Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0688

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
777,607	+				-1.0
777,654	+				-1.5
777,655	-				-0.1
777,655	-				+0.2
777,721	+		Echvi_0688	0.15	+0.4
777,722	-		Echvi_0688	0.15	-0.2
777,722	-		Echvi_0688	0.15	-0.7
777,732	+		Echvi_0688	0.17	+0.0
777,733	-		Echvi_0688	0.17	+1.2
777,733	-		Echvi_0688	0.17	-2.1
777,782	+				+1.2
777,830	-		Echvi_0688	0.38	-1.9
777,831	+		Echvi_0688	0.38	-3.3
777,831	+		Echvi_0688	0.38	-2.1
777,831	+		Echvi_0688	0.38	+0.4
777,832	-		Echvi_0688	0.38	-1.5
777,832	-		Echvi_0688	0.38	-0.1
777,832	-		Echvi_0688	0.38	-0.5
777,865	+		Echvi_0688	0.46	-1.7
777,910	+		Echvi_0688	0.55	+1.4
777,910	+		Echvi_0688	0.55	-0.2
777,956	-		Echvi_0688	0.65	-0.4
778,101	-				+0.5
778,108	-				-0.9
778,111	+				-2.5
778,112	-				-0.4
778,117	+				-1.6
778,117	+				-1.2
778,118	-				-0.6
778,139	+				-0.9
778,150	-				+0.4
778,196	+				+1.2
778,322	+				+1.0
778,346	+				-0.2
778,346	+				-0.2
778,416	+				+0.1
778,460	-				+2.0
778,464	-				+0.5
778,535	-				-1.6
778,535	-				-0.3
778,536	+				+0.5
778,536	+				+0.5
778,537	-				-0.5
778,537	-				+0.1
778,566	+				-0.2
778,566	+				-1.2
778,566	+				+0.8
778,568	+				+1.5
778,569	-				+0.6
778,569	-				+0.7
778,569	-				-1.9
778,569	-				+0.3
778,570	+				-2.5
778,570	+				+0.7
778,570	+				-0.7
778,570	+				-0.6
778,571	-				-1.9
778,571	-				+0.7
778,571	-				+0.1
778,592	+				-0.1
778,593	-				-1.0
778,593	-				-1.3
778,593	-				-0.2
778,593	-				+0.4
778,594	+				+1.1
778,594	+				+0.6
778,594	+				+0.3
778,594	+				-0.3
778,594	+				+0.6
778,594	+				-1.4
778,595	-				+0.3
778,595	-				+0.9
778,627	+				-0.0
778,627	+				+0.3
778,628	-				+1.1
778,628	-				-1.3
778,633	+				+0.6
778,651	+				+0.6
778,652	-				+2.2
778,660	-				-0.2
778,660	-				-0.0
778,691	+				+0.4
778,722	+				-1.0
778,723	-				+0.8
778,724	+				-0.3
778,724	+				+0.3
778,725	-				+0.1
778,732	+				+0.2
778,747	+				+1.7
778,747	+				-0.8
778,753	+				-2.1
778,754	-				+0.6
778,754	-				-0.5
778,788	-				+1.5
778,805	+				+1.2
778,900	+				-0.1
778,900	+				-0.4
778,953	-		Echvi_0690	0.14	-0.0
778,956	-		Echvi_0690	0.15	+0.3
778,978	+		Echvi_0690	0.21	-1.8
778,978	+		Echvi_0690	0.21	+1.7
779,051	+		Echvi_0690	0.41	-0.6
779,052	-		Echvi_0690	0.41	+0.7
779,055	+		Echvi_0690	0.42	-0.1
779,055	+		Echvi_0690	0.42	+0.0
779,056	-		Echvi_0690	0.42	+0.6
779,084	+		Echvi_0690	0.49	+0.4
779,085	-		Echvi_0690	0.50	-0.5
779,085	-		Echvi_0690	0.50	+0.7
779,088	-		Echvi_0690	0.50	-1.4