Experiment: m.b. Carbenicillin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0464 and Echvi_0465 are separated by 333 nucleotides Echvi_0465 and Echvi_0466 overlap by 17 nucleotides Echvi_0466 and Echvi_0467 are separated by 112 nucleotides
Echvi_0464: Echvi_0464 - Protein of unknown function (DUF2726)., at 508,718 to 509,575
_0464
Echvi_0465: Echvi_0465 - hypothetical protein, at 509,909 to 511,240
_0465
Echvi_0466: Echvi_0466 - hypothetical protein, at 511,224 to 511,928
_0466
Echvi_0467: Echvi_0467 - hypothetical protein, at 512,041 to 512,457
_0467
Position (kb) 509
510
511
512 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 508.955 kb on + strand, within Echvi_0464 at 508.995 kb on - strand, within Echvi_0464 at 508.995 kb on - strand, within Echvi_0464 at 508.995 kb on - strand, within Echvi_0464 at 508.995 kb on - strand, within Echvi_0464 at 509.026 kb on + strand, within Echvi_0464 at 509.026 kb on + strand, within Echvi_0464 at 509.026 kb on + strand, within Echvi_0464 at 509.026 kb on + strand, within Echvi_0464 at 509.027 kb on - strand, within Echvi_0464 at 509.069 kb on + strand, within Echvi_0464 at 509.078 kb on + strand, within Echvi_0464 at 509.140 kb on - strand, within Echvi_0464 at 509.144 kb on + strand, within Echvi_0464 at 509.145 kb on - strand, within Echvi_0464 at 509.195 kb on - strand, within Echvi_0464 at 509.221 kb on - strand, within Echvi_0464 at 509.225 kb on + strand, within Echvi_0464 at 509.243 kb on + strand, within Echvi_0464 at 509.244 kb on - strand, within Echvi_0464 at 509.259 kb on + strand, within Echvi_0464 at 509.263 kb on - strand, within Echvi_0464 at 509.271 kb on + strand, within Echvi_0464 at 509.271 kb on + strand, within Echvi_0464 at 509.271 kb on + strand, within Echvi_0464 at 509.272 kb on - strand, within Echvi_0464 at 509.272 kb on - strand, within Echvi_0464 at 509.275 kb on + strand, within Echvi_0464 at 509.275 kb on + strand, within Echvi_0464 at 509.275 kb on + strand, within Echvi_0464 at 509.275 kb on + strand, within Echvi_0464 at 509.276 kb on - strand, within Echvi_0464 at 509.366 kb on + strand, within Echvi_0464 at 509.422 kb on + strand, within Echvi_0464 at 509.429 kb on + strand, within Echvi_0464 at 509.434 kb on + strand, within Echvi_0464 at 509.434 kb on + strand, within Echvi_0464 at 509.450 kb on - strand, within Echvi_0464 at 509.489 kb on - strand, within Echvi_0464 at 509.503 kb on - strand at 509.506 kb on - strand at 509.506 kb on - strand at 509.554 kb on - strand at 509.554 kb on - strand at 509.582 kb on - strand at 509.587 kb on + strand at 509.624 kb on + strand at 509.624 kb on + strand at 509.632 kb on + strand at 509.644 kb on + strand at 509.675 kb on + strand at 509.688 kb on + strand at 509.688 kb on + strand at 509.713 kb on + strand at 509.960 kb on - strand at 510.008 kb on + strand at 510.011 kb on - strand at 510.032 kb on + strand at 510.033 kb on - strand at 510.033 kb on - strand at 510.065 kb on + strand, within Echvi_0465 at 510.066 kb on - strand, within Echvi_0465 at 510.109 kb on - strand, within