Experiment: m.b. Carbenicillin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0714 and Echvi_0715 are separated by 37 nucleotides Echvi_0715 and Echvi_0716 overlap by 4 nucleotides
Echvi_0714: Echvi_0714 - hypothetical protein, at 806,038 to 808,056
_0714
Echvi_0715: Echvi_0715 - hypothetical protein, at 808,094 to 808,264
_0715
Echvi_0716: Echvi_0716 - Asparaginase, at 808,261 to 809,349
_0716
Position (kb) 808
809 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 807.164 kb on + strand, within Echvi_0714 at 807.164 kb on + strand, within Echvi_0714 at 807.165 kb on - strand, within Echvi_0714 at 807.281 kb on + strand, within Echvi_0714 at 807.282 kb on - strand, within Echvi_0714 at 807.291 kb on + strand, within Echvi_0714 at 807.291 kb on + strand, within Echvi_0714 at 807.292 kb on - strand, within Echvi_0714 at 807.301 kb on + strand, within Echvi_0714 at 807.301 kb on + strand, within Echvi_0714 at 807.301 kb on + strand, within Echvi_0714 at 807.301 kb on + strand, within Echvi_0714 at 807.301 kb on + strand, within Echvi_0714 at 807.301 kb on + strand, within Echvi_0714 at 807.301 kb on + strand, within Echvi_0714 at 807.302 kb on - strand, within Echvi_0714 at 807.302 kb on - strand, within Echvi_0714 at 807.302 kb on - strand, within Echvi_0714 at 807.302 kb on - strand, within Echvi_0714 at 807.302 kb on - strand, within Echvi_0714 at 807.302 kb on - strand, within Echvi_0714 at 807.302 kb on - strand, within Echvi_0714 at 807.302 kb on - strand, within Echvi_0714 at 807.302 kb on - strand, within Echvi_0714 at 807.302 kb on - strand, within Echvi_0714 at 807.302 kb on - strand, within Echvi_0714 at 807.303 kb on + strand, within Echvi_0714 at 807.304 kb on - strand, within Echvi_0714 at 807.304 kb on - strand, within Echvi_0714 at 807.312 kb on + strand, within Echvi_0714 at 807.312 kb on + strand, within Echvi_0714 at 807.312 kb on + strand, within Echvi_0714 at 807.313 kb on - strand, within Echvi_0714 at 807.333 kb on + strand, within Echvi_0714 at 807.434 kb on + strand, within Echvi_0714 at 807.435 kb on - strand, within Echvi_0714 at 807.750 kb on + strand, within Echvi_0714 at 807.853 kb on + strand, within Echvi_0714 at 807.920 kb on - strand at 808.034 kb on + strand at 808.045 kb on - strand at 808.061 kb on + strand at 808.063 kb on + strand at 808.063 kb on + strand at 808.064 kb on - strand at 808.087 kb on - strand at 808.130 kb on + strand, within Echvi_0715 at 808.130 kb on + strand, within Echvi_0715 at 808.184 kb on + strand, within Echvi_0715 at 808.286 kb on + strand at 808.287 kb on - strand at 808.322 kb on + strand at 808.323 kb on - strand at 808.374 kb on + strand, within Echvi_0716 at 808.374 kb on + strand, within Echvi_0716 at 808.458 kb on + strand, within Echvi_0716 at 808.459 kb on - strand, within Echvi_0716 at 808.459 kb on - strand, within Echvi_0716 at 808.459 kb on - strand, within Echvi_0716 at 808.466 kb on + strand, within Echvi_0716 at 808.484 kb on - strand, within Echvi_0716 at 808.586 kb on - strand, within Echvi_0716 at 808.688 kb on + strand, within Echvi_0716 at 808.702 kb on - strand, within Echvi_0716 at 808.702 kb on - strand, within Echvi_0716 at 808.791 kb on - strand, within Echvi_0716 at 808.811 kb on + strand, within Echvi_0716 at 808.894 kb on + strand, within Echvi_0716 at 808.901 kb on - strand, within Echvi_0716 at 808.901 kb on - strand, within Echvi_0716 at 808.907 kb on + strand, within Echvi_0716 at 808.908 kb on - strand, within Echvi_0716 at 808.908 kb on - strand, within Echvi_0716 at 808.918 kb on - strand, within Echvi_0716 at 808.930 kb on - strand, within Echvi_0716 at 809.120 kb on + strand, within Echvi_0716 at 809.120 kb on + strand, within Echvi_0716 at 809.121 kb on - strand, within Echvi_0716 at 809.121 kb on - strand, within Echvi_0716 at 809.121 kb on - strand, within Echvi_0716 at 809.144 kb on - strand, within Echvi_0716 at 809.199 kb on + strand, within Echvi_0716
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.2 mg/ml remove 807,164 + Echvi_0714 0.56 +0.9 807,164 + Echvi_0714 0.56 -1.0 807,165 - Echvi_0714 0.56 +1.3 807,281 + Echvi_0714 0.62 -1.1 807,282 - Echvi_0714 0.62 -0.9 807,291 + Echvi_0714 0.62 +1.3 807,291 + Echvi_0714 0.62 -0.3 807,292 - Echvi_0714 0.62 -0.1 807,301 + Echvi_0714 0.63 -0.0 807,301 + Echvi_0714 0.63 -0.2 807,301 + Echvi_0714 0.63 -1.3 807,301 + Echvi_0714 0.63 -0.5 807,301 + Echvi_0714 0.63 +0.5 807,301 + Echvi_0714 0.63 -0.5 807,301 + Echvi_0714 0.63 -0.1 807,302 - Echvi_0714 0.63 -2.1 807,302 - Echvi_0714 0.63 +0.3 807,302 - Echvi_0714 0.63 +0.5 807,302 - Echvi_0714 0.63 +0.8 807,302 - Echvi_0714 0.63 +0.2 807,302 - Echvi_0714 0.63 -1.3 807,302 - Echvi_0714 0.63 +0.9 807,302 - Echvi_0714 0.63 +0.8 807,302 - Echvi_0714 0.63 +1.1 807,302 - Echvi_0714 0.63 +0.7 807,302 - Echvi_0714 0.63 +0.6 807,303 + Echvi_0714 0.63 +0.1 807,304 - Echvi_0714 0.63 -1.4 807,304 - Echvi_0714 0.63 +0.2 807,312 + Echvi_0714 0.63 +0.6 807,312 + Echvi_0714 0.63 +0.4 807,312 + Echvi_0714 0.63 +0.4 807,313 - Echvi_0714 0.63 -0.4 807,333 + Echvi_0714 0.64 -1.2 807,434 + Echvi_0714 0.69 +0.0 807,435 - Echvi_0714 0.69 -1.5 807,750 + Echvi_0714 0.85 -0.8 807,853 + Echvi_0714 0.90 -0.9 807,920 - +0.3 808,034 + -1.2 808,045 - +0.1 808,061 + -1.7 808,063 + +0.2 808,063 + -0.8 808,064 - -0.0 808,087 - +1.3 808,130 + Echvi_0715 0.21 -0.8 808,130 + Echvi_0715 0.21 -0.4 808,184 + Echvi_0715 0.53 -2.0 808,286 + +0.0 808,287 - -0.6 808,322 + -0.2 808,323 - -0.0 808,374 + Echvi_0716 0.10 +0.4 808,374 + Echvi_0716 0.10 -0.9 808,458 + Echvi_0716 0.18 -0.7 808,459 - Echvi_0716 0.18 -0.1 808,459 - Echvi_0716 0.18 -0.1 808,459 - Echvi_0716 0.18 +1.4 808,466 + Echvi_0716 0.19 -0.5 808,484 - Echvi_0716 0.20 +0.5 808,586 - Echvi_0716 0.30 +0.5 808,688 + Echvi_0716 0.39 -0.5 808,702 - Echvi_0716 0.40 -1.3 808,702 - Echvi_0716 0.40 -0.5 808,791 - Echvi_0716 0.49 -1.5 808,811 + Echvi_0716 0.51 +2.8 808,894 + Echvi_0716 0.58 -0.7 808,901 - Echvi_0716 0.59 +0.6 808,901 - Echvi_0716 0.59 +0.0 808,907 + Echvi_0716 0.59 +0.7 808,908 - Echvi_0716 0.59 -0.1 808,908 - Echvi_0716 0.59 +1.6 808,918 - Echvi_0716 0.60 +0.9 808,930 - Echvi_0716 0.61 -0.1 809,120 + Echvi_0716 0.79 +1.0 809,120 + Echvi_0716 0.79 +2.5 809,121 - Echvi_0716 0.79 +0.5 809,121 - Echvi_0716 0.79 +0.1 809,121 - Echvi_0716 0.79 +4.5 809,144 - Echvi_0716 0.81 -0.1 809,199 + Echvi_0716 0.86 +0.9
Or see this region's nucleotide sequence