Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0293
Experiment: m.b. Carbenicillin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Carbenicillin 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
302,900 | + | +2.1 | |||
302,900 | + | +0.9 | |||
302,903 | + | -0.7 | |||
302,903 | + | +3.3 | |||
302,903 | + | +2.8 | |||
302,939 | - | -1.1 | |||
302,985 | + | +1.2 | |||
302,985 | + | +1.5 | |||
302,985 | + | +2.6 | |||
302,985 | + | +1.4 | |||
302,987 | + | +1.6 | |||
302,994 | + | +0.7 | |||
302,994 | + | +2.3 | |||
302,994 | + | +2.8 | |||
302,994 | + | +1.6 | |||
302,994 | + | +1.5 | |||
303,049 | + | +1.9 | |||
303,144 | + | Echvi_0293 | 0.11 | -0.5 | |
303,144 | + | Echvi_0293 | 0.11 | +1.5 | |
303,144 | + | Echvi_0293 | 0.11 | -0.6 | |
303,146 | + | +5.3 | |||
303,146 | + | Echvi_0293 | 0.12 | +0.5 | |
303,146 | + | Echvi_0293 | 0.12 | +1.6 | |
303,191 | + | Echvi_0293 | 0.18 | -0.2 | |
303,461 | + | Echvi_0293 | 0.59 | +2.4 | |
303,465 | + | Echvi_0293 | 0.59 | +1.3 | |
303,713 | + | +0.2 |
Or see this region's nucleotide sequence