Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0999

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
1,159,251	+				-0.8
1,159,253	+				-0.0
1,159,253	+				-0.3
1,159,253	+				+0.0
1,159,253	+				-0.1
1,159,254	-				-0.3
1,159,254	-				-0.0
1,159,260	-				-1.0
1,159,265	+				-1.3
1,159,266	-				-0.8
1,159,294	-				+1.2
1,159,306	-				+0.7
1,159,312	+				+0.2
1,159,313	-				-0.4
1,159,313	-				-1.1
1,159,313	-				-0.2
1,159,313	-				+1.3
1,159,332	+				+0.5
1,159,332	+				-0.3
1,159,332	+				+2.3
1,159,332	+				+0.0
1,159,332	+				-0.1
1,159,332	+				+0.7
1,159,333	-				-0.5
1,159,333	-				-2.5
1,159,333	-				+0.3
1,159,348	-				+1.5
1,159,418	+		Echvi_0999	0.16	-0.1
1,159,418	+		Echvi_0999	0.16	-1.9
1,159,418	+		Echvi_0999	0.16	+0.2
1,159,460	-		Echvi_0999	0.22	+0.1
1,159,500	+		Echvi_0999	0.27	+1.8
1,159,512	-		Echvi_0999	0.28	-1.2
1,159,520	+		Echvi_0999	0.30	-0.1
1,159,520	+		Echvi_0999	0.30	+0.7
1,159,520	+		Echvi_0999	0.30	-0.1
1,159,520	+		Echvi_0999	0.30	+0.3
1,159,521	-		Echvi_0999	0.30	+0.2
1,159,564	+		Echvi_0999	0.35	-1.3
1,159,565	-		Echvi_0999	0.35	-0.9
1,159,565	-		Echvi_0999	0.35	-1.6
1,159,565	-		Echvi_0999	0.35	+0.2
1,159,630	-		Echvi_0999	0.44	-0.7
1,159,664	+		Echvi_0999	0.48	-1.5
1,159,665	-		Echvi_0999	0.48	-0.0
1,159,665	-		Echvi_0999	0.48	+0.4
1,159,680	+		Echvi_0999	0.50	-1.0
1,159,709	+		Echvi_0999	0.54	+1.1
1,159,709	+		Echvi_0999	0.54	+0.3
1,159,709	+		Echvi_0999	0.54	+0.1
1,159,806	+		Echvi_0999	0.67	-1.0
1,159,830	+		Echvi_0999	0.70	-1.1
1,159,868	+		Echvi_0999	0.75	+1.3
1,159,869	-		Echvi_0999	0.75	-0.3
1,159,869	-		Echvi_0999	0.75	-0.5
1,159,871	+		Echvi_0999	0.75	-0.4
1,159,871	+		Echvi_0999	0.75	-0.7
1,159,871	+		Echvi_0999	0.75	+1.3
1,159,871	+		Echvi_0999	0.75	-0.3
1,159,872	-		Echvi_0999	0.76	-0.0
1,159,872	-		Echvi_0999	0.76	-1.6
1,159,872	-		Echvi_0999	0.76	-0.5
1,159,881	+		Echvi_0999	0.77	-0.0
1,159,901	+		Echvi_0999	0.79	-0.9
1,159,926	+		Echvi_0999	0.83	-0.5
1,159,926	+		Echvi_0999	0.83	+0.1
1,159,932	-		Echvi_0999	0.83	-0.3
1,159,932	-		Echvi_0999	0.83	-0.5
1,159,957	+		Echvi_0999	0.87	-0.9
1,159,958	-		Echvi_0999	0.87	+0.1
1,159,961	+		Echvi_0999	0.87	-0.0
1,159,961	+		Echvi_0999	0.87	-1.2
1,159,962	-		Echvi_0999	0.87	+0.7
1,159,962	-		Echvi_0999	0.87	+0.4
1,159,962	-		Echvi_0999	0.87	-2.0
1,160,056	+				-1.2
1,160,073	+				-1.1
1,160,078	-				-0.7
1,160,078	-				+0.2
1,160,078	-				+1.6
1,160,105	+				-0.7
1,160,165	+				+1.0
1,160,203	-				-1.2
1,160,266	+				-0.2
1,160,266	+				+0.0
1,160,267	-				-0.4
1,160,267	-				-1.2
1,160,267	-				-0.9
1,160,301	+				-0.2
1,160,310	+				-0.4
1,160,311	-				-0.2
1,160,366	-		Echvi_1000	0.17	+0.3
1,160,375	+		Echvi_1000	0.19	-0.5
1,160,414	+		Echvi_1000	0.31	-0.3
1,160,414	+		Echvi_1000	0.31	+0.2
1,160,414	+		Echvi_1000	0.31	+0.8
1,160,414	+		Echvi_1000	0.31	-0.4
1,160,414	+		Echvi_1000	0.31	-0.3
1,160,414	+		Echvi_1000	0.31	+0.5
1,160,414	+		Echvi_1000	0.31	-0.9
1,160,414	+		Echvi_1000	0.31	-0.7
1,160,415	-		Echvi_1000	0.32	+1.7
1,160,428	-		Echvi_1000	0.35	-0.3
1,160,428	-		Echvi_1000	0.35	-0.1
1,160,503	-		Echvi_1000	0.58	-1.1
1,160,503	-		Echvi_1000	0.58	-0.5
1,160,658	-				-0.7
1,160,700	+				-0.7
1,160,701	-				-1.3
1,160,725	+		Echvi_1001	0.11	-0.7
1,160,726	-		Echvi_1001	0.12	-0.1
1,160,726	-		Echvi_1001	0.12	+0.7
1,160,726	-		Echvi_1001	0.12	-0.8
1,160,745	+		Echvi_1001	0.16	+0.2
1,160,767	+		Echvi_1001	0.20	-0.9
1,160,864	+		Echvi_1001	0.41	+0.2
1,160,864	+		Echvi_1001	0.41	-0.4
1,160,903	-		Echvi_1001	0.50	-1.4
1,160,903	-		Echvi_1001	0.50	+0.5
1,160,903	-		Echvi_1001	0.50	+0.7
1,160,953	-		Echvi_1001	0.60	-0.3
1,160,957	+		Echvi_1001	0.61	+0.6
1,160,958	-		Echvi_1001	0.62	-0.5
1,161,010	+		Echvi_1001	0.73	+0.9
1,161,011	-		Echvi_1001	0.73	-1.0
1,161,011	-		Echvi_1001	0.73	-0.0