		Echvi_1014	0.33	-1.5
1,178,074	+		Echvi_1014	0.33	+0.5
1,178,074	+		Echvi_1014	0.33	+0.1
1,178,075	-		Echvi_1014	0.33	-1.3
1,178,075	-		Echvi_1014	0.33	+0.1
1,178,075	-		Echvi_1014	0.33	-0.5
1,178,156	+		Echvi_1014	0.84	+0.8
1,178,179	-				+0.5
1,179,212	+		Echvi_1015	0.69	+1.6
1,179,212	+		Echvi_1015	0.69	+0.8
1,179,215	+		Echvi_1015	0.70	+2.3
1,179,236	+		Echvi_1015	0.71	+0.3
1,179,236	+		Echvi_1015	0.71	+0.7
1,179,276	-		Echvi_1015	0.74	+1.6
1,179,638	-				+0.4
1,179,638	-				+0.3
1,179,638	-				-1.2
1,180,019	+				+0.4
1,180,019	+				-0.4
1,180,067	-				+0.2
1,180,067	-				+0.3
1,180,085	-				-1.2
1,180,086	+				+0.6
1,180,086	+				+0.4
1,180,087	-				+0.6
1,180,094	+				-0.9
1,180,094	+				-0.0
1,180,105	+				+0.5
1,180,106	-				+0.3
1,180,130	-				-0.8
1,180,217	-		Echvi_1017	0.13	+2.0
1,180,227	+		Echvi_1017	0.14	-0.1
1,180,233	-		Echvi_1017	0.15	-1.3
1,180,316	+		Echvi_1017	0.25	+0.3
1,180,317	-		Echvi_1017	0.25	-0.9
1,180,321	-		Echvi_1017	0.26	-0.7
1,180,341	+		Echvi_1017	0.28	-0.9
1,180,380	-		Echvi_1017	0.33	+0.4
1,180,384	+		Echvi_1017	0.33	+1.3
1,180,395	+		Echvi_1017	0.34	+1.1
1,180,396	-		Echvi_1017	0.34	+0.4
1,180,396	-		Echvi_1017	0.34	-1.6
1,180,424	+		Echvi_1017	0.38	-0.6
1,180,424	+		Echvi_1017	0.38	-0.3
1,180,433	+		Echvi_1017	0.39	+0.4
1,180,434	-		Echvi_1017	0.39	+0.1
1,180,434	-		Echvi_1017	0.39	+0.7
1,180,439	+		Echvi_1017	0.39	+0.3
1,180,439	+		Echvi_1017	0.39	+1.1
1,180,440	-		Echvi_1017	0.40	-0.2
1,180,440	-		Echvi_1017	0.40	+0.1
1,180,478	+		Echvi_1017	0.44	-1.2
1,180,484	+		Echvi_1017	0.45	-0.4
1,180,485	-		Echvi_1017	0.45	-0.4
1,180,485	-		Echvi_1017	0.45	-0.9
1,180,485	-		Echvi_1017	0.45	+2.8
1,180,506	-		Echvi_1017	0.47	-1.3
1,180,506	-		Echvi_1017	0.47	+0.1
1,180,510	+		Echvi_1017	0.48	-0.8
1,180,510	+		Echvi_1017	0.48	-0.5
1,180,531	-		Echvi_1017	0.50	-1.5
1,180,531	-		Echvi_1017	0.50	-1.1
1,180,531	-		Echvi_1017	0.50	+0.9
1,180,533	+		Echvi_1017	0.51	+0.3
1,180,534	-		Echvi_1017	0.51	-0.0
1,180,557	+		Echvi_1017	0.53	+1.0
1,180,558	-		Echvi_1017	0.53	+1.1
1,180,569	+		Echvi_1017	0.55	-0.0
1,180,574	+		Echvi_1017	0.55	-1.3