Echvi_0465 at 510.133 kb on + strand, within Echvi_0465 at 510.134 kb on - strand, within Echvi_0465 at 510.185 kb on - strand, within Echvi_0465 at 510.185 kb on - strand, within Echvi_0465 at 510.206 kb on - strand, within Echvi_0465 at 510.257 kb on - strand, within Echvi_0465 at 510.257 kb on - strand, within Echvi_0465 at 510.257 kb on - strand, within Echvi_0465 at 510.257 kb on - strand, within Echvi_0465 at 510.257 kb on - strand, within Echvi_0465 at 510.306 kb on - strand, within Echvi_0465 at 510.383 kb on - strand, within Echvi_0465 at 510.436 kb on - strand, within Echvi_0465 at 510.436 kb on - strand, within Echvi_0465 at 510.464 kb on - strand, within Echvi_0465 at 510.464 kb on - strand, within Echvi_0465 at 510.545 kb on - strand, within Echvi_0465 at 510.550 kb on - strand, within Echvi_0465 at 510.554 kb on - strand, within Echvi_0465 at 510.613 kb on - strand, within Echvi_0465 at 510.640 kb on - strand, within Echvi_0465 at 510.752 kb on - strand, within Echvi_0465 at 510.759 kb on - strand, within Echvi_0465 at 510.879 kb on - strand, within Echvi_0465 at 510.879 kb on - strand, within Echvi_0465 at 510.879 kb on - strand, within Echvi_0465 at 510.879 kb on - strand, within Echvi_0465 at 510.995 kb on - strand, within Echvi_0465 at 510.995 kb on - strand, within Echvi_0465 at 511.007 kb on - strand, within Echvi_0465 at 511.007 kb on - strand, within Echvi_0465 at 511.007 kb on - strand, within Echvi_0465 at 511.084 kb on - strand, within Echvi_0465 at 511.086 kb on - strand, within Echvi_0465 at 511.086 kb on - strand, within Echvi_0465 at 511.112 kb on - strand at 511.112 kb on - strand at 511.112 kb on - strand at 511.146 kb on - strand at 511.146 kb on - strand at 511.161 kb on - strand at 511.161 kb on - strand at 511.176 kb on - strand at 511.176 kb on - strand at 511.199 kb on - strand at 511.295 kb on + strand, within Echvi_0466 at 511.310 kb on + strand, within Echvi_0466 at 511.311 kb on - strand, within Echvi_0466 at 511.311 kb on - strand, within Echvi_0466 at 511.311 kb on - strand, within Echvi_0466 at 511.349 kb on + strand, within Echvi_0466 at 511.350 kb on - strand, within Echvi_0466 at 511.354 kb on + strand, within Echvi_0466 at 511.354 kb on + strand, within Echvi_0466 at 511.354 kb on + strand, within Echvi_0466 at 511.355 kb on - strand, within Echvi_0466 at 511.355 kb on - strand, within Echvi_0466 at 511.358 kb on - strand, within Echvi_0466 at 511.358 kb on - strand, within Echvi_0466 at 511.358 kb on - strand, within Echvi_0466 at 511.361 kb on - strand, within Echvi_0466 at 511.407 kb on - strand, within Echvi_0466 at 511.412 kb on - strand, within Echvi_0466 at 511.447 kb on - strand, within Echvi_0466 at 511.447 kb on - strand, within Echvi_0466 at 511.451 kb on + strand, within Echvi_0466 at 511.451 kb on + strand, within Echvi_0466 at 511.451 kb on + strand, within Echvi_0466 at 511.452 kb on - strand, within Echvi_0466 at 511.465 kb on + strand, within Echvi_0466 at 511.511 kb on - strand, within Echvi_0466 at 511.511 kb on - strand, within Echvi_0466 at 511.553 kb