Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0440

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
477,727	-		Echvi_0437	0.62	+0.4
477,727	-		Echvi_0437	0.62	+0.1
477,806	+		Echvi_0437	0.71	-0.6
477,806	+		Echvi_0437	0.71	-0.5
477,876	-		Echvi_0437	0.79	+0.1
477,901	+		Echvi_0437	0.82	-2.6
477,901	+		Echvi_0437	0.82	-1.8
478,059	+				-0.3
478,060	-				-0.5
478,095	+				+0.6
478,096	-				+0.3
478,099	-				-0.8
478,132	-		Echvi_0438	0.24	-1.0
478,163	+		Echvi_0438	0.42	-0.7
478,164	-		Echvi_0438	0.43	-0.7
478,172	+		Echvi_0438	0.47	+0.0
478,172	+		Echvi_0438	0.47	-0.6
478,523	+				+0.1
478,523	+				-0.2
478,573	+				-1.6
478,648	+				+1.6
478,648	+				-1.7
478,720	-				-0.5
478,751	-		Echvi_0440	0.11	-2.1
478,784	+		Echvi_0440	0.18	-1.5
478,784	+		Echvi_0440	0.18	-2.2
479,447	-				+0.1
479,475	+				+0.4
479,475	+				-2.0
479,475	+				+1.3
479,509	+				-0.7
479,509	+				-0.1
479,515	+				-0.7
479,515	+				+1.2
479,575	+				+1.5
479,576	-				-0.6
479,587	+				+2.1
479,588	-				+0.6
479,599	-				-0.0
479,622	+				-1.7
479,624	+				+0.5
479,625	-				-1.3
479,647	-				-0.0
479,655	+				-0.0
479,691	+				-0.3
479,703	+				+0.1
479,719	+				-0.6
479,735	-				+1.4
479,735	-				-0.3
479,736	+				+3.7
479,736	+				-1.9
479,737	-				+0.5
479,742	+				-0.6
479,743	-				-0.7
479,816	+				+0.5
479,817	-				-0.1
479,936	+				+0.5
479,936	+				-0.3
479,937	-				+0.8
479,937	-				-0.5
479,937	-				-0.6
479,938	+				-0.8
479,938	+				-2.5
479,938	+				-0.5
479,938	+				+0.0
479,938	+				+0.8
479,939	-				+0.3
479,939	-				-1.3
479,939	-				-0.2
480,026	+				-0.6
480,026	+				-0.6
480,026	+				+0.3
480,026	+				+0.8
480,026	+				+0.9
480,027	-				+0.2
480,030	-				+1.3
480,035	+				-0.1
480,035	+				-1.4
480,042	+				+0.0
480,045	+				-0.5
480,046	-				-0.4
480,046	-				-1.7
480,046	-				+0.5
480,049	-				-0.8
480,065	+				+0.2
480,065	+				+0.5
480,089	+				-0.2
480,099	+				+1.1
480,100	-				+0.4
480,100	-				-0.4
480,140	-		Echvi_0441	0.11	-0.6
480,150	-		Echvi_0441	0.11	-0.7
480,151	+		Echvi_0441	0.11	-0.1
480,156	+		Echvi_0441	0.12	-0.7
480,157	-		Echvi_0441	0.12	+0.1