Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0939

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
1,083,147	-				+0.3
1,083,193	-				-0.6
1,083,200	-				+1.9
1,083,213	+				+0.1
1,083,213	+				+0.5
1,083,213	+				+0.1
1,083,214	-				-0.1
1,083,214	-				+0.1
1,083,217	+				+0.1
1,083,218	-				-0.1
1,083,218	-				+1.8
1,083,300	+				+0.0
1,083,301	-				+2.3
1,083,301	-				-0.9
1,083,301	-				+0.7
1,083,301	-				-0.4
1,083,376	+				-1.0
1,083,421	+				-0.4
1,083,421	+				-2.6
1,083,422	-				+0.7
1,083,481	+				+0.7
1,083,493	-				-1.1
1,083,502	+				-0.5
1,083,503	-				+1.1
1,083,507	-				-0.3
1,083,513	+				+2.3
1,083,513	+				+0.1
1,083,514	-				-0.8
1,083,514	-				+1.1
1,083,516	+				+0.5
1,083,516	+				+0.7
1,083,517	-				+1.5
1,083,517	-				-0.2
1,083,652	-		Echvi_0938	0.26	-0.8
1,083,661	+		Echvi_0938	0.28	+1.3
1,083,682	+		Echvi_0938	0.32	-0.1
1,083,682	+		Echvi_0938	0.32	-0.7
1,083,682	+		Echvi_0938	0.32	-0.0
1,083,683	-		Echvi_0938	0.32	+0.7
1,083,850	+		Echvi_0938	0.64	+0.2
1,083,850	+		Echvi_0938	0.64	+0.6
1,083,850	+		Echvi_0938	0.64	-1.2
1,083,851	-		Echvi_0938	0.64	+1.7
1,083,972	-		Echvi_0938	0.88	-1.5
1,083,990	+				+2.6
1,084,012	-				-0.9
1,084,089	+				-0.0
1,084,089	+				-1.5
1,084,090	-				+1.0
1,084,090	-				+0.9
1,084,090	-				-0.5
1,084,140	-				+0.9
1,084,157	+				+1.0
1,084,158	-				-2.0
1,084,180	-				+0.5
1,084,192	-				-0.2
1,084,192	-				+1.0
1,084,216	+				-0.0
1,084,216	+				-0.8
1,084,289	-		Echvi_0939	0.13	-0.6
1,084,303	+		Echvi_0939	0.14	+1.3
1,084,402	+		Echvi_0939	0.23	+0.5
1,084,403	-		Echvi_0939	0.23	-0.1
1,084,591	-		Echvi_0939	0.38	-0.7
1,084,662	-		Echvi_0939	0.44	-0.3
1,084,662	-		Echvi_0939	0.44	-0.4
1,084,693	-		Echvi_0939	0.47	-0.3
1,084,784	-		Echvi_0939	0.54	-0.8
1,084,889	+		Echvi_0939	0.63	+0.6
1,084,889	+		Echvi_0939	0.63	-0.6
1,084,890	-		Echvi_0939	0.63	-1.1
1,084,924	+		Echvi_0939	0.66	-0.5
1,084,924	+		Echvi_0939	0.66	-0.8
1,084,925	-		Echvi_0939	0.66	+0.2
1,084,976	+		Echvi_0939	0.70	+1.1
1,084,976	+		Echvi_0939	0.70	-0.7
1,085,035	+		Echvi_0939	0.75	-0.3
1,085,036	-		Echvi_0939	0.75	-0.9
1,085,043	+		Echvi_0939	0.76	-0.9
1,085,122	+		Echvi_0939	0.83	+1.0
1,085,124	+		Echvi_0939	0.83	+0.9
1,085,125	-		Echvi_0939	0.83	-0.1
1,085,205	+		Echvi_0939	0.89	+0.6
1,085,210	-		Echvi_0939	0.90	-0.2
1,085,210	-		Echvi_0939	0.90	+0.8
1,085,210	-		Echvi_0939	0.90	-0.7
1,085,210	-		Echvi_0939	0.90	-0.4
1,085,329	+				-1.7
1,085,329	+				+0.3
1,085,330	-				+0.2
1,085,358	+				+0.7
1,085,370	+				-1.4
1,085,370	+				+0.5
1,085,370	+				-1.2
1,085,371	-				-2.0
1,085,381	+				+1.3
1,085,382	-				+1.9
1,085,382	-				-0.3
1,085,388	+				+1.1
1,085,395	-				-0.7
1,085,395	-				-0.6
1,085,413	+				-3.5
1,085,427	+				+0.1
1,085,454	+				-0.9
1,085,542	+		Echvi_0940	0.13	-3.2
1,085,542	+		Echvi_0940	0.13	-1.5
1,085,552	-		Echvi_0940	0.14	-1.3
1,085,603	-		Echvi_0940	0.19	-0.6
1,085,638	-		Echvi_0940	0.22	+0.5
1,085,638	-		Echvi_0940	0.22	-1.2
1,085,676	+		Echvi_0940	0.25	-0.4
1,085,677	-		Echvi_0940	0.25	-0.9
1,085,677	-		Echvi_0940	0.25	-1.1
1,085,694	+		Echvi_0940	0.27	-0.7
1,085,745	+		Echvi_0940	0.31	-0.2
1,085,745	+		Echvi_0940	0.31	-1.0
1,085,745	+		Echvi_0940	0.31	-1.5
1,085,746	-		Echvi_0940	0.32	-0.9
1,085,746	-		Echvi_0940	0.32	-1.1
1,085,746	-		Echvi_0940	0.32	-1.1
1,085,746	-		Echvi_0940	0.32	-0.7
1,085,808	+		Echvi_0940	0.37	-1.0
1,085,809	-		Echvi_0940	0.37	-0.4
1,085,822	+		Echvi_0940	0.38	-1.1
1,085,823	-		Echvi_0940	0.38	-0.1
1,085,823	-		Echvi_0940	0.38	-0.3
1,085,823	-		Echvi_0940	0.38	-1.3
1,085,842	+		Echvi_0940	0.40	-0.9
1,085,916	+		Echvi_0940	0.47	-0.8
1,085,917	-		Echvi_0940	0.47	-0.5
1,085,919	+		Echvi_0940	0.47	-0.9
1,085,919	+		Echvi_0940	0.47	-2.9
1,085,919	+		Echvi_0940	0.47	-1.6
1,085,920	-		Echvi_0940	0.47	-0.8
1,086,105	+		Echvi_0940	0.64	-1.5
1,086,105	+		Echvi_0940	0.64	-2.1
1,086,106	-		Echvi_0940	0.64	-0.6
1,086,106	-		Echvi_0940	0.64	-0.8
1,086,176	-		Echvi_0940	0.70	-1.2
1,086,176	-		Echvi_0940	0.70	+1.6
1,086,293	-		Echvi_0940	0.80	-1.7
1,086,319	+		Echvi_0940	0.83	-1.3
1,086,320	-		Echvi_0940	0.83	-2.6
1,086,320	-		Echvi_0940	0.83	+0.0
1,086,320	-		Echvi_0940	0.83	-2.0
1,086,321	+		Echvi_0940	0.83	-1.5
1,086,321	+		Echvi_0940	0.83	-1.4
1,086,321	+		Echvi_0940	0.83	-0.4
1,086,322	-		Echvi_0940	0.83	-1.2