on + strand, within Echvi_0466 at 511.554 kb on - strand, within Echvi_0466 at 511.677 kb on + strand, within Echvi_0466 at 511.677 kb on + strand, within Echvi_0466 at 511.677 kb on + strand, within Echvi_0466 at 511.677 kb on + strand, within Echvi_0466 at 511.678 kb on - strand, within Echvi_0466 at 511.723 kb on - strand, within Echvi_0466 at 511.723 kb on - strand, within Echvi_0466 at 511.723 kb on - strand, within Echvi_0466 at 511.747 kb on + strand, within Echvi_0466 at 511.797 kb on - strand, within Echvi_0466 at 511.803 kb on - strand, within Echvi_0466 at 511.803 kb on - strand, within Echvi_0466 at 511.913 kb on - strand at 511.913 kb on - strand at 511.926 kb on + strand at 511.927 kb on - strand at 511.927 kb on - strand at 511.940 kb on + strand at 511.940 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.987 kb on + strand at 511.991 kb on + strand at 511.991 kb on + strand at 511.991 kb on + strand at 512.011 kb on + strand at 512.038 kb on + strand at 512.070 kb on + strand at 512.079 kb on + strand at 512.089 kb on - strand, within Echvi_0467 at 512.124 kb on + strand, within Echvi_0467 at 512.179 kb on - strand, within Echvi_0467 at 512.179 kb on - strand, within Echvi_0467 at 512.182 kb on - strand, within Echvi_0467 at 512.182 kb on - strand, within Echvi_0467
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.2 mg/ml remove 508,955 + Echvi_0464 0.28 -0.1 508,995 - Echvi_0464 0.32 +0.5 508,995 - Echvi_0464 0.32 -1.3 508,995 - Echvi_0464 0.32 +0.0 508,995 - Echvi_0464 0.32 +0.8 509,026 + Echvi_0464 0.36 +0.8 509,026 + Echvi_0464 0.36 -0.2 509,026 + Echvi_0464 0.36 -1.0 509,026 + Echvi_0464 0.36 +0.8 509,027 - Echvi_0464 0.36 -0.3 509,069 + Echvi_0464 0.41 -1.4 509,078 + Echvi_0464 0.42 -0.1 509,140 - Echvi_0464 0.49 +0.5 509,144 + Echvi_0464 0.50 +2.1 509,145 - Echvi_0464 0.50 -1.0 509,195 - Echvi_0464 0.56 +0.4 509,221 - Echvi_0464 0.59 -0.5 509,225 + Echvi_0464 0.59 -1.1 509,243 + Echvi_0464 0.61 -1.4 509,244 - Echvi_0464 0.61 -0.5 509,259 + Echvi_0464 0.63 -1.5 509,263 - Echvi_0464 0.64 +1.4 509,271 + Echvi_0464 0.64 -1.5 509,271 + Echvi_0464 0.64 -0.1 509,271 + Echvi_0464 0.64 -0.5 509,272 - Echvi_0464 0.65 +0.5 509,272 - Echvi_0464 0.65 -2.0 509,275 + Echvi_0464 0.65 +0.1 509,275 + Echvi_0464 0.65 +0.0 509,275 + Echvi_0464 0.65 +1.1 509,275 + Echvi_0464 0.65 -1.1 509,276 - Echvi_0464 0.65 +0.8 509,366 + Echvi_0464 0.76 +0.4 509,422 + Echvi_0464 0.82 -0.2 509,429 + Echvi_0464 0.83 +0.7 509,434 + Echvi_0464 0.83 -0.2 509,434 + Echvi_0464 0.83 +1.4 509,450 - Echvi_0464 0.85 -0.3 509,489 - Echvi_0464 0.90 -0.9 509,503 - -0.5 509,506 - -0.6 509,506 - +1.7 509,554 - +0.6 509,554 - -0.8 509,582 - -1.2 509,587 + +0.6 509,624 + +0.4 509,624 + +0.1 509,632 + -0.7 509,644 + +0.6 509,675 + +0.9 509,688 + +0.3 509,688 + -1.0 509,713 + -0.2 509,960 - +0.5 510,008 + -1.6 510,011 - +0.9 510,032 + +0.4 510,033 - -0.2 510,033 - -1.7 510,065 + Echvi_0465 0.12 +2.7 510,066 - Echvi_0465 0.12 +0.2 510,109 - Echvi_0465 0.15 -1.9 510,133 + Echvi_0465 0.17 -1.0 510,134 - Echvi_0465 0.17 -1.8 510,185 - Echvi_0465 