Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0812

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
930,786	+		Echvi_0811	0.58	-0.0
930,807	+		Echvi_0811	0.59	+0.5
930,807	+		Echvi_0811	0.59	+0.8
930,807	+		Echvi_0811	0.59	+0.4
930,807	+		Echvi_0811	0.59	-0.4
930,808	-		Echvi_0811	0.59	-1.3
930,808	-		Echvi_0811	0.59	+2.3
930,997	-		Echvi_0811	0.69	-1.4
930,997	-		Echvi_0811	0.69	-0.5
931,058	+		Echvi_0811	0.72	+1.1
931,058	+		Echvi_0811	0.72	+0.5
931,059	-		Echvi_0811	0.72	+0.0
931,125	-		Echvi_0811	0.75	-0.5
931,151	-		Echvi_0811	0.77	+0.3
931,151	-		Echvi_0811	0.77	+0.9
931,179	+		Echvi_0811	0.78	+0.5
931,179	+		Echvi_0811	0.78	+1.5
931,214	+		Echvi_0811	0.80	-1.3
931,214	+		Echvi_0811	0.80	+1.3
931,215	-		Echvi_0811	0.80	+0.1
931,220	+		Echvi_0811	0.80	-1.4
931,257	+		Echvi_0811	0.82	+1.7
931,257	+		Echvi_0811	0.82	+0.5
931,257	+		Echvi_0811	0.82	-0.2
931,258	-		Echvi_0811	0.82	-1.2
931,258	-		Echvi_0811	0.82	-1.9
931,258	-		Echvi_0811	0.82	+0.2
931,258	-		Echvi_0811	0.82	+0.4
931,258	-		Echvi_0811	0.82	+0.0
931,258	-		Echvi_0811	0.82	-0.5
931,258	-		Echvi_0811	0.82	-0.7
931,258	-		Echvi_0811	0.82	+1.8
931,258	-		Echvi_0811	0.82	-0.5
931,259	+		Echvi_0811	0.82	+0.7
931,259	+		Echvi_0811	0.82	+0.2
931,259	+		Echvi_0811	0.82	+0.1
931,260	-		Echvi_0811	0.82	-1.0
931,313	+		Echvi_0811	0.85	-0.5
931,344	+		Echvi_0811	0.87	-0.7
931,404	-		Echvi_0811	0.90	-0.0
931,455	+				+1.6
931,455	+				+0.2
931,571	-				-0.5
931,643	+				-1.5
931,644	-				-1.4
931,644	-				+1.9
931,644	-				-0.7
931,644	-				-0.5
931,764	+				+0.1
931,765	-				-0.2
931,769	+				-0.2
931,883	+		Echvi_0812	0.26	-0.2
931,883	+		Echvi_0812	0.26	+1.1
931,883	+		Echvi_0812	0.26	-0.9
931,895	-		Echvi_0812	0.28	-1.5
931,895	-		Echvi_0812	0.28	-0.2
931,916	+		Echvi_0812	0.31	+0.0
931,916	+		Echvi_0812	0.31	+1.2
931,917	-		Echvi_0812	0.31	-1.3
931,917	-		Echvi_0812	0.31	-0.5
932,008	-		Echvi_0812	0.45	-0.7
932,036	+		Echvi_0812	0.50	+0.4
932,036	+		Echvi_0812	0.50	+1.8
932,037	-		Echvi_0812	0.50	-1.7
932,085	+		Echvi_0812	0.57	-1.6
932,135	+		Echvi_0812	0.65	-0.6
932,135	+		Echvi_0812	0.65	+0.5
932,135	+		Echvi_0812	0.65	-0.5
932,136	-		Echvi_0812	0.65	-0.2
932,136	-		Echvi_0812	0.65	-2.2
932,136	-		Echvi_0812	0.65	-1.3
932,136	-		Echvi_0812	0.65	-0.0
932,136	-		Echvi_0812	0.65	-1.0
932,173	+		Echvi_0812	0.71	+0.7
932,174	-		Echvi_0812	0.71	-0.1
932,344	+				-0.3
932,345	-				-0.9
932,345	-				+0.2
932,345	-				+0.4
932,364	-				-0.3
932,364	-				-0.7
932,371	+				+0.4
932,428	+				-0.0
932,478	+		Echvi_0813	0.23	+0.2
932,478	+		Echvi_0813	0.23	+1.0
932,484	-		Echvi_0813	0.26	-1.5
932,607	+		Echvi_0813	0.81	+0.5
932,608	-		Echvi_0813	0.82	+0.9
932,629	-				+0.6