0.21 +0.8 510,185 - Echvi_0465 0.21 -1.0 510,206 - Echvi_0465 0.22 -0.3 510,257 - Echvi_0465 0.26 +1.5 510,257 - Echvi_0465 0.26 +0.0 510,257 - Echvi_0465 0.26 +0.8 510,257 - Echvi_0465 0.26 -0.2 510,257 - Echvi_0465 0.26 -1.6 510,306 - Echvi_0465 0.30 +0.1 510,383 - Echvi_0465 0.36 -1.2 510,436 - Echvi_0465 0.40 -1.5 510,436 - Echvi_0465 0.40 -1.2 510,464 - Echvi_0465 0.42 -0.7 510,464 - Echvi_0465 0.42 -2.0 510,545 - Echvi_0465 0.48 -1.9 510,550 - Echvi_0465 0.48 -0.5 510,554 - Echvi_0465 0.48 -1.9 510,613 - Echvi_0465 0.53 -1.6 510,640 - Echvi_0465 0.55 -1.6 510,752 - Echvi_0465 0.63 -0.2 510,759 - Echvi_0465 0.64 -0.6 510,879 - Echvi_0465 0.73 -0.6 510,879 - Echvi_0465 0.73 +1.3 510,879 - Echvi_0465 0.73 +1.1 510,879 - Echvi_0465 0.73 -0.6 510,995 - Echvi_0465 0.82 -0.2 510,995 - Echvi_0465 0.82 -0.1 511,007 - Echvi_0465 0.82 -0.3 511,007 - Echvi_0465 0.82 +1.0 511,007 - Echvi_0465 0.82 +0.4 511,084 - Echvi_0465 0.88 +0.5 511,086 - Echvi_0465 0.88 +0.1 511,086 - Echvi_0465 0.88 -1.3 511,112 - +0.7 511,112 - +0.9 511,112 - +1.5 511,146 - -0.5 511,146 - -0.6 511,161 - -0.5 511,161 - +0.9 511,176 - -0.6 511,176 - +0.8 511,199 - -0.6 511,295 + Echvi_0466 0.10 +0.2 511,310 + Echvi_0466 0.12 +0.4 511,311 - Echvi_0466 0.12 -1.7 511,311 - Echvi_0466 0.12 +0.3 511,311 - Echvi_0466 0.12 -0.8 511,349 + Echvi_0466 0.18 -2.5 511,350 - Echvi_0466 0.18 +2.5 511,354 + Echvi_0466 0.18 +0.0 511,354 + Echvi_0466 0.18 +0.2 511,354 + Echvi_0466 0.18 -0.3 511,355 - Echvi_0466 0.19 -0.1 511,355 - Echvi_0466 0.19 +1.1 511,358 - Echvi_0466 0.19 -0.5 511,358 - Echvi_0466 0.19 +1.5 511,358 - Echvi_0466 0.19 -2.4 511,361 - Echvi_0466 0.19 -0.5 511,407 - Echvi_0466 0.26 +3.7 511,412 - Echvi_0466 0.27 -0.7 511,447 - Echvi_0466 0.32 -0.2 511,447 - Echvi_0466 0.32 -1.0 511,451 + Echvi_0466 0.32 -1.0 511,451 + Echvi_0466 0.32 +2.7 511,451 + Echvi_0466 0.32 -0.4 511,452 - Echvi_0466 0.32 -0.9 511,465 + Echvi_0466 0.34 +0.4 511,511 - Echvi_0466 0.41 -0.4 511,511 - Echvi_0466 0.41 +0.1 511,553 + Echvi_0466 0.47 +0.0 511,554 - Echvi_0466 0.47 +2.0 511,677 + Echvi_0466 0.64 +1.5 511,677 + Echvi_0466 0.64 +0.4 511,677 + Echvi_0466 0.64 -0.7 511,677 + Echvi_0466 0.64 +0.7 511,678 - Echvi_0466 0.64 -1.1 511,723 - Echvi_0466 0.71 -2.6 511,723 - Echvi_0466 0.71 -1.2 511,723 - Echvi_0466 0.71 +1.5 511,747 + Echvi_0466 0.74 +1.1 511,797 - Echvi_0466 0.81 -0.2 511,803 - Echvi_0466 0.82 +1.7 511,803 - Echvi_0466 0.82 -1.0 511,913 - +1.7 511,913 - +0.1 511,926 + +0.2 511,927 - -1.3 511,927 - -0.1 511,940 + +0.3 511,940 + +1.1 511,983 + -0.9 511,983 + -0.0 511,983 + -0.5 511,983 + +0.7 511,983 + -1.5 511,983 + -2.2 511,983 + -1.7 511,984 - +0.4 511,984 - -1.0 511,984 - +0.5 511,984 - -3.2 511,984 - -1.1 511,984 - +0.1 511,987 + -1.3 511,991 + -0.6 511,991 + -0.1 511,991 + -1.0 512,011 + -0.0 512,038 + -1.1 512,070 + +1.1 512,079 + +0.7 512,089 - Echvi_0467 0.12 +0.2 512,124 + Echvi_0467 0.20 +0.1 512,179 - Echvi_0467 0.33 -2.0 512,179 - Echvi_0467 0.33 -0.8 512,182 - Echvi_0467 0.34 -0.1 512,182 - Echvi_0467 0.34 +0.7
Or see this region's nucleotide